RNA–Protein interactions for RNA: ENST00000616553.1

AC009090.3-201, humanhuman

BASIC

Gene AC009090.3, Length 565 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.3-201ENST00000616553 PTPN5P54829 565 aa12.66□□□□□ -0.38
AC009090.3-201ENST00000616553 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
AC009090.3-201ENST00000616553 WNT2BQ93097 391 aa12.65□□□□□ -0.38
AC009090.3-201ENST00000616553 EPAS1Q99814 870 aa12.65□□□□□ -0.38
AC009090.3-201ENST00000616553 RABGEF1Q9UJ41 708 aa12.65□□□□□ -0.38
AC009090.3-201ENST00000616553 GOLGA8CPA6NN73 597 aa12.64□□□□□ -0.39
AC009090.3-201ENST00000616553 PROX2Q3B8N5 592 aa12.63□□□□□ -0.39
AC009090.3-201ENST00000616553 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
AC009090.3-201ENST00000616553 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
AC009090.3-201ENST00000616553 C6orf132Q5T0Z8 1188 aa12.6□□□□□ -0.39
AC009090.3-201ENST00000616553 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
AC009090.3-201ENST00000616553 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
AC009090.3-201ENST00000616553 PDIA6Q15084 440 aa12.57□□□□□ -0.4
AC009090.3-201ENST00000616553 LAPTM4BQ86VI4 370 aa12.57□□□□□ -0.4
AC009090.3-201ENST00000616553 DDX12PQ92771 950 aa12.55□□□□□ -0.4
AC009090.3-201ENST00000616553 ANKK1Q8NFD2 765 aa12.54□□□□□ -0.4
AC009090.3-201ENST00000616553 KIAA1468Q9P260 1216 aa12.54□□□□□ -0.4
AC009090.3-201ENST00000616553 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
AC009090.3-201ENST00000616553 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
AC009090.3-201ENST00000616553 EN1Q05925 392 aaPredicted RBP12.51□□□□□ -0.41
AC009090.3-201ENST00000616553 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
AC009090.3-201ENST00000616553 ARIH1Q9Y4X5 557 aaPredicted RBP12.51□□□□□ -0.41
AC009090.3-201ENST00000616553 E2F4Q16254 413 aa12.5□□□□□ -0.41
AC009090.3-201ENST00000616553 SOWAHBA6NEL2 793 aa12.49□□□□□ -0.41
AC009090.3-201ENST00000616553 NBR1Q14596 966 aa12.49□□□□□ -0.41
AC009090.3-201ENST00000616553 ZFRQ96KR1 1074 aaKnown RBP12.49□□□□□ -0.41
AC009090.3-201ENST00000616553 BCAMP50895 628 aa12.47□□□□□ -0.41
AC009090.3-201ENST00000616553 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.41
AC009090.3-201ENST00000616553 MAP3K7O43318 606 aa12.45□□□□□ -0.42
AC009090.3-201ENST00000616553 RGS20O76081 388 aa12.45□□□□□ -0.42
AC009090.3-201ENST00000616553 FAM98CQ17RN3 349 aaKnown RBP12.45□□□□□ -0.42
AC009090.3-201ENST00000616553 TSR1Q2NL82 804 aaKnown RBP12.45□□□□□ -0.42
AC009090.3-201ENST00000616553 A0A0G2JS52 829 aa12.44□□□□□ -0.42
AC009090.3-201ENST00000616553 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
AC009090.3-201ENST00000616553 NYAP1Q6ZVC0 841 aa12.44□□□□□ -0.42
AC009090.3-201ENST00000616553 WDR70Q9NW82 654 aa12.42□□□□□ -0.42
AC009090.3-201ENST00000616553 TSKSQ9UJT2 592 aa12.42□□□□□ -0.42
AC009090.3-201ENST00000616553 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
AC009090.3-201ENST00000616553 WBP1LQ9NX94 342 aa12.4□□□□□ -0.42
AC009090.3-201ENST00000616553 PACS2Q86VP3 889 aa12.39□□□□□ -0.43
AC009090.3-201ENST00000616553 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
AC009090.3-201ENST00000616553 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
AC009090.3-201ENST00000616553 CDCA7LQ96GN5 454 aa12.36□□□□□ -0.43
AC009090.3-201ENST00000616553 LRCH3Q96II8 777 aa12.36□□□□□ -0.43
AC009090.3-201ENST00000616553 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.36□□□□□ -0.43
AC009090.3-201ENST00000616553 GRXCR2A6NFK2 248 aa12.35□□□□□ -0.43
AC009090.3-201ENST00000616553 PRSS12P56730 875 aa12.35□□□□□ -0.43
AC009090.3-201ENST00000616553 TSR3Q9UJK0 312 aaKnown RBP12.35□□□□□ -0.43
AC009090.3-201ENST00000616553 OSBPP22059 807 aa12.34□□□□□ -0.43
AC009090.3-201ENST00000616553 FAM198AQ9UFP1 575 aa12.34□□□□□ -0.43
AC009090.3-201ENST00000616553 HPS5Q9UPZ3 1129 aa12.33□□□□□ -0.44
AC009090.3-201ENST00000616553 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
AC009090.3-201ENST00000616553 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
AC009090.3-201ENST00000616553 KCNC4Q03721 635 aa12.28□□□□□ -0.44
AC009090.3-201ENST00000616553 CDHR5Q9HBB8 845 aa12.28□□□□□ -0.44
AC009090.3-201ENST00000616553 SMAPO00193 183 aa12.27□□□□□ -0.45
AC009090.3-201ENST00000616553 NBPF26B4DH59 902 aa12.26□□□□□ -0.45
AC009090.3-201ENST00000616553 TATDN2Q93075 761 aa12.26□□□□□ -0.45
AC009090.3-201ENST00000616553 SAMD7Q7Z3H4 446 aa12.25□□□□□ -0.45
AC009090.3-201ENST00000616553 PPP4CP60510 307 aa12.23□□□□□ -0.45
AC009090.3-201ENST00000616553 TTC13Q8NBP0 860 aa12.23□□□□□ -0.45
AC009090.3-201ENST00000616553 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
AC009090.3-201ENST00000616553 IRX2Q9BZI1 471 aaPredicted RBP12.22□□□□□ -0.45
AC009090.3-201ENST00000616553 NPDC1Q9NQX5 325 aaPredicted RBP12.22□□□□□ -0.45
AC009090.3-201ENST00000616553 NUDT18Q6ZVK8 323 aa12.2□□□□□ -0.46
AC009090.3-201ENST00000616553 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
AC009090.3-201ENST00000616553 TJAP1Q5JTD0 557 aa12.18□□□□□ -0.46
AC009090.3-201ENST00000616553 PADI6Q6TGC4 694 aa12.16□□□□□ -0.46
AC009090.3-201ENST00000616553 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
AC009090.3-201ENST00000616553 MLLT3P42568 568 aaPredicted RBP12.13□□□□□ -0.47
AC009090.3-201ENST00000616553 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
AC009090.3-201ENST00000616553 MTRQ99707 1265 aa12.12□□□□□ -0.47
AC009090.3-201ENST00000616553 APLP1P51693 650 aa12.1□□□□□ -0.47
AC009090.3-201ENST00000616553 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
AC009090.3-201ENST00000616553 EYA1Q99502 592 aa12.1□□□□□ -0.47
AC009090.3-201ENST00000616553 IL21Q9HBE4 155 aa12.1□□□□□ -0.47
AC009090.3-201ENST00000616553 RNF40O75150 1001 aa12.08□□□□□ -0.48
AC009090.3-201ENST00000616553 SWT1Q5T5J6 900 aaKnown RBP12.08□□□□□ -0.48
AC009090.3-201ENST00000616553 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
AC009090.3-201ENST00000616553 SLF2Q8IX21 1173 aa12.07□□□□□ -0.48
AC009090.3-201ENST00000616553 PTGDRQ13258 359 aa12.06□□□□□ -0.48
AC009090.3-201ENST00000616553 ZNF516Q92618 1163 aa12.04□□□□□ -0.48
AC009090.3-201ENST00000616553 PPP1R18Q6NYC8 613 aa12.01□□□□□ -0.49
AC009090.3-201ENST00000616553 P3H3Q8IVL6 736 aa12.01□□□□□ -0.49
AC009090.3-201ENST00000616553 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
AC009090.3-201ENST00000616553 ADGRG1Q9Y653 693 aa11.99□□□□□ -0.49
AC009090.3-201ENST00000616553 DNAJB2P25686 324 aa11.97□□□□□ -0.49
AC009090.3-201ENST00000616553 LAPTM4AQ15012 233 aa11.97□□□□□ -0.49
AC009090.3-201ENST00000616553 SEMA3EO15041 775 aa11.96□□□□□ -0.49
AC009090.3-201ENST00000616553 NKX2-3Q8TAU0 364 aa11.96□□□□□ -0.49
AC009090.3-201ENST00000616553 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.49
AC009090.3-201ENST00000616553 PRR14Q9BWN1 585 aa11.96□□□□□ -0.49
AC009090.3-201ENST00000616553 PRKD2Q9BZL6 878 aa11.96□□□□□ -0.49
AC009090.3-201ENST00000616553 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.96□□□□□ -0.49
AC009090.3-201ENST00000616553 V9GY48 417 aaPredicted RBP11.96□□□□□ -0.49
AC009090.3-201ENST00000616553 NUTM2FA1L443 756 aa11.95□□□□□ -0.5
AC009090.3-201ENST00000616553 COPS2P61201 443 aa11.95□□□□□ -0.5
AC009090.3-201ENST00000616553 Q6ZNB5 142 aa11.95□□□□□ -0.5
AC009090.3-201ENST00000616553 TMEM134Q9H6X4 195 aa11.95□□□□□ -0.5
AC009090.3-201ENST00000616553 HAP1P54257 671 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms