RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 KTN1Q86UP2 1357 aaKnown RBP19.35■□□□□ 0.69
PRKD1-209ENST00000616995 CDCA7LQ96GN5 454 aa19.35■□□□□ 0.69
PRKD1-209ENST00000616995 SAFB2Q14151 953 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRKD1-209ENST00000616995 PLEKHH2Q8IVE3 1493 aa19.34■□□□□ 0.69
PRKD1-209ENST00000616995 MYBBP1AQ9BQG0 1328 aaKnown RBP19.34■□□□□ 0.69
PRKD1-209ENST00000616995 NEUROD2Q15784 382 aa19.33■□□□□ 0.69
PRKD1-209ENST00000616995 RALBP1Q15311 655 aa19.32■□□□□ 0.68
PRKD1-209ENST00000616995 NLRP13Q86W25 1043 aa19.32■□□□□ 0.68
PRKD1-209ENST00000616995 NBR1Q14596 966 aa19.31■□□□□ 0.68
PRKD1-209ENST00000616995 CCDC141Q6ZP82 1450 aa19.31■□□□□ 0.68
PRKD1-209ENST00000616995 CCDC146Q8IYE0 955 aa19.31■□□□□ 0.68
PRKD1-209ENST00000616995 SPATA31E1Q6ZUB1 1445 aa19.29■□□□□ 0.68
PRKD1-209ENST00000616995 RCAN3Q9UKA8 241 aa19.28■□□□□ 0.68
PRKD1-209ENST00000616995 EXOC6Q8TAG9 804 aa19.28■□□□□ 0.68
PRKD1-209ENST00000616995 SYCP2Q9BX26 1530 aa19.27■□□□□ 0.68
PRKD1-209ENST00000616995 DHX29Q7Z478 1369 aaKnown RBP19.26■□□□□ 0.67
PRKD1-209ENST00000616995 CFAP70Q5T0N1 1121 aa19.26■□□□□ 0.67
PRKD1-209ENST00000616995 ITSN2Q9NZM3 1697 aa19.26■□□□□ 0.67
PRKD1-209ENST00000616995 TRAK1Q9UPV9 953 aa19.25■□□□□ 0.67
PRKD1-209ENST00000616995 ABCC10Q5T3U5 1492 aa19.23■□□□□ 0.67
PRKD1-209ENST00000616995 SCAPERQ9BY12 1400 aa19.22■□□□□ 0.67
PRKD1-209ENST00000616995 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
PRKD1-209ENST00000616995 DISP3Q9P2K9 1392 aa19.21■□□□□ 0.67
PRKD1-209ENST00000616995 ERCC6L2Q5T890 1561 aa19.21■□□□□ 0.67
PRKD1-209ENST00000616995 STK26Q9P289 416 aa19.21■□□□□ 0.67
PRKD1-209ENST00000616995 SKAP1Q86WV1 359 aa19.2■□□□□ 0.66
PRKD1-209ENST00000616995 ADAMTS8Q9UP79 889 aa19.2■□□□□ 0.66
PRKD1-209ENST00000616995 TMEM132EQ6IEE7 984 aa19.2■□□□□ 0.66
PRKD1-209ENST00000616995 ANP32AP39687 249 aaKnown RBP19.19■□□□□ 0.66
PRKD1-209ENST00000616995 KANK1Q14678 1352 aa19.19■□□□□ 0.66
PRKD1-209ENST00000616995 MSH5O43196 834 aa19.19■□□□□ 0.66
PRKD1-209ENST00000616995 ADGRL2O95490 1459 aa19.19■□□□□ 0.66
PRKD1-209ENST00000616995 CANXP27824 592 aaKnown RBP19.19■□□□□ 0.66
PRKD1-209ENST00000616995 TRAPPC8Q9Y2L5 1435 aa19.19■□□□□ 0.66
PRKD1-209ENST00000616995 MBD5Q9P267 1494 aa19.18■□□□□ 0.66
PRKD1-209ENST00000616995 FAM135AQ9P2D6 1515 aa19.18■□□□□ 0.66
PRKD1-209ENST00000616995 ABCA8O94911 1581 aa19.18■□□□□ 0.66
PRKD1-209ENST00000616995 ARID4BQ4LE39 1312 aaPredicted RBP19.17■□□□□ 0.66
PRKD1-209ENST00000616995 BCL11AQ9H165 835 aa19.16■□□□□ 0.66
PRKD1-209ENST00000616995 STAG3Q9UJ98 1225 aa19.16■□□□□ 0.66
PRKD1-209ENST00000616995 RRP1P56182 461 aaKnown RBP19.15■□□□□ 0.66
PRKD1-209ENST00000616995 ERICH6BQ5W0A0 696 aa19.14■□□□□ 0.65
PRKD1-209ENST00000616995 CDCA8Q53HL2 280 aa19.14■□□□□ 0.65
PRKD1-209ENST00000616995 CDC42BPAQ5VT25 1732 aa19.14■□□□□ 0.65
PRKD1-209ENST00000616995 MLECQ14165 292 aa19.13■□□□□ 0.65
PRKD1-209ENST00000616995 TESK2Q96S53 571 aa19.13■□□□□ 0.65
PRKD1-209ENST00000616995 RALGAPBQ86X10 1494 aa19.13■□□□□ 0.65
PRKD1-209ENST00000616995 RRP7AQ9Y3A4 280 aaKnown RBP19.13■□□□□ 0.65
PRKD1-209ENST00000616995 WASHC2CQ9Y4E1 1318 aa19.13■□□□□ 0.65
PRKD1-209ENST00000616995 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
PRKD1-209ENST00000616995 RAPGEF3O95398 923 aa19.12■□□□□ 0.65
PRKD1-209ENST00000616995 BCORL1Q5H9F3 1711 aa19.11■□□□□ 0.65
PRKD1-209ENST00000616995 PRAG1Q86YV5 1406 aa19.11■□□□□ 0.65
PRKD1-209ENST00000616995 ERBINQ96RT1 1412 aa19.11■□□□□ 0.65
PRKD1-209ENST00000616995 APAF1O14727 1248 aa19.1■□□□□ 0.65
PRKD1-209ENST00000616995 SAMD9LQ8IVG5 1584 aa19.1■□□□□ 0.65
PRKD1-209ENST00000616995 CRBNQ96SW2 442 aa19.09■□□□□ 0.65
PRKD1-209ENST00000616995 RGS3P49796 1198 aa19.09■□□□□ 0.65
PRKD1-209ENST00000616995 SMG6Q86US8 1419 aaKnown RBP19.08■□□□□ 0.65
PRKD1-209ENST00000616995 ADGRF5Q8IZF2 1346 aa19.08■□□□□ 0.65
PRKD1-209ENST00000616995 PER1O15534 1290 aaPredicted RBP19.08■□□□□ 0.65
PRKD1-209ENST00000616995 ADGBQ8N7X0 1667 aa19.08■□□□□ 0.65
PRKD1-209ENST00000616995 PPP2R1AP30153 589 aa19.08■□□□□ 0.64
PRKD1-209ENST00000616995 CYB5RLQ6IPT4 315 aa19.08■□□□□ 0.64
PRKD1-209ENST00000616995 FRAT1Q92837 279 aaPredicted RBP19.08■□□□□ 0.64
PRKD1-209ENST00000616995 ZBTB47Q9UFB7 747 aaPredicted RBP19.08■□□□□ 0.64
PRKD1-209ENST00000616995 TTC37Q6PGP7 1564 aa19.07■□□□□ 0.64
PRKD1-209ENST00000616995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.07■□□□□ 0.64
PRKD1-209ENST00000616995 SHANK2Q9UPX8 1470 aa19.06■□□□□ 0.64
PRKD1-209ENST00000616995 A2MP01023 1474 aa19.06■□□□□ 0.64
PRKD1-209ENST00000616995 PPM1GO15355 546 aaPredicted RBP19.06■□□□□ 0.64
PRKD1-209ENST00000616995 MORC1Q86VD1 984 aa19.06■□□□□ 0.64
PRKD1-209ENST00000616995 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
PRKD1-209ENST00000616995 PLCH2O75038 1416 aa19.05■□□□□ 0.64
PRKD1-209ENST00000616995 DAXXQ9UER7 740 aaPredicted RBP19.05■□□□□ 0.64
PRKD1-209ENST00000616995 PLA2R1Q13018 1463 aa19.04■□□□□ 0.64
PRKD1-209ENST00000616995 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
PRKD1-209ENST00000616995 ARHGEF12Q9NZN5 1544 aa19.04■□□□□ 0.64
PRKD1-209ENST00000616995 C20orf194Q5TEA3 1177 aa19.04■□□□□ 0.64
PRKD1-209ENST00000616995 UHRF1BP1Q6BDS2 1440 aa19.03■□□□□ 0.64
PRKD1-209ENST00000616995 CHD1O14646 1710 aa19.03■□□□□ 0.64
PRKD1-209ENST00000616995 LAS1LQ9Y4W2 734 aaKnown RBP19.03■□□□□ 0.64
PRKD1-209ENST00000616995 SRPK2P78362 688 aaKnown RBP19.02■□□□□ 0.63
PRKD1-209ENST00000616995 RTL5Q5HYW3 569 aaPredicted RBP19.02■□□□□ 0.63
PRKD1-209ENST00000616995 NOP58Q9Y2X3 529 aaKnown RBP19.02■□□□□ 0.63
PRKD1-209ENST00000616995 GOLGA2Q08379 1002 aa19.01■□□□□ 0.63
PRKD1-209ENST00000616995 KDM5CP41229 1560 aa19.01■□□□□ 0.63
PRKD1-209ENST00000616995 BCL2L13Q9BXK5 485 aa19.01■□□□□ 0.63
PRKD1-209ENST00000616995 U2SURPO15042 1029 aaKnown RBP19■□□□□ 0.63
PRKD1-209ENST00000616995 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
PRKD1-209ENST00000616995 ABCC2Q92887 1545 aa18.99■□□□□ 0.63
PRKD1-209ENST00000616995 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
PRKD1-209ENST00000616995 FANCAO15360 1455 aa18.98■□□□□ 0.63
PRKD1-209ENST00000616995 POGKQ9P215 609 aa18.97■□□□□ 0.63
PRKD1-209ENST00000616995 CFAP65Q6ZU64 1925 aaKnown RBP18.97■□□□□ 0.63
PRKD1-209ENST00000616995 FANCIQ9NVI1 1328 aa18.96■□□□□ 0.63
PRKD1-209ENST00000616995 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.96■□□□□ 0.63
PRKD1-209ENST00000616995 CABP2Q9NPB3 220 aa18.96■□□□□ 0.63
PRKD1-209ENST00000616995 ADCY10Q96PN6 1610 aa18.96■□□□□ 0.63
PRKD1-209ENST00000616995 CDC42BPBQ9Y5S2 1711 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms