RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 DDX10Q13206 875 aaKnown RBP6.21□□□□□ -1.42
SEC22B-202ENST00000618538 C3orf67Q6ZVT6 689 aa6.21□□□□□ -1.42
SEC22B-202ENST00000618538 IFNL1Q8IU54 200 aa6.21□□□□□ -1.42
SEC22B-202ENST00000618538 MARVELD3Q96A59 401 aa6.21□□□□□ -1.42
SEC22B-202ENST00000618538 FAM212AQ96EL1 285 aa6.21□□□□□ -1.42
SEC22B-202ENST00000618538 HS3ST6Q96QI5 342 aa6.21□□□□□ -1.42
SEC22B-202ENST00000618538 CDK13Q14004 1512 aaKnown RBP6.2□□□□□ -1.42
SEC22B-202ENST00000618538 WDR62O43379 1518 aa6.19□□□□□ -1.42
SEC22B-202ENST00000618538 IQGAP2Q13576 1575 aa6.19□□□□□ -1.42
SEC22B-202ENST00000618538 TCOF1Q13428 1488 aaKnown RBP6.19□□□□□ -1.42
SEC22B-202ENST00000618538 GCC2Q8IWJ2 1684 aa6.19□□□□□ -1.42
SEC22B-202ENST00000618538 EPRSP07814 1512 aaKnown RBP6.19□□□□□ -1.42
SEC22B-202ENST00000618538 HECW1Q76N89 1606 aa6.18□□□□□ -1.42
SEC22B-202ENST00000618538 ZNF608Q9ULD9 1512 aaPredicted RBP6.18□□□□□ -1.42
SEC22B-202ENST00000618538 TIMELESSQ9UNS1 1208 aa6.18□□□□□ -1.42
SEC22B-202ENST00000618538 MRC2Q9UBG0 1479 aa6.16□□□□□ -1.42
SEC22B-202ENST00000618538 NUBP1P53384 320 aa6.16□□□□□ -1.42
SEC22B-202ENST00000618538 RNF166Q96A37 237 aaPredicted RBP6.16□□□□□ -1.42
SEC22B-202ENST00000618538 DISP1Q96F81 1524 aa6.16□□□□□ -1.42
SEC22B-202ENST00000618538 ARID3CA6NKF2 412 aa6.15□□□□□ -1.42
SEC22B-202ENST00000618538 RRP7BPQ9NSQ0 103 aa6.15□□□□□ -1.42
SEC22B-202ENST00000618538 TONSLQ96HA7 1378 aa6.15□□□□□ -1.42
SEC22B-202ENST00000618538 FAM205CA6NFA0 338 aa6.15□□□□□ -1.43
SEC22B-202ENST00000618538 CHIC2Q9UKJ5 165 aa6.15□□□□□ -1.43
SEC22B-202ENST00000618538 AKNAQ7Z591 1439 aa6.14□□□□□ -1.43
SEC22B-202ENST00000618538 NUP153P49790 1475 aaKnown RBP6.14□□□□□ -1.43
SEC22B-202ENST00000618538 KIAA0556O60303 1618 aa6.14□□□□□ -1.43
SEC22B-202ENST00000618538 PLCD3Q8N3E9 789 aa6.14□□□□□ -1.43
SEC22B-202ENST00000618538 MIA2Q96PC5 1412 aa6.13□□□□□ -1.43
SEC22B-202ENST00000618538 EIF4G3O43432 1585 aaKnown RBP6.12□□□□□ -1.43
SEC22B-202ENST00000618538 ZNF644Q9H582 1327 aaPredicted RBP6.12□□□□□ -1.43
SEC22B-202ENST00000618538 TSHZ2Q9NRE2 1034 aa6.12□□□□□ -1.43
SEC22B-202ENST00000618538 DNMT1P26358 1616 aaKnown RBP6.12□□□□□ -1.43
SEC22B-202ENST00000618538 ABCC5O15440 1437 aa6.12□□□□□ -1.43
SEC22B-202ENST00000618538 DAPK1P53355 1430 aa6.12□□□□□ -1.43
SEC22B-202ENST00000618538 WASHC2AQ641Q2 1341 aa6.12□□□□□ -1.43
SEC22B-202ENST00000618538 KIAA0586Q9BVV6 1533 aa6.11□□□□□ -1.43
SEC22B-202ENST00000618538 GRIN2AQ12879 1464 aa6.11□□□□□ -1.43
SEC22B-202ENST00000618538 TEX14Q8IWB6 1497 aa6.11□□□□□ -1.43
SEC22B-202ENST00000618538 IFT140Q96RY7 1462 aa6.11□□□□□ -1.43
SEC22B-202ENST00000618538 CCER2I3L3R5 266 aa6.11□□□□□ -1.43
SEC22B-202ENST00000618538 TRIM52Q96A61 297 aa6.11□□□□□ -1.43
SEC22B-202ENST00000618538 RAPGEF6Q8TEU7 1601 aa6.11□□□□□ -1.43
SEC22B-202ENST00000618538 POTEB3A0JP26 581 aa6.1□□□□□ -1.43
SEC22B-202ENST00000618538 HOXB1P14653 301 aaPredicted RBP6.1□□□□□ -1.43
SEC22B-202ENST00000618538 POTEBQ6S5H4 581 aa6.1□□□□□ -1.43
SEC22B-202ENST00000618538 BCANQ96GW7 911 aa6.1□□□□□ -1.43
SEC22B-202ENST00000618538 MYT1LQ9UL68 1186 aa6.1□□□□□ -1.43
SEC22B-202ENST00000618538 CEP170Q5SW79 1584 aa6.1□□□□□ -1.43
SEC22B-202ENST00000618538 C11orf95C9JLR9 678 aaPredicted RBP6.1□□□□□ -1.43
SEC22B-202ENST00000618538 HSPA5P11021 654 aaKnown RBP6.1□□□□□ -1.43
SEC22B-202ENST00000618538 MKRN3Q13064 507 aaKnown RBP6.1□□□□□ -1.43
SEC22B-202ENST00000618538 MPHOSPH9Q99550 1183 aa6.1□□□□□ -1.43
SEC22B-202ENST00000618538 KIF14Q15058 1648 aa6.09□□□□□ -1.43
SEC22B-202ENST00000618538 GOLGA2Q08379 1002 aa6.09□□□□□ -1.43
SEC22B-202ENST00000618538 DOK7Q18PE1 504 aa6.09□□□□□ -1.43
SEC22B-202ENST00000618538 PDCD7Q8N8D1 485 aaKnown RBP6.09□□□□□ -1.43
SEC22B-202ENST00000618538 PRG4Q92954 1404 aaPredicted RBP6.09□□□□□ -1.43
SEC22B-202ENST00000618538 ANKRD30BQ9BXX2 1392 aa6.09□□□□□ -1.43
SEC22B-202ENST00000618538 PZPP20742 1482 aa6.09□□□□□ -1.43
SEC22B-202ENST00000618538 PLB1Q6P1J6 1458 aa6.09□□□□□ -1.43
SEC22B-202ENST00000618538 ANP32CO43423 234 aa6.09□□□□□ -1.44
SEC22B-202ENST00000618538 FKBP8Q14318 412 aa6.09□□□□□ -1.44
SEC22B-202ENST00000618538 NBPF8Q3BBV2 869 aa6.09□□□□□ -1.44
SEC22B-202ENST00000618538 L3MBTL2Q969R5 705 aa6.09□□□□□ -1.44
SEC22B-202ENST00000618538 ROCK1Q13464 1354 aa6.08□□□□□ -1.44
SEC22B-202ENST00000618538 RPRD2Q5VT52 1461 aaKnown RBP6.08□□□□□ -1.44
SEC22B-202ENST00000618538 CCDC184Q52MB2 194 aa6.08□□□□□ -1.44
SEC22B-202ENST00000618538 ZNF467Q7Z7K2 595 aaPredicted RBP6.08□□□□□ -1.44
SEC22B-202ENST00000618538 RIMBP2O15034 1052 aa6.07□□□□□ -1.44
SEC22B-202ENST00000618538 CAMSAP2Q08AD1 1489 aa6.07□□□□□ -1.44
SEC22B-202ENST00000618538 NCOA1Q15788 1441 aa6.07□□□□□ -1.44
SEC22B-202ENST00000618538 SPATA31E1Q6ZUB1 1445 aa6.07□□□□□ -1.44
SEC22B-202ENST00000618538 ADCY10Q96PN6 1610 aa6.07□□□□□ -1.44
SEC22B-202ENST00000618538 CROCC2H7BZ55 1655 aa6.06□□□□□ -1.44
SEC22B-202ENST00000618538 MBD5Q9P267 1494 aa6.06□□□□□ -1.44
SEC22B-202ENST00000618538 G3V3G9 751 aa6.06□□□□□ -1.44
SEC22B-202ENST00000618538 DCAF8Q5TAQ9 597 aa6.06□□□□□ -1.44
SEC22B-202ENST00000618538 GPATCH8Q9UKJ3 1502 aaKnown RBP6.06□□□□□ -1.44
SEC22B-202ENST00000618538 TROQ12816 1431 aaPredicted RBP6.06□□□□□ -1.44
SEC22B-202ENST00000618538 CNTLNQ9NXG0 1405 aa6.06□□□□□ -1.44
SEC22B-202ENST00000618538 ZNF710Q8N1W2 664 aa6.06□□□□□ -1.44
SEC22B-202ENST00000618538 ZSWIM6Q9HCJ5 1215 aa6.06□□□□□ -1.44
SEC22B-202ENST00000618538 ERBB3P21860 1342 aa6.05□□□□□ -1.44
SEC22B-202ENST00000618538 CCDC7Q96M83 1385 aa6.05□□□□□ -1.44
SEC22B-202ENST00000618538 ADGBQ8N7X0 1667 aa6.05□□□□□ -1.44
SEC22B-202ENST00000618538 MAGI1Q96QZ7 1491 aaPredicted RBP6.05□□□□□ -1.44
SEC22B-202ENST00000618538 NUP160Q12769 1436 aa6.04□□□□□ -1.44
SEC22B-202ENST00000618538 SYNJ2O15056 1496 aa6.04□□□□□ -1.44
SEC22B-202ENST00000618538 ADGRL2O95490 1459 aa6.04□□□□□ -1.44
SEC22B-202ENST00000618538 ITSN2Q9NZM3 1697 aa6.04□□□□□ -1.44
SEC22B-202ENST00000618538 BCORL1Q5H9F3 1711 aa6.04□□□□□ -1.44
SEC22B-202ENST00000618538 CDC42BPAQ5VT25 1732 aa6.04□□□□□ -1.44
SEC22B-202ENST00000618538 ILDR1Q86SU0 546 aaPredicted RBP6.04□□□□□ -1.44
SEC22B-202ENST00000618538 POLR1AO95602 1720 aaPredicted RBP6.04□□□□□ -1.44
SEC22B-202ENST00000618538 EIF4G2P78344 907 aaKnown RBP eCLIP6.03□□□□□ -1.44
SEC22B-202ENST00000618538 ABCA8O94911 1581 aa6.03□□□□□ -1.44
SEC22B-202ENST00000618538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.03□□□□□ -1.44
SEC22B-202ENST00000618538 ABCC10Q5T3U5 1492 aa6.03□□□□□ -1.44
SEC22B-202ENST00000618538 KIF7Q2M1P5 1343 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms