RNA–Protein interactions for RNA: ENST00000618278.4

SLC6A6-207, Transcript of solute carrier family 6 member 6, humanhuman

TSL 5

Gene SLC6A6, Length 6,401 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-207ENST00000618278 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
SLC6A6-207ENST00000618278 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
SLC6A6-207ENST00000618278 TMF1P82094 1093 aa13.85□□□□□ -0.19
SLC6A6-207ENST00000618278 TTC5Q8N0Z6 440 aa13.85□□□□□ -0.19
SLC6A6-207ENST00000618278 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
SLC6A6-207ENST00000618278 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.84□□□□□ -0.19
SLC6A6-207ENST00000618278 CT47A1Q5JQC4 288 aaPredicted RBP13.84□□□□□ -0.19
SLC6A6-207ENST00000618278 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
SLC6A6-207ENST00000618278 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.19
SLC6A6-207ENST00000618278 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.19
SLC6A6-207ENST00000618278 USP35Q9P2H5 1018 aa13.83□□□□□ -0.2
SLC6A6-207ENST00000618278 SYNE3Q6ZMZ3 975 aa13.83□□□□□ -0.2
SLC6A6-207ENST00000618278 TSR1Q2NL82 804 aaKnown RBP13.82□□□□□ -0.2
SLC6A6-207ENST00000618278 GRM1Q13255 1194 aa13.82□□□□□ -0.2
SLC6A6-207ENST00000618278 CCDC27Q2M243 656 aa13.82□□□□□ -0.2
SLC6A6-207ENST00000618278 EIF4G1Q04637 1599 aaKnown RBP13.82□□□□□ -0.2
SLC6A6-207ENST00000618278 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
SLC6A6-207ENST00000618278 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
SLC6A6-207ENST00000618278 CCAR2Q8N163 923 aaKnown RBP13.79□□□□□ -0.2
SLC6A6-207ENST00000618278 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
SLC6A6-207ENST00000618278 H3BQV1 296 aa13.78□□□□□ -0.2
SLC6A6-207ENST00000618278 IFFO2Q5TF58 517 aa13.78□□□□□ -0.2
SLC6A6-207ENST00000618278 CYB5RLQ6IPT4 315 aa13.78□□□□□ -0.2
SLC6A6-207ENST00000618278 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
SLC6A6-207ENST00000618278 ATF3P18847 181 aa13.77□□□□□ -0.2
SLC6A6-207ENST00000618278 PSME1Q06323 249 aa13.77□□□□□ -0.21
SLC6A6-207ENST00000618278 EIF2S2P20042 333 aaKnown RBP13.77□□□□□ -0.21
SLC6A6-207ENST00000618278 KDM4AO75164 1064 aa13.76□□□□□ -0.21
SLC6A6-207ENST00000618278 NECTIN2Q92692 538 aa13.76□□□□□ -0.21
SLC6A6-207ENST00000618278 PLIN1O60240 522 aa13.76□□□□□ -0.21
SLC6A6-207ENST00000618278 IPO8O15397 1037 aaKnown RBP13.76□□□□□ -0.21
SLC6A6-207ENST00000618278 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
SLC6A6-207ENST00000618278 CA8P35219 290 aa13.76□□□□□ -0.21
SLC6A6-207ENST00000618278 RBM5P52756 815 aaKnown RBP eCLIP13.76□□□□□ -0.21
SLC6A6-207ENST00000618278 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
SLC6A6-207ENST00000618278 TNNT3P45378 269 aaPredicted RBP13.75□□□□□ -0.21
SLC6A6-207ENST00000618278 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
SLC6A6-207ENST00000618278 ATP2B2Q01814 1243 aa13.74□□□□□ -0.21
SLC6A6-207ENST00000618278 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
SLC6A6-207ENST00000618278 RRP12Q5JTH9 1297 aaKnown RBP13.73□□□□□ -0.21
SLC6A6-207ENST00000618278 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
SLC6A6-207ENST00000618278 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
SLC6A6-207ENST00000618278 WASHC2AQ641Q2 1341 aa13.73□□□□□ -0.21
SLC6A6-207ENST00000618278 TTLL12Q14166 644 aaPredicted RBP13.72□□□□□ -0.21
SLC6A6-207ENST00000618278 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
SLC6A6-207ENST00000618278 NAP1L1P55209 391 aaKnown RBP13.72□□□□□ -0.21
SLC6A6-207ENST00000618278 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
SLC6A6-207ENST00000618278 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
SLC6A6-207ENST00000618278 MAP3K9P80192 1104 aa13.72□□□□□ -0.21
SLC6A6-207ENST00000618278 MPHOSPH10O00566 681 aaKnown RBP13.72□□□□□ -0.21
SLC6A6-207ENST00000618278 TRIM29Q14134 588 aa13.72□□□□□ -0.21
SLC6A6-207ENST00000618278 RILPL2Q969X0 211 aa13.71□□□□□ -0.21
SLC6A6-207ENST00000618278 CCDC47Q96A33 483 aaKnown RBP13.71□□□□□ -0.21
SLC6A6-207ENST00000618278 GZF1Q9H116 711 aaPredicted RBP13.71□□□□□ -0.21
SLC6A6-207ENST00000618278 KIF16BQ96L93 1317 aa13.71□□□□□ -0.21
SLC6A6-207ENST00000618278 FOSBP53539 338 aa13.71□□□□□ -0.21
SLC6A6-207ENST00000618278 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
SLC6A6-207ENST00000618278 ZCCHC6Q5VYS8 1495 aaKnown RBP13.71□□□□□ -0.22
SLC6A6-207ENST00000618278 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
SLC6A6-207ENST00000618278 TEFQ10587 303 aa13.7□□□□□ -0.22
SLC6A6-207ENST00000618278 STRN4Q9NRL3 753 aa13.7□□□□□ -0.22
SLC6A6-207ENST00000618278 FOXD4L6Q3SYB3 417 aaPredicted RBP13.69□□□□□ -0.22
SLC6A6-207ENST00000618278 FOXD4L3Q6VB84 417 aaPredicted RBP13.69□□□□□ -0.22
SLC6A6-207ENST00000618278 CCNB3Q8WWL7 1395 aa13.69□□□□□ -0.22
SLC6A6-207ENST00000618278 ERICH2A1L162 156 aa13.69□□□□□ -0.22
SLC6A6-207ENST00000618278 EPS15P42566 896 aa13.69□□□□□ -0.22
SLC6A6-207ENST00000618278 HMMRO75330 724 aa13.68□□□□□ -0.22
SLC6A6-207ENST00000618278 TPM1P09493 284 aa13.67□□□□□ -0.22
SLC6A6-207ENST00000618278 KIF3BO15066 747 aa13.67□□□□□ -0.22
SLC6A6-207ENST00000618278 NEXNQ0ZGT2 675 aa13.67□□□□□ -0.22
SLC6A6-207ENST00000618278 NEBLO76041 1014 aa13.66□□□□□ -0.22
SLC6A6-207ENST00000618278 MFAP1P55081 439 aaKnown RBP13.66□□□□□ -0.22
SLC6A6-207ENST00000618278 SMC4Q9NTJ3 1288 aa13.66□□□□□ -0.22
SLC6A6-207ENST00000618278 WDHD1O75717 1129 aaPredicted RBP13.66□□□□□ -0.22
SLC6A6-207ENST00000618278 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
SLC6A6-207ENST00000618278 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
SLC6A6-207ENST00000618278 MATR3P43243 847 aaKnown RBP eCLIP13.65□□□□□ -0.22
SLC6A6-207ENST00000618278 SLKQ9H2G2 1235 aaPredicted RBP13.65□□□□□ -0.22
SLC6A6-207ENST00000618278 TERF2IPQ9NYB0 399 aa13.65□□□□□ -0.22
SLC6A6-207ENST00000618278 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
SLC6A6-207ENST00000618278 NUTM2GQ5VZR2 741 aa13.64□□□□□ -0.23
SLC6A6-207ENST00000618278 CCDC70Q6NSX1 233 aa13.64□□□□□ -0.23
SLC6A6-207ENST00000618278 SYAP1Q96A49 352 aaPredicted RBP13.64□□□□□ -0.23
SLC6A6-207ENST00000618278 SETQ01105 290 aaPredicted RBP13.64□□□□□ -0.23
SLC6A6-207ENST00000618278 ELL2O00472 640 aaPredicted RBP13.64□□□□□ -0.23
SLC6A6-207ENST00000618278 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
SLC6A6-207ENST00000618278 KIF3AQ9Y496 699 aa13.63□□□□□ -0.23
SLC6A6-207ENST00000618278 SKIDA1Q1XH10 827 aa13.63□□□□□ -0.23
SLC6A6-207ENST00000618278 CLIP1P30622 1438 aa13.62□□□□□ -0.23
SLC6A6-207ENST00000618278 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
SLC6A6-207ENST00000618278 HOMER1Q86YM7 354 aa13.62□□□□□ -0.23
SLC6A6-207ENST00000618278 AIMP1Q12904 312 aaKnown RBP13.61□□□□□ -0.23
SLC6A6-207ENST00000618278 TRDNQ13061 729 aa13.61□□□□□ -0.23
SLC6A6-207ENST00000618278 WDR78Q5VTH9 848 aa13.61□□□□□ -0.23
SLC6A6-207ENST00000618278 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
SLC6A6-207ENST00000618278 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
SLC6A6-207ENST00000618278 RSPH4AQ5TD94 716 aa13.6□□□□□ -0.23
SLC6A6-207ENST00000618278 CPLX1O14810 134 aa13.6□□□□□ -0.23
SLC6A6-207ENST00000618278 LRRFIP1Q32MZ4 808 aaKnown RBP13.6□□□□□ -0.23
SLC6A6-207ENST00000618278 CLUAP1Q96AJ1 413 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms