RNA–Protein interactions for RNA: ENST00000617797.1

CUL1-204, Transcript of cullin 1, humanhuman

TSL 1 (best) BASIC

Gene CUL1, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-204ENST00000617797 L3MBTL2Q969R5 705 aa9.18□□□□□ -0.94
CUL1-204ENST00000617797 UHRF1BP1LA0JNW5 1464 aa9.18□□□□□ -0.94
CUL1-204ENST00000617797 MAST1Q9Y2H9 1570 aa9.18□□□□□ -0.94
CUL1-204ENST00000617797 TSPY4P0CV99 314 aa9.17□□□□□ -0.94
CUL1-204ENST00000617797 TSPY10P0CW01 314 aa9.17□□□□□ -0.94
CUL1-204ENST00000617797 KDM2AQ9Y2K7 1162 aa9.17□□□□□ -0.94
CUL1-204ENST00000617797 KIF15Q9NS87 1388 aa9.16□□□□□ -0.94
CUL1-204ENST00000617797 POLR1AO95602 1720 aaPredicted RBP9.16□□□□□ -0.94
CUL1-204ENST00000617797 HSPA5P11021 654 aaKnown RBP9.14□□□□□ -0.95
CUL1-204ENST00000617797 PLXNC1O60486 1568 aa9.14□□□□□ -0.95
CUL1-204ENST00000617797 PLEKHH2Q8IVE3 1493 aa9.14□□□□□ -0.95
CUL1-204ENST00000617797 NUP155O75694 1391 aa9.14□□□□□ -0.95
CUL1-204ENST00000617797 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
CUL1-204ENST00000617797 NBPF8Q3BBV2 869 aa9.13□□□□□ -0.95
CUL1-204ENST00000617797 KCNH8Q96L42 1107 aa9.13□□□□□ -0.95
CUL1-204ENST00000617797 UNC13BO14795 1591 aa9.13□□□□□ -0.95
CUL1-204ENST00000617797 EIF4G2P78344 907 aaKnown RBP eCLIP9.13□□□□□ -0.958e-7■■■□□ 16.1
CUL1-204ENST00000617797 PLCH2O75038 1416 aa9.12□□□□□ -0.95
CUL1-204ENST00000617797 ABCC1P33527 1531 aa9.11□□□□□ -0.95
CUL1-204ENST00000617797 ARHGEF12Q9NZN5 1544 aa9.11□□□□□ -0.95
CUL1-204ENST00000617797 FAM135AQ9P2D6 1515 aa9.11□□□□□ -0.95
CUL1-204ENST00000617797 ANP32CO43423 234 aa9.11□□□□□ -0.95
CUL1-204ENST00000617797 WASHC2AQ641Q2 1341 aa9.1□□□□□ -0.95
CUL1-204ENST00000617797 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.1□□□□□ -0.95
CUL1-204ENST00000617797 IQGAP3Q86VI3 1631 aa9.1□□□□□ -0.95
CUL1-204ENST00000617797 CCER2I3L3R5 266 aa9.09□□□□□ -0.95
CUL1-204ENST00000617797 ARAP3Q8WWN8 1544 aa9.09□□□□□ -0.95
CUL1-204ENST00000617797 DUOX2Q9NRD8 1548 aa9.09□□□□□ -0.96
CUL1-204ENST00000617797 BBXQ8WY36 941 aaPredicted RBP9.08□□□□□ -0.96
CUL1-204ENST00000617797 SPATA31E1Q6ZUB1 1445 aa9.08□□□□□ -0.96
CUL1-204ENST00000617797 EFCAB2Q5VUJ9 269 aa9.08□□□□□ -0.96
CUL1-204ENST00000617797 WDR7Q9Y4E6 1490 aa9.07□□□□□ -0.96
CUL1-204ENST00000617797 ABCA9Q8IUA7 1624 aa9.07□□□□□ -0.96
CUL1-204ENST00000617797 KDM5CP41229 1560 aa9.07□□□□□ -0.96
CUL1-204ENST00000617797 CCDC7Q96M83 1385 aa9.07□□□□□ -0.96
CUL1-204ENST00000617797 CNTLNQ9NXG0 1405 aa9.07□□□□□ -0.96
CUL1-204ENST00000617797 UHRF1BP1Q6BDS2 1440 aa9.06□□□□□ -0.96
CUL1-204ENST00000617797 TRAPPC8Q9Y2L5 1435 aa9.06□□□□□ -0.96
CUL1-204ENST00000617797 BCORL1Q5H9F3 1711 aa9.06□□□□□ -0.96
CUL1-204ENST00000617797 MAGI2Q86UL8 1455 aa9.06□□□□□ -0.96
CUL1-204ENST00000617797 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
CUL1-204ENST00000617797 ERBINQ96RT1 1412 aa9.06□□□□□ -0.96
CUL1-204ENST00000617797 C11orf95C9JLR9 678 aaPredicted RBP9.05□□□□□ -0.96
CUL1-204ENST00000617797 RALGAPBQ86X10 1494 aa9.05□□□□□ -0.96
CUL1-204ENST00000617797 ZNF326Q5BKZ1 582 aaKnown RBP9.04□□□□□ -0.96
CUL1-204ENST00000617797 ZFYVE16Q7Z3T8 1539 aa9.04□□□□□ -0.96
CUL1-204ENST00000617797 NPM1P06748 294 aaKnown RBP eCLIP9.04□□□□□ -0.96
CUL1-204ENST00000617797 CFAP44Q96MT7 982 aa9.04□□□□□ -0.96
CUL1-204ENST00000617797 USP47Q96K76 1375 aa9.03□□□□□ -0.96
CUL1-204ENST00000617797 INO80Q9ULG1 1556 aaPredicted RBP9.03□□□□□ -0.96
CUL1-204ENST00000617797 TRPM1Q7Z4N2 1603 aa9.03□□□□□ -0.96
CUL1-204ENST00000617797 KIF7Q2M1P5 1343 aa9.02□□□□□ -0.96
CUL1-204ENST00000617797 CCDC144AA2RUR9 1427 aa9.02□□□□□ -0.97
CUL1-204ENST00000617797 RTEL1-TNFRSF6BF6WH68 1400 aa9.02□□□□□ -0.97
CUL1-204ENST00000617797 FANCAO15360 1455 aa9.02□□□□□ -0.97
CUL1-204ENST00000617797 PLA2R1Q13018 1463 aa9.02□□□□□ -0.97
CUL1-204ENST00000617797 ASXL2Q76L83 1435 aa9.02□□□□□ -0.97
CUL1-204ENST00000617797 E9PCH4 1651 aa9.01□□□□□ -0.97
CUL1-204ENST00000617797 DEPDC5O75140 1603 aa9.01□□□□□ -0.97
CUL1-204ENST00000617797 ECM2O94769 699 aaPredicted RBP9.01□□□□□ -0.97
CUL1-204ENST00000617797 ATP7AQ04656 1500 aa9.01□□□□□ -0.97
CUL1-204ENST00000617797 SPAG9O60271 1321 aaKnown RBP9.01□□□□□ -0.97
CUL1-204ENST00000617797 OSCARQ8IYS5 282 aa9□□□□□ -0.97
CUL1-204ENST00000617797 DCAF11Q8TEB1 546 aa9□□□□□ -0.97
CUL1-204ENST00000617797 ATP10AO60312 1499 aa9□□□□□ -0.97
CUL1-204ENST00000617797 SPHKAPQ2M3C7 1700 aa8.99□□□□□ -0.97
CUL1-204ENST00000617797 AFAP1Q8N556 730 aa8.99□□□□□ -0.97
CUL1-204ENST00000617797 ADGRL1O94910 1474 aa8.99□□□□□ -0.97
CUL1-204ENST00000617797 CEP152O94986 1710 aa8.99□□□□□ -0.97
CUL1-204ENST00000617797 A2MP01023 1474 aa8.99□□□□□ -0.97
CUL1-204ENST00000617797 EIF2AK4Q9P2K8 1649 aaKnown RBP8.99□□□□□ -0.97
CUL1-204ENST00000617797 SPOCK2Q92563 424 aa8.98□□□□□ -0.97
CUL1-204ENST00000617797 CARD11Q9BXL7 1154 aa8.98□□□□□ -0.97
CUL1-204ENST00000617797 TET3O43151 1660 aa8.98□□□□□ -0.97
CUL1-204ENST00000617797 PRAG1Q86YV5 1406 aa8.98□□□□□ -0.97
CUL1-204ENST00000617797 LAMC1P11047 1609 aa8.98□□□□□ -0.97
CUL1-204ENST00000617797 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
CUL1-204ENST00000617797 SCAPERQ9BY12 1400 aa8.98□□□□□ -0.97
CUL1-204ENST00000617797 KIDINS220Q9ULH0 1771 aa8.98□□□□□ -0.97
CUL1-204ENST00000617797 PRKRIP1Q9H875 184 aaPredicted RBP8.97□□□□□ -0.97
CUL1-204ENST00000617797 CFAP74Q9C0B2 1584 aa8.97□□□□□ -0.97
CUL1-204ENST00000617797 RGL3Q3MIN7 710 aa8.96□□□□□ -0.97
CUL1-204ENST00000617797 VWDEQ8N2E2 1590 aa8.96□□□□□ -0.98
CUL1-204ENST00000617797 ARID4BQ4LE39 1312 aaPredicted RBP8.96□□□□□ -0.98
CUL1-204ENST00000617797 ROCK2O75116 1388 aaKnown RBP8.96□□□□□ -0.98
CUL1-204ENST00000617797 TRPM2O94759 1503 aa8.95□□□□□ -0.98
CUL1-204ENST00000617797 MROH1Q8NDA8 1641 aa8.95□□□□□ -0.98
CUL1-204ENST00000617797 SUPT16HQ9Y5B9 1047 aaKnown RBP8.95□□□□□ -0.98
CUL1-204ENST00000617797 CLTCL1P53675 1640 aa8.95□□□□□ -0.98
CUL1-204ENST00000617797 RNF17Q9BXT8 1623 aaKnown RBP8.95□□□□□ -0.98
CUL1-204ENST00000617797 DHX29Q7Z478 1369 aaKnown RBP8.95□□□□□ -0.98
CUL1-204ENST00000617797 POLA2Q14181 598 aa8.95□□□□□ -0.98
CUL1-204ENST00000617797 ARXQ96QS3 562 aa8.95□□□□□ -0.98
CUL1-204ENST00000617797 POLR3GLQ9BT43 218 aa8.95□□□□□ -0.98
CUL1-204ENST00000617797 CCDC184Q52MB2 194 aa8.94□□□□□ -0.98
CUL1-204ENST00000617797 PRDM15P57071 1507 aaPredicted RBP8.94□□□□□ -0.98
CUL1-204ENST00000617797 SPRYD3Q8NCJ5 442 aa8.94□□□□□ -0.98
CUL1-204ENST00000617797 GPRASP1Q5JY77 1395 aa8.93□□□□□ -0.98
CUL1-204ENST00000617797 ST20-MTHFSA0A0A6YYL1 179 aa8.93□□□□□ -0.98
CUL1-204ENST00000617797 TSHZ2Q9NRE2 1034 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms