RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 IPO8O15397 1037 aaKnown RBP15.69■□□□□ 0.1
TCF4-248ENST00000616053 CSPP1Q1MSJ5 1256 aa15.68■□□□□ 0.1
TCF4-248ENST00000616053 RDXP35241 583 aaKnown RBP15.67■□□□□ 0.1
TCF4-248ENST00000616053 IPO7O95373 1038 aaKnown RBP15.66■□□□□ 0.1
TCF4-248ENST00000616053 SLC4A10Q6U841 1118 aa15.66■□□□□ 0.1
TCF4-248ENST00000616053 HSP90AB2PQ58FF8 381 aa15.65■□□□□ 0.1
TCF4-248ENST00000616053 H3BQV1 296 aa15.64■□□□□ 0.09
TCF4-248ENST00000616053 IFFO2Q5TF58 517 aa15.64■□□□□ 0.09
TCF4-248ENST00000616053 WDHD1O75717 1129 aaPredicted RBP15.64■□□□□ 0.09
TCF4-248ENST00000616053 APPP05067 770 aa15.63■□□□□ 0.09
TCF4-248ENST00000616053 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
TCF4-248ENST00000616053 NGEFQ8N5V2 710 aa15.62■□□□□ 0.09
TCF4-248ENST00000616053 KIF16BQ96L93 1317 aa15.62■□□□□ 0.09
TCF4-248ENST00000616053 TRIM29Q14134 588 aa15.62■□□□□ 0.09
TCF4-248ENST00000616053 HMMRO75330 724 aa15.62■□□□□ 0.09
TCF4-248ENST00000616053 LRRFIP1Q32MZ4 808 aaKnown RBP15.62■□□□□ 0.09
TCF4-248ENST00000616053 NOL8Q76FK4 1167 aaKnown RBP15.61■□□□□ 0.09
TCF4-248ENST00000616053 ANKRD20A12PQ8NF67 263 aa15.61■□□□□ 0.09
TCF4-248ENST00000616053 TTC5Q8N0Z6 440 aa15.61■□□□□ 0.09
TCF4-248ENST00000616053 TMF1P82094 1093 aa15.61■□□□□ 0.09
TCF4-248ENST00000616053 EPS15P42566 896 aa15.6■□□□□ 0.09
TCF4-248ENST00000616053 RTN4Q9NQC3 1192 aaKnown RBP15.6■□□□□ 0.09
TCF4-248ENST00000616053 NAP1L1P55209 391 aaKnown RBP15.6■□□□□ 0.09
TCF4-248ENST00000616053 FAM184AQ8NB25 1140 aa15.6■□□□□ 0.09
TCF4-248ENST00000616053 NUTM2FA1L443 756 aa15.6■□□□□ 0.09
TCF4-248ENST00000616053 CPLX2Q6PUV4 134 aaKnown RBP15.59■□□□□ 0.09
TCF4-248ENST00000616053 SMC4Q9NTJ3 1288 aa15.59■□□□□ 0.09
TCF4-248ENST00000616053 ITPRIPQ8IWB1 547 aa15.58■□□□□ 0.09
TCF4-248ENST00000616053 GBP4Q96PP9 640 aa15.58■□□□□ 0.08
TCF4-248ENST00000616053 NEBLO76041 1014 aa15.58■□□□□ 0.08
TCF4-248ENST00000616053 SUPT16HQ9Y5B9 1047 aaKnown RBP15.57■□□□□ 0.08
TCF4-248ENST00000616053 HOMER1Q86YM7 354 aa15.57■□□□□ 0.08
TCF4-248ENST00000616053 B4GALNT3Q6L9W6 998 aa15.57■□□□□ 0.08
TCF4-248ENST00000616053 CHMP4CQ96CF2 233 aa15.57■□□□□ 0.08
TCF4-248ENST00000616053 ERICH2A1L162 156 aa15.56■□□□□ 0.08
TCF4-248ENST00000616053 ZRSR2Q15696 482 aaKnown RBP15.56■□□□□ 0.08
TCF4-248ENST00000616053 PLCD3Q8N3E9 789 aa15.56■□□□□ 0.08
TCF4-248ENST00000616053 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
TCF4-248ENST00000616053 PTMSP20962 102 aa15.56■□□□□ 0.08
TCF4-248ENST00000616053 U2AF1L5P0DN76 240 aaPredicted RBP15.55■□□□□ 0.08
TCF4-248ENST00000616053 U2AF1Q01081 240 aaKnown RBP eCLIP15.55■□□□□ 0.08
TCF4-248ENST00000616053 FYB1O15117 783 aa15.54■□□□□ 0.08
TCF4-248ENST00000616053 CDR1P51861 262 aa15.54■□□□□ 0.08
TCF4-248ENST00000616053 MCTP1Q6DN14 999 aa15.54■□□□□ 0.08
TCF4-248ENST00000616053 GPS2Q13227 327 aa15.53■□□□□ 0.08
TCF4-248ENST00000616053 OFD1O75665 1012 aa15.53■□□□□ 0.08
TCF4-248ENST00000616053 RSF1Q96T23 1441 aaPredicted RBP15.53■□□□□ 0.08
TCF4-248ENST00000616053 MTMR7Q9Y216 660 aa15.53■□□□□ 0.08
TCF4-248ENST00000616053 MPHOSPH10O00566 681 aaKnown RBP15.52■□□□□ 0.08
TCF4-248ENST00000616053 NFXL1Q6ZNB6 911 aa15.52■□□□□ 0.07
TCF4-248ENST00000616053 CCDC27Q2M243 656 aa15.52■□□□□ 0.07
TCF4-248ENST00000616053 CCDC173Q0VFZ6 552 aa15.51■□□□□ 0.07
TCF4-248ENST00000616053 NEXNQ0ZGT2 675 aa15.51■□□□□ 0.07
TCF4-248ENST00000616053 GOLGA6L19H0YKK7 550 aa15.51■□□□□ 0.07
TCF4-248ENST00000616053 TRDNQ13061 729 aa15.5■□□□□ 0.07
TCF4-248ENST00000616053 SEPT11Q9NVA2 429 aaKnown RBP15.5■□□□□ 0.07
TCF4-248ENST00000616053 NEFHP12036 1026 aa15.49■□□□□ 0.07
TCF4-248ENST00000616053 HSP90AB4PQ58FF6 505 aa15.49■□□□□ 0.07
TCF4-248ENST00000616053 RUFY1Q96T51 708 aa15.49■□□□□ 0.07
TCF4-248ENST00000616053 HOOK1Q9UJC3 728 aaKnown RBP15.49■□□□□ 0.07
TCF4-248ENST00000616053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.48■□□□□ 0.07
TCF4-248ENST00000616053 BECN2A8MW95 431 aa15.48■□□□□ 0.07
TCF4-248ENST00000616053 SYCP1Q15431 976 aa15.48■□□□□ 0.07
TCF4-248ENST00000616053 ANKRD62A6NC57 917 aa15.48■□□□□ 0.07
TCF4-248ENST00000616053 CPLX1O14810 134 aa15.48■□□□□ 0.07
TCF4-248ENST00000616053 PHF14O94880 888 aa15.47■□□□□ 0.07
TCF4-248ENST00000616053 TRIM21P19474 475 aaKnown RBP15.47■□□□□ 0.07
TCF4-248ENST00000616053 CHMP4BP1P59074 171 aa15.47■□□□□ 0.07
TCF4-248ENST00000616053 HMGN5P82970 282 aaKnown RBP15.47■□□□□ 0.07
TCF4-248ENST00000616053 DCAF11Q8TEB1 546 aa15.47■□□□□ 0.07
TCF4-248ENST00000616053 TEFQ10587 303 aa15.46■□□□□ 0.07
TCF4-248ENST00000616053 GZF1Q9H116 711 aaPredicted RBP15.46■□□□□ 0.06
TCF4-248ENST00000616053 GRIPAP1Q4V328 841 aa15.45■□□□□ 0.06
TCF4-248ENST00000616053 ZNF710Q8N1W2 664 aa15.45■□□□□ 0.06
TCF4-248ENST00000616053 CBX1P83916 185 aa15.44■□□□□ 0.06
TCF4-248ENST00000616053 CA8P35219 290 aa15.44■□□□□ 0.06
TCF4-248ENST00000616053 PDCL3Q9H2J4 239 aa15.44■□□□□ 0.06
TCF4-248ENST00000616053 ATP2B2Q01814 1243 aa15.43■□□□□ 0.06
TCF4-248ENST00000616053 TERF2IPQ9NYB0 399 aa15.43■□□□□ 0.06
TCF4-248ENST00000616053 FOXD4L5Q5VV16 416 aaPredicted RBP15.43■□□□□ 0.06
TCF4-248ENST00000616053 FOXD4L4Q8WXT5 416 aaPredicted RBP15.43■□□□□ 0.06
TCF4-248ENST00000616053 ATF3P18847 181 aa15.43■□□□□ 0.06
TCF4-248ENST00000616053 DESP17661 470 aa15.42■□□□□ 0.06
TCF4-248ENST00000616053 RBM5P52756 815 aaKnown RBP eCLIP15.42■□□□□ 0.06
TCF4-248ENST00000616053 ANKRD18AQ8IVF6 992 aa15.42■□□□□ 0.06
TCF4-248ENST00000616053 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
TCF4-248ENST00000616053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.42■□□□□ 0.06
TCF4-248ENST00000616053 RILPL2Q969X0 211 aa15.42■□□□□ 0.06
TCF4-248ENST00000616053 SLKQ9H2G2 1235 aaPredicted RBP15.42■□□□□ 0.06
TCF4-248ENST00000616053 MYO6Q9UM54 1294 aa15.42■□□□□ 0.06
TCF4-248ENST00000616053 MAP7D2Q96T17 732 aa15.42■□□□□ 0.06
TCF4-248ENST00000616053 C9orf78Q9NZ63 289 aaPredicted RBP15.41■□□□□ 0.06
TCF4-248ENST00000616053 RWDD1Q9H446 243 aaPredicted RBP15.41■□□□□ 0.06
TCF4-248ENST00000616053 MATR3P43243 847 aaKnown RBP eCLIP15.41■□□□□ 0.065e-7■■■■■ 29.7
TCF4-248ENST00000616053 PSME1Q06323 249 aa15.41■□□□□ 0.06
TCF4-248ENST00000616053 DRC1Q96MC2 740 aa15.4■□□□□ 0.06
TCF4-248ENST00000616053 TTLL12Q14166 644 aaPredicted RBP15.4■□□□□ 0.06
TCF4-248ENST00000616053 BRMS1Q9HCU9 246 aa15.4■□□□□ 0.06
TCF4-248ENST00000616053 CCDC191Q8NCU4 936 aa15.4■□□□□ 0.06
TCF4-248ENST00000616053 SAFBQ15424 915 aaKnown RBP eCLIP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms