RNA–Protein interactions for RNA: ENST00000617133.4

SEM1-217, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-217ENST00000617133 FECHP22830 423 aa10.35□□□□□ -0.75
SEM1-217ENST00000617133 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
SEM1-217ENST00000617133 C6orf132Q5T0Z8 1188 aa10.35□□□□□ -0.75
SEM1-217ENST00000617133 ST18O60284 1047 aa10.33□□□□□ -0.76
SEM1-217ENST00000617133 MAP2K5Q13163 448 aa10.33□□□□□ -0.76
SEM1-217ENST00000617133 AK7Q96M32 723 aa10.33□□□□□ -0.76
SEM1-217ENST00000617133 MINK1Q8N4C8 1332 aaPredicted RBP10.32□□□□□ -0.76
SEM1-217ENST00000617133 BCL2L12Q9HB09 334 aa10.31□□□□□ -0.76
SEM1-217ENST00000617133 IRF6O14896 467 aa10.29□□□□□ -0.76
SEM1-217ENST00000617133 BRPF1P55201 1214 aaPredicted RBP10.29□□□□□ -0.76
SEM1-217ENST00000617133 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
SEM1-217ENST00000617133 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
SEM1-217ENST00000617133 TRIM66O15016 1216 aa10.28□□□□□ -0.76
SEM1-217ENST00000617133 COL9A1P20849 921 aa10.27□□□□□ -0.77
SEM1-217ENST00000617133 MARVELD3Q96A59 401 aa10.27□□□□□ -0.77
SEM1-217ENST00000617133 ERBB3P21860 1342 aa10.27□□□□□ -0.77
SEM1-217ENST00000617133 PTPREP23469 700 aa10.26□□□□□ -0.77
SEM1-217ENST00000617133 EMP3P54852 163 aa10.26□□□□□ -0.77
SEM1-217ENST00000617133 FAM163AQ96GL9 167 aaPredicted RBP10.26□□□□□ -0.77
SEM1-217ENST00000617133 NEUROD2Q15784 382 aa10.25□□□□□ -0.77
SEM1-217ENST00000617133 VARS2Q5ST30 1063 aaKnown RBP10.25□□□□□ -0.77
SEM1-217ENST00000617133 PADI6Q6TGC4 694 aa10.25□□□□□ -0.77
SEM1-217ENST00000617133 RBM27Q9P2N5 1060 aaKnown RBP10.24□□□□□ -0.77
SEM1-217ENST00000617133 PPP1R3GB7ZBB8 358 aa10.23□□□□□ -0.77
SEM1-217ENST00000617133 TTC13Q8NBP0 860 aa10.23□□□□□ -0.77
SEM1-217ENST00000617133 PRSS12P56730 875 aa10.22□□□□□ -0.77
SEM1-217ENST00000617133 PDE4DQ08499 809 aa10.22□□□□□ -0.77
SEM1-217ENST00000617133 CDCA7LQ96GN5 454 aa10.22□□□□□ -0.77
SEM1-217ENST00000617133 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
SEM1-217ENST00000617133 FAM161AQ3B820 660 aa10.21□□□□□ -0.77
SEM1-217ENST00000617133 LCE2DQ5TA82 110 aaPredicted RBP10.21□□□□□ -0.77
SEM1-217ENST00000617133 FAM205CA6NFA0 338 aa10.2□□□□□ -0.78
SEM1-217ENST00000617133 AMHR2Q16671 573 aa10.2□□□□□ -0.78
SEM1-217ENST00000617133 GPBP1L1Q9HC44 474 aaPredicted RBP10.2□□□□□ -0.78
SEM1-217ENST00000617133 FAM198AQ9UFP1 575 aa10.19□□□□□ -0.78
SEM1-217ENST00000617133 ADGRG1Q9Y653 693 aa10.19□□□□□ -0.78
SEM1-217ENST00000617133 PSEN2P49810 448 aa10.18□□□□□ -0.78
SEM1-217ENST00000617133 POTEEQ6S8J3 1075 aa10.18□□□□□ -0.78
SEM1-217ENST00000617133 KCNH8Q96L42 1107 aa10.18□□□□□ -0.78
SEM1-217ENST00000617133 TSKSQ9UJT2 592 aa10.18□□□□□ -0.78
SEM1-217ENST00000617133 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
SEM1-217ENST00000617133 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
SEM1-217ENST00000617133 PHOX2BQ99453 314 aa10.17□□□□□ -0.78
SEM1-217ENST00000617133 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
SEM1-217ENST00000617133 METTL3Q86U44 580 aaKnown RBP10.16□□□□□ -0.78
SEM1-217ENST00000617133 HS3ST6Q96QI5 342 aa10.16□□□□□ -0.78
SEM1-217ENST00000617133 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
SEM1-217ENST00000617133 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
SEM1-217ENST00000617133 OATP04181 439 aa10.15□□□□□ -0.78
SEM1-217ENST00000617133 PROX2Q3B8N5 592 aa10.15□□□□□ -0.78
SEM1-217ENST00000617133 PARP9Q8IXQ6 854 aa10.15□□□□□ -0.78
SEM1-217ENST00000617133 ZNF687Q8N1G0 1237 aa10.15□□□□□ -0.78
SEM1-217ENST00000617133 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.78
SEM1-217ENST00000617133 TTLL12Q14166 644 aaPredicted RBP10.14□□□□□ -0.79
SEM1-217ENST00000617133 PXYLP1Q8TE99 480 aa10.14□□□□□ -0.79
SEM1-217ENST00000617133 ZBED2Q9BTP6 218 aa10.14□□□□□ -0.79
SEM1-217ENST00000617133 PBX2P40425 430 aa10.13□□□□□ -0.79
SEM1-217ENST00000617133 DMRTA1Q5VZB9 504 aa10.13□□□□□ -0.79
SEM1-217ENST00000617133 C3orf80F5H4A9 247 aa10.12□□□□□ -0.79
SEM1-217ENST00000617133 RBM46Q8TBY0 533 aaKnown RBP10.12□□□□□ -0.79
SEM1-217ENST00000617133 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
SEM1-217ENST00000617133 NLRP7Q8WX94 980 aa10.11□□□□□ -0.79
SEM1-217ENST00000617133 REPIN1Q9BWE0 567 aaKnown RBP10.11□□□□□ -0.79
SEM1-217ENST00000617133 NBPF26B4DH59 902 aa10.1□□□□□ -0.79
SEM1-217ENST00000617133 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
SEM1-217ENST00000617133 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
SEM1-217ENST00000617133 NUDT18Q6ZVK8 323 aa10.1□□□□□ -0.79
SEM1-217ENST00000617133 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
SEM1-217ENST00000617133 EYA1Q99502 592 aa10.1□□□□□ -0.79
SEM1-217ENST00000617133 TMUB1Q9BVT8 246 aa10.1□□□□□ -0.79
SEM1-217ENST00000617133 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
SEM1-217ENST00000617133 TATDN2Q93075 761 aa10.09□□□□□ -0.79
SEM1-217ENST00000617133 SLC4A5Q9BY07 1137 aa10.09□□□□□ -0.79
SEM1-217ENST00000617133 PNMA3Q9UL41 463 aa10.09□□□□□ -0.79
SEM1-217ENST00000617133 CLCN1P35523 988 aa10.08□□□□□ -0.8
SEM1-217ENST00000617133 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
SEM1-217ENST00000617133 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
SEM1-217ENST00000617133 SMAPO00193 183 aa10.07□□□□□ -0.8
SEM1-217ENST00000617133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.06□□□□□ -0.8
SEM1-217ENST00000617133 RCCD1A6NED2 376 aa10.06□□□□□ -0.8
SEM1-217ENST00000617133 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
SEM1-217ENST00000617133 VPS9D1Q9Y2B5 631 aa10.06□□□□□ -0.8
SEM1-217ENST00000617133 FAM117AQ9C073 453 aa10.05□□□□□ -0.8
SEM1-217ENST00000617133 MS4A1P11836 297 aa10.04□□□□□ -0.8
SEM1-217ENST00000617133 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
SEM1-217ENST00000617133 DNAJB2P25686 324 aa10.03□□□□□ -0.8
SEM1-217ENST00000617133 FAM217BQ9NTX9 383 aaPredicted RBP10.02□□□□□ -0.81
SEM1-217ENST00000617133 SEPT9Q9UHD8 586 aaPredicted RBP10.02□□□□□ -0.81
SEM1-217ENST00000617133 PLEKHG3A1L390 1219 aa10.01□□□□□ -0.81
SEM1-217ENST00000617133 TK2O00142 265 aa10.01□□□□□ -0.81
SEM1-217ENST00000617133 SSTR3P32745 418 aaPredicted RBP10.01□□□□□ -0.81
SEM1-217ENST00000617133 LSM11P83369 360 aaKnown RBP eCLIP10.01□□□□□ -0.81
SEM1-217ENST00000617133 DDRGK1Q96HY6 314 aa10.01□□□□□ -0.81
SEM1-217ENST00000617133 TMEM134Q9H6X4 195 aa10□□□□□ -0.81
SEM1-217ENST00000617133 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
SEM1-217ENST00000617133 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
SEM1-217ENST00000617133 ADGRD1Q6QNK2 874 aa9.98□□□□□ -0.81
SEM1-217ENST00000617133 FAM98CQ17RN3 349 aaKnown RBP9.97□□□□□ -0.81
SEM1-217ENST00000617133 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
SEM1-217ENST00000617133 BEGAINQ9BUH8 593 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms