RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ERBINQ96RT1 1412 aa25.01■■□□□ 1.59
CNOT3-209ENST00000617930 RAPGEF3O95398 923 aa25■■□□□ 1.59
CNOT3-209ENST00000617930 RICTORQ6R327 1708 aa25■■□□□ 1.59
CNOT3-209ENST00000617930 FRMPD1Q5SYB0 1578 aa24.99■■□□□ 1.59
CNOT3-209ENST00000617930 GTF3C3Q9Y5Q9 886 aa24.98■■□□□ 1.59
CNOT3-209ENST00000617930 PKD2Q13563 968 aa24.97■■□□□ 1.59
CNOT3-209ENST00000617930 MAGI2Q86UL8 1455 aa24.97■■□□□ 1.59
CNOT3-209ENST00000617930 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
CNOT3-209ENST00000617930 HECW2Q9P2P5 1572 aa24.95■■□□□ 1.58
CNOT3-209ENST00000617930 TEX14Q8IWB6 1497 aa24.94■■□□□ 1.58
CNOT3-209ENST00000617930 MLH3Q9UHC1 1453 aa24.94■■□□□ 1.58
CNOT3-209ENST00000617930 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
CNOT3-209ENST00000617930 IQGAP3Q86VI3 1631 aa24.92■■□□□ 1.58
CNOT3-209ENST00000617930 DEPDC5O75140 1603 aa24.9■■□□□ 1.58
CNOT3-209ENST00000617930 NBPF8Q3BBV2 869 aa24.9■■□□□ 1.58
CNOT3-209ENST00000617930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.9■■□□□ 1.586e-9■■■■■ 28
CNOT3-209ENST00000617930 YTHDC1Q96MU7 727 aaKnown RBP24.9■■□□□ 1.58
CNOT3-209ENST00000617930 DHX29Q7Z478 1369 aaKnown RBP24.89■■□□□ 1.58
CNOT3-209ENST00000617930 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.57
CNOT3-209ENST00000617930 MYT1LQ9UL68 1186 aa24.89■■□□□ 1.57
CNOT3-209ENST00000617930 MROH1Q8NDA8 1641 aa24.89■■□□□ 1.57
CNOT3-209ENST00000617930 COL17A1Q9UMD9 1497 aaPredicted RBP24.87■■□□□ 1.57
CNOT3-209ENST00000617930 DIP2CQ9Y2E4 1556 aa24.86■■□□□ 1.57
CNOT3-209ENST00000617930 YEATS2Q9ULM3 1422 aa24.86■■□□□ 1.57
CNOT3-209ENST00000617930 EIF2AK4Q9P2K8 1649 aaKnown RBP24.85■■□□□ 1.57
CNOT3-209ENST00000617930 A2MP01023 1474 aa24.85■■□□□ 1.57
CNOT3-209ENST00000617930 VWDEQ8N2E2 1590 aa24.82■■□□□ 1.56
CNOT3-209ENST00000617930 DNAJC5Q9H3Z4 198 aa24.82■■□□□ 1.56
CNOT3-209ENST00000617930 KIF3BO15066 747 aa24.81■■□□□ 1.56
CNOT3-209ENST00000617930 PLA2R1Q13018 1463 aa24.81■■□□□ 1.56
CNOT3-209ENST00000617930 ZMYM4Q5VZL5 1548 aa24.8■■□□□ 1.56
CNOT3-209ENST00000617930 HSPA5P11021 654 aaKnown RBP24.8■■□□□ 1.56
CNOT3-209ENST00000617930 PRDM15P57071 1507 aaPredicted RBP24.8■■□□□ 1.56
CNOT3-209ENST00000617930 RNF17Q9BXT8 1623 aaKnown RBP24.77■■□□□ 1.56
CNOT3-209ENST00000617930 E9PCH4 1651 aa24.77■■□□□ 1.56
CNOT3-209ENST00000617930 BCORL1Q5H9F3 1711 aa24.75■■□□□ 1.55
CNOT3-209ENST00000617930 SIGLEC1Q9BZZ2 1709 aa24.71■■□□□ 1.55
CNOT3-209ENST00000617930 TET3O43151 1660 aa24.71■■□□□ 1.55
CNOT3-209ENST00000617930 EIF4G2P78344 907 aaKnown RBP eCLIP24.71■■□□□ 1.55
CNOT3-209ENST00000617930 CEP152O94986 1710 aa24.7■■□□□ 1.54
CNOT3-209ENST00000617930 WASHC2AQ641Q2 1341 aa24.7■■□□□ 1.54
CNOT3-209ENST00000617930 C11orf95C9JLR9 678 aaPredicted RBP24.69■■□□□ 1.54
CNOT3-209ENST00000617930 SPATA31E1Q6ZUB1 1445 aa24.67■■□□□ 1.54
CNOT3-209ENST00000617930 ATP10AO60312 1499 aa24.67■■□□□ 1.54
CNOT3-209ENST00000617930 LMTK2Q8IWU2 1503 aa24.64■■□□□ 1.53
CNOT3-209ENST00000617930 GGT6Q6P531 493 aa24.63■■□□□ 1.53
CNOT3-209ENST00000617930 EFCAB6Q5THR3 1501 aa24.63■■□□□ 1.53
CNOT3-209ENST00000617930 KANK1Q14678 1352 aa24.62■■□□□ 1.53
CNOT3-209ENST00000617930 SPHKAPQ2M3C7 1700 aa24.61■■□□□ 1.53
CNOT3-209ENST00000617930 UHRF1BP1Q6BDS2 1440 aa24.61■■□□□ 1.53
CNOT3-209ENST00000617930 ZNF326Q5BKZ1 582 aaKnown RBP24.61■■□□□ 1.53
CNOT3-209ENST00000617930 PTPRTO14522 1441 aa24.6■■□□□ 1.53
CNOT3-209ENST00000617930 ABCC3O15438 1527 aa24.6■■□□□ 1.53
CNOT3-209ENST00000617930 CCDC144AA2RUR9 1427 aa24.6■■□□□ 1.53
CNOT3-209ENST00000617930 ARHGEF40Q8TER5 1519 aa24.59■■□□□ 1.53
CNOT3-209ENST00000617930 TRPM2O94759 1503 aa24.58■■□□□ 1.53
CNOT3-209ENST00000617930 REREQ9P2R6 1566 aa24.58■■□□□ 1.53
CNOT3-209ENST00000617930 CLTCL1P53675 1640 aa24.57■■□□□ 1.52
CNOT3-209ENST00000617930 TRHP20396 242 aaPredicted RBP24.57■■□□□ 1.52
CNOT3-209ENST00000617930 KDM2AQ9Y2K7 1162 aa24.56■■□□□ 1.52
CNOT3-209ENST00000617930 UGGT1Q9NYU2 1555 aa24.56■■□□□ 1.52
CNOT3-209ENST00000617930 DCAF11Q8TEB1 546 aa24.56■■□□□ 1.52
CNOT3-209ENST00000617930 NPATQ14207 1427 aa24.55■■□□□ 1.52
CNOT3-209ENST00000617930 CAMSAP1Q5T5Y3 1602 aa24.53■■□□□ 1.52
CNOT3-209ENST00000617930 CCDC7Q96M83 1385 aa24.53■■□□□ 1.52
CNOT3-209ENST00000617930 CFAP65Q6ZU64 1925 aaKnown RBP24.52■■□□□ 1.52
CNOT3-209ENST00000617930 AGLP35573 1532 aa24.52■■□□□ 1.51
CNOT3-209ENST00000617930 RALGAPBQ86X10 1494 aa24.5■■□□□ 1.51
CNOT3-209ENST00000617930 ANP32CO43423 234 aa24.49■■□□□ 1.51
CNOT3-209ENST00000617930 RGL3Q3MIN7 710 aa24.49■■□□□ 1.51
CNOT3-209ENST00000617930 USP47Q96K76 1375 aa24.49■■□□□ 1.51
CNOT3-209ENST00000617930 WASHC2CQ9Y4E1 1318 aa24.49■■□□□ 1.51
CNOT3-209ENST00000617930 KIF7Q2M1P5 1343 aa24.48■■□□□ 1.51
CNOT3-209ENST00000617930 ZC3H13Q5T200 1668 aaKnown RBP24.46■■□□□ 1.51
CNOT3-209ENST00000617930 CCER2I3L3R5 266 aa24.44■■□□□ 1.5
CNOT3-209ENST00000617930 PRAG1Q86YV5 1406 aa24.43■■□□□ 1.5
CNOT3-209ENST00000617930 MROH2AA6NES4 1674 aa24.42■■□□□ 1.5
CNOT3-209ENST00000617930 CNTLNQ9NXG0 1405 aa24.42■■□□□ 1.5
CNOT3-209ENST00000617930 CARD11Q9BXL7 1154 aa24.42■■□□□ 1.5
CNOT3-209ENST00000617930 SYNMO15061 1565 aa24.41■■□□□ 1.5
CNOT3-209ENST00000617930 NOS1P29475 1434 aa24.4■■□□□ 1.5
CNOT3-209ENST00000617930 ARHGAP31Q2M1Z3 1444 aa24.39■■□□□ 1.5
CNOT3-209ENST00000617930 NBPF1Q3BBV0 1214 aa24.39■■□□□ 1.49
CNOT3-209ENST00000617930 CLTCQ00610 1675 aaKnown RBP24.38■■□□□ 1.49
CNOT3-209ENST00000617930 MLECQ14165 292 aa24.38■■□□□ 1.49
CNOT3-209ENST00000617930 PIK3C2BO00750 1634 aa24.35■■□□□ 1.49
CNOT3-209ENST00000617930 TRPM1Q7Z4N2 1603 aa24.35■■□□□ 1.49
CNOT3-209ENST00000617930 ST20-MTHFSA0A0A6YYL1 179 aa24.35■■□□□ 1.49
CNOT3-209ENST00000617930 PREX1Q8TCU6 1659 aa24.35■■□□□ 1.49
CNOT3-209ENST00000617930 POLR1AO95602 1720 aaPredicted RBP24.34■■□□□ 1.49
CNOT3-209ENST00000617930 KIF1BO60333 1816 aa24.34■■□□□ 1.49
CNOT3-209ENST00000617930 ROCK2O75116 1388 aaKnown RBP24.34■■□□□ 1.49
CNOT3-209ENST00000617930 NEURL4Q96JN8 1562 aa24.33■■□□□ 1.49
CNOT3-209ENST00000617930 ADGRB3O60242 1522 aa24.33■■□□□ 1.49
CNOT3-209ENST00000617930 FBXO31Q5XUX0 539 aaPredicted RBP24.32■■□□□ 1.48
CNOT3-209ENST00000617930 MADDQ8WXG6 1647 aa24.31■■□□□ 1.48
CNOT3-209ENST00000617930 IFT172Q9UG01 1749 aa24.3■■□□□ 1.48
CNOT3-209ENST00000617930 GPRASP1Q5JY77 1395 aa24.3■■□□□ 1.48
CNOT3-209ENST00000617930 CCDC184Q52MB2 194 aa24.28■■□□□ 1.48
CNOT3-209ENST00000617930 ERVK-7P63135 1459 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms