RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 PTPRTO14522 1441 aa24.8■■□□□ 1.56
SPTSSB-204ENST00000617024 PTPRKQ15262 1439 aa24.8■■□□□ 1.56
SPTSSB-204ENST00000617024 LTBP4Q8N2S1 1624 aa24.79■■□□□ 1.56
SPTSSB-204ENST00000617024 SPATA31D1Q6ZQQ2 1576 aa24.79■■□□□ 1.56
SPTSSB-204ENST00000617024 DHX29Q7Z478 1369 aaKnown RBP24.78■■□□□ 1.56
SPTSSB-204ENST00000617024 A2MP01023 1474 aa24.77■■□□□ 1.56
SPTSSB-204ENST00000617024 NCOA1Q15788 1441 aa24.77■■□□□ 1.56
SPTSSB-204ENST00000617024 AGLP35573 1532 aa24.76■■□□□ 1.55
SPTSSB-204ENST00000617024 ADGBQ8N7X0 1667 aa24.75■■□□□ 1.55
SPTSSB-204ENST00000617024 KIF15Q9NS87 1388 aa24.74■■□□□ 1.55
SPTSSB-204ENST00000617024 ADGRL2O95490 1459 aa24.74■■□□□ 1.55
SPTSSB-204ENST00000617024 PLXNC1O60486 1568 aa24.73■■□□□ 1.55
SPTSSB-204ENST00000617024 ROCK1Q13464 1354 aa24.73■■□□□ 1.55
SPTSSB-204ENST00000617024 DUOX2Q9NRD8 1548 aa24.7■■□□□ 1.54
SPTSSB-204ENST00000617024 KIF3BO15066 747 aa24.69■■□□□ 1.54
SPTSSB-204ENST00000617024 IQSEC2Q5JU85 1478 aa24.66■■□□□ 1.54
SPTSSB-204ENST00000617024 GGT6Q6P531 493 aa24.65■■□□□ 1.54
SPTSSB-204ENST00000617024 CAMSAP1Q5T5Y3 1602 aa24.63■■□□□ 1.53
SPTSSB-204ENST00000617024 MROH2AA6NES4 1674 aa24.62■■□□□ 1.53
SPTSSB-204ENST00000617024 ERBINQ96RT1 1412 aa24.62■■□□□ 1.53
SPTSSB-204ENST00000617024 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
SPTSSB-204ENST00000617024 ANKRD50Q9ULJ7 1429 aa24.61■■□□□ 1.53
SPTSSB-204ENST00000617024 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
SPTSSB-204ENST00000617024 ESF1Q9H501 851 aaKnown RBP24.61■■□□□ 1.53
SPTSSB-204ENST00000617024 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
SPTSSB-204ENST00000617024 NPATQ14207 1427 aa24.57■■□□□ 1.52
SPTSSB-204ENST00000617024 EIF2AK4Q9P2K8 1649 aaKnown RBP24.57■■□□□ 1.52
SPTSSB-204ENST00000617024 NAIPQ13075 1403 aa24.56■■□□□ 1.52
SPTSSB-204ENST00000617024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.55■■□□□ 1.52
SPTSSB-204ENST00000617024 HFM1A2PYH4 1435 aa24.54■■□□□ 1.52
SPTSSB-204ENST00000617024 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
SPTSSB-204ENST00000617024 ZMYM3Q14202 1370 aa24.54■■□□□ 1.52
SPTSSB-204ENST00000617024 ZNF142P52746 1687 aaPredicted RBP24.53■■□□□ 1.52
SPTSSB-204ENST00000617024 CLTCQ00610 1675 aaKnown RBP24.53■■□□□ 1.52
SPTSSB-204ENST00000617024 ZNF335Q9H4Z2 1342 aaPredicted RBP24.53■■□□□ 1.52
SPTSSB-204ENST00000617024 MYO3AQ8NEV4 1616 aa24.53■■□□□ 1.52
SPTSSB-204ENST00000617024 WASHC2CQ9Y4E1 1318 aa24.51■■□□□ 1.51
SPTSSB-204ENST00000617024 KANK1Q14678 1352 aa24.49■■□□□ 1.51
SPTSSB-204ENST00000617024 RNF17Q9BXT8 1623 aaKnown RBP24.48■■□□□ 1.51
SPTSSB-204ENST00000617024 SETD5Q9C0A6 1442 aa24.47■■□□□ 1.51
SPTSSB-204ENST00000617024 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
SPTSSB-204ENST00000617024 CEP170BQ9Y4F5 1589 aaPredicted RBP24.46■■□□□ 1.51
SPTSSB-204ENST00000617024 PLA2R1Q13018 1463 aa24.46■■□□□ 1.51
SPTSSB-204ENST00000617024 UBAP1LF5GYI3 381 aa24.44■■□□□ 1.5
SPTSSB-204ENST00000617024 TRIM52Q96A61 297 aa24.43■■□□□ 1.5
SPTSSB-204ENST00000617024 DEPDC5O75140 1603 aa24.42■■□□□ 1.5
SPTSSB-204ENST00000617024 ACIN1Q9UKV3 1341 aaKnown RBP24.41■■□□□ 1.5
SPTSSB-204ENST00000617024 MROH1Q8NDA8 1641 aa24.41■■□□□ 1.5
SPTSSB-204ENST00000617024 NUP155O75694 1391 aa24.41■■□□□ 1.5
SPTSSB-204ENST00000617024 FAM135AQ9P2D6 1515 aa24.4■■□□□ 1.5
SPTSSB-204ENST00000617024 PRDM15P57071 1507 aaPredicted RBP24.4■■□□□ 1.5
SPTSSB-204ENST00000617024 KDM5DQ9BY66 1539 aa24.4■■□□□ 1.5
SPTSSB-204ENST00000617024 PKD2Q13563 968 aa24.39■■□□□ 1.49
SPTSSB-204ENST00000617024 HRCP23327 699 aa24.37■■□□□ 1.49
SPTSSB-204ENST00000617024 RAB3GAP2Q9H2M9 1393 aa24.37■■□□□ 1.49
SPTSSB-204ENST00000617024 UNC13BO14795 1591 aa24.37■■□□□ 1.49
SPTSSB-204ENST00000617024 ABCC3O15438 1527 aa24.36■■□□□ 1.49
SPTSSB-204ENST00000617024 VWDEQ8N2E2 1590 aa24.34■■□□□ 1.49
SPTSSB-204ENST00000617024 ZC3H13Q5T200 1668 aaKnown RBP24.34■■□□□ 1.49
SPTSSB-204ENST00000617024 CEP152O94986 1710 aa24.32■■□□□ 1.48
SPTSSB-204ENST00000617024 LMTK2Q8IWU2 1503 aa24.31■■□□□ 1.48
SPTSSB-204ENST00000617024 PCGF6Q9BYE7 350 aa24.31■■□□□ 1.48
SPTSSB-204ENST00000617024 A2ML1A8K2U0 1454 aa24.31■■□□□ 1.48
SPTSSB-204ENST00000617024 POLR1AO95602 1720 aaPredicted RBP24.3■■□□□ 1.48
SPTSSB-204ENST00000617024 NEURL4Q96JN8 1562 aa24.3■■□□□ 1.48
SPTSSB-204ENST00000617024 MED1Q15648 1581 aaPredicted RBP24.29■■□□□ 1.48
SPTSSB-204ENST00000617024 IQGAP3Q86VI3 1631 aa24.28■■□□□ 1.48
SPTSSB-204ENST00000617024 FBXO31Q5XUX0 539 aaPredicted RBP24.28■■□□□ 1.48
SPTSSB-204ENST00000617024 SLC4A1APQ9BWU0 796 aaKnown RBP24.28■■□□□ 1.48
SPTSSB-204ENST00000617024 ARHGAP31Q2M1Z3 1444 aa24.27■■□□□ 1.48
SPTSSB-204ENST00000617024 HSPA1LP34931 641 aa24.27■■□□□ 1.48
SPTSSB-204ENST00000617024 PZPP20742 1482 aa24.26■■□□□ 1.47
SPTSSB-204ENST00000617024 MPHOSPH9Q99550 1183 aa24.24■■□□□ 1.47
SPTSSB-204ENST00000617024 TET3O43151 1660 aa24.24■■□□□ 1.47
SPTSSB-204ENST00000617024 CFAP65Q6ZU64 1925 aaKnown RBP24.23■■□□□ 1.47
SPTSSB-204ENST00000617024 CPS1P31327 1500 aa24.21■■□□□ 1.47
SPTSSB-204ENST00000617024 EFCAB6Q5THR3 1501 aa24.21■■□□□ 1.47
SPTSSB-204ENST00000617024 PIP4K2BP78356 416 aa24.21■■□□□ 1.47
SPTSSB-204ENST00000617024 ALKQ9UM73 1620 aa24.21■■□□□ 1.47
SPTSSB-204ENST00000617024 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
SPTSSB-204ENST00000617024 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
SPTSSB-204ENST00000617024 TNRQ92752 1358 aa24.18■■□□□ 1.46
SPTSSB-204ENST00000617024 ERVK-7P63135 1459 aa24.16■■□□□ 1.46
SPTSSB-204ENST00000617024 E9PCH4 1651 aa24.15■■□□□ 1.46
SPTSSB-204ENST00000617024 TOM1O60784 492 aa24.14■■□□□ 1.45
SPTSSB-204ENST00000617024 NOS1P29475 1434 aa24.12■■□□□ 1.45
SPTSSB-204ENST00000617024 FOXD1Q16676 465 aa24.12■■□□□ 1.45
SPTSSB-204ENST00000617024 STRCP1A6NGW2 1772 aa24.11■■□□□ 1.45
SPTSSB-204ENST00000617024 SLC52A1Q9NWF4 448 aa24.11■■□□□ 1.45
SPTSSB-204ENST00000617024 MED14O60244 1454 aa24.08■■□□□ 1.45
SPTSSB-204ENST00000617024 IDI1Q13907 227 aa24.08■■□□□ 1.45
SPTSSB-204ENST00000617024 UGGT1Q9NYU2 1555 aa24.07■■□□□ 1.44
SPTSSB-204ENST00000617024 IQGAP1P46940 1657 aa24.06■■□□□ 1.44
SPTSSB-204ENST00000617024 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
SPTSSB-204ENST00000617024 NPHP4O75161 1426 aaPredicted RBP24.06■■□□□ 1.44
SPTSSB-204ENST00000617024 NLRP1Q9C000 1473 aa24.06■■□□□ 1.44
SPTSSB-204ENST00000617024 STAG3Q9UJ98 1225 aa24.04■■□□□ 1.44
SPTSSB-204ENST00000617024 SYNMO15061 1565 aa24.03■■□□□ 1.44
SPTSSB-204ENST00000617024 THEMISQ8N1K5 641 aaPredicted RBP24.02■■□□□ 1.44
SPTSSB-204ENST00000617024 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms