RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 EIF3AQ14152 1382 aaKnown RBP23.4■■□□□ 1.34
SPAST-203ENST00000615843 GOLGA6L1Q8N7Z2 621 aa23.38■■□□□ 1.33
SPAST-203ENST00000615843 COG6Q9Y2V7 657 aa23.38■■□□□ 1.33
SPAST-203ENST00000615843 E9PSI1 815 aa23.38■■□□□ 1.33
SPAST-203ENST00000615843 RAPGEF2Q9Y4G8 1499 aa23.38■■□□□ 1.33
SPAST-203ENST00000615843 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.38■■□□□ 1.33
SPAST-203ENST00000615843 PANK3Q9H999 370 aa23.36■■□□□ 1.33
SPAST-203ENST00000615843 IL27Q8NEV9 243 aa23.36■■□□□ 1.33
SPAST-203ENST00000615843 BCL2L13Q9BXK5 485 aa23.36■■□□□ 1.33
SPAST-203ENST00000615843 BRPF3Q9ULD4 1205 aa23.35■■□□□ 1.33
SPAST-203ENST00000615843 LMOD2Q6P5Q4 547 aa23.34■■□□□ 1.33
SPAST-203ENST00000615843 RRP7AQ9Y3A4 280 aaKnown RBP23.34■■□□□ 1.33
SPAST-203ENST00000615843 STK26Q9P289 416 aa23.34■■□□□ 1.33
SPAST-203ENST00000615843 ZNF771Q7L3S4 317 aaPredicted RBP23.33■■□□□ 1.33
SPAST-203ENST00000615843 ZKSCAN2Q63HK3 967 aa23.33■■□□□ 1.32
SPAST-203ENST00000615843 ANKRD45Q5TZF3 282 aa23.32■■□□□ 1.32
SPAST-203ENST00000615843 STK31Q9BXU1 1019 aa23.32■■□□□ 1.32
SPAST-203ENST00000615843 USP47Q96K76 1375 aa23.32■■□□□ 1.32
SPAST-203ENST00000615843 KIF16BQ96L93 1317 aa23.31■■□□□ 1.32
SPAST-203ENST00000615843 HSP90B1P14625 803 aaKnown RBP23.31■■□□□ 1.32
SPAST-203ENST00000615843 PAK3O75914 559 aaPredicted RBP23.29■■□□□ 1.32
SPAST-203ENST00000615843 FHOD3Q2V2M9 1422 aa23.29■■□□□ 1.32
SPAST-203ENST00000615843 MRE11P49959 708 aa23.29■■□□□ 1.32
SPAST-203ENST00000615843 GPATCH3Q96I76 525 aa23.28■■□□□ 1.32
SPAST-203ENST00000615843 SLC4A10Q6U841 1118 aa23.27■■□□□ 1.32
SPAST-203ENST00000615843 CCDC18Q5T9S5 1454 aa23.27■■□□□ 1.32
SPAST-203ENST00000615843 FOXD4L6Q3SYB3 417 aaPredicted RBP23.27■■□□□ 1.32
SPAST-203ENST00000615843 FOXD4L3Q6VB84 417 aaPredicted RBP23.27■■□□□ 1.32
SPAST-203ENST00000615843 ATP6V1DQ9Y5K8 247 aa23.27■■□□□ 1.32
SPAST-203ENST00000615843 CCDC7Q96M83 1385 aa23.24■■□□□ 1.31
SPAST-203ENST00000615843 APAF1O14727 1248 aa23.24■■□□□ 1.31
SPAST-203ENST00000615843 CNTLNQ9NXG0 1405 aa23.24■■□□□ 1.31
SPAST-203ENST00000615843 SPAG9O60271 1321 aaKnown RBP23.23■■□□□ 1.31
SPAST-203ENST00000615843 NOC3LQ8WTT2 800 aaKnown RBP23.23■■□□□ 1.31
SPAST-203ENST00000615843 CCDC34Q96HJ3 373 aa23.23■■□□□ 1.31
SPAST-203ENST00000615843 GOLGA6L19H0YKK7 550 aa23.22■■□□□ 1.31
SPAST-203ENST00000615843 RUSC2Q8N2Y8 1516 aa23.22■■□□□ 1.31
SPAST-203ENST00000615843 LMOD3Q0VAK6 560 aa23.22■■□□□ 1.31
SPAST-203ENST00000615843 TERF2IPQ9NYB0 399 aa23.21■■□□□ 1.31
SPAST-203ENST00000615843 PKNOX2Q96KN3 472 aa23.2■■□□□ 1.31
SPAST-203ENST00000615843 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.3
SPAST-203ENST00000615843 ZNF592Q92610 1267 aa23.19■■□□□ 1.3
SPAST-203ENST00000615843 MAP7D2Q96T17 732 aa23.19■■□□□ 1.3
SPAST-203ENST00000615843 C22orf23Q9BZE7 217 aa23.19■■□□□ 1.3
SPAST-203ENST00000615843 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
SPAST-203ENST00000615843 R3HCC1Q9Y3T6 440 aaKnown RBP23.19■■□□□ 1.3
SPAST-203ENST00000615843 KIF7Q2M1P5 1343 aa23.19■■□□□ 1.3
SPAST-203ENST00000615843 CHMP4AQ9BY43 222 aa23.19■■□□□ 1.3
SPAST-203ENST00000615843 BECN2A8MW95 431 aa23.18■■□□□ 1.3
SPAST-203ENST00000615843 KIF3AQ9Y496 699 aa23.18■■□□□ 1.3
SPAST-203ENST00000615843 RILPL2Q969X0 211 aa23.18■■□□□ 1.3
SPAST-203ENST00000615843 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
SPAST-203ENST00000615843 SF3A1Q15459 793 aaKnown RBP23.17■■□□□ 1.3
SPAST-203ENST00000615843 GGT6Q6P531 493 aa23.17■■□□□ 1.3
SPAST-203ENST00000615843 HDAC5Q9UQL6 1122 aa23.17■■□□□ 1.3
SPAST-203ENST00000615843 REC8O95072 547 aa23.17■■□□□ 1.3
SPAST-203ENST00000615843 TPM3P06753 285 aa23.17■■□□□ 1.3
SPAST-203ENST00000615843 NUCB2P80303 420 aa23.17■■□□□ 1.3
SPAST-203ENST00000615843 WIZO95785 1651 aa23.17■■□□□ 1.3
SPAST-203ENST00000615843 NASPP49321 788 aaPredicted RBP23.16■■□□□ 1.3
SPAST-203ENST00000615843 TPM2P07951 284 aa23.16■■□□□ 1.3
SPAST-203ENST00000615843 MTERF4Q7Z6M4 381 aaKnown RBP23.16■■□□□ 1.3
SPAST-203ENST00000615843 NGEFQ8N5V2 710 aa23.16■■□□□ 1.3
SPAST-203ENST00000615843 TRAK2O60296 914 aa23.15■■□□□ 1.3
SPAST-203ENST00000615843 DZIP1LQ8IYY4 767 aaKnown RBP23.15■■□□□ 1.3
SPAST-203ENST00000615843 MCTP1Q6DN14 999 aa23.14■■□□□ 1.3
SPAST-203ENST00000615843 HDGFP51858 240 aaKnown RBP23.14■■□□□ 1.29
SPAST-203ENST00000615843 ELL2O00472 640 aaPredicted RBP23.13■■□□□ 1.29
SPAST-203ENST00000615843 CCAR2Q8N163 923 aaKnown RBP23.13■■□□□ 1.29
SPAST-203ENST00000615843 H3BQV1 296 aa23.13■■□□□ 1.29
SPAST-203ENST00000615843 IFFO2Q5TF58 517 aa23.13■■□□□ 1.29
SPAST-203ENST00000615843 CCDC144AA2RUR9 1427 aa23.12■■□□□ 1.29
SPAST-203ENST00000615843 PRKCSHP14314 528 aaPredicted RBP23.12■■□□□ 1.29
SPAST-203ENST00000615843 GPS2Q13227 327 aa23.12■■□□□ 1.29
SPAST-203ENST00000615843 WASHC2AQ641Q2 1341 aa23.12■■□□□ 1.29
SPAST-203ENST00000615843 HNRNPMP52272 730 aaKnown RBP eCLIP23.12■■□□□ 1.29
SPAST-203ENST00000615843 SETQ01105 290 aaPredicted RBP23.11■■□□□ 1.29
SPAST-203ENST00000615843 A0A0U1RQG5 324 aaPredicted RBP23.1■■□□□ 1.29
SPAST-203ENST00000615843 CCDC39Q9UFE4 941 aa23.09■■□□□ 1.29
SPAST-203ENST00000615843 NPHP1O15259 732 aa23.09■■□□□ 1.29
SPAST-203ENST00000615843 CARMIL2Q6F5E8 1435 aa23.09■■□□□ 1.29
SPAST-203ENST00000615843 TEX35Q5T0J7 233 aa23.08■■□□□ 1.29
SPAST-203ENST00000615843 BACH2Q9BYV9 841 aa23.08■■□□□ 1.29
SPAST-203ENST00000615843 CREBRFQ8IUR6 639 aa23.08■■□□□ 1.29
SPAST-203ENST00000615843 AAMPQ13685 434 aa23.08■■□□□ 1.28
SPAST-203ENST00000615843 GORABQ5T7V8 394 aa23.07■■□□□ 1.28
SPAST-203ENST00000615843 FAM184AQ8NB25 1140 aa23.07■■□□□ 1.28
SPAST-203ENST00000615843 EFCAB2Q5VUJ9 269 aa23.06■■□□□ 1.28
SPAST-203ENST00000615843 DIAPH3Q9NSV4 1193 aa23.05■■□□□ 1.28
SPAST-203ENST00000615843 BRD4O60885 1362 aaPredicted RBP23.05■■□□□ 1.28
SPAST-203ENST00000615843 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
SPAST-203ENST00000615843 PANK1Q8TE04 598 aa23.05■■□□□ 1.28
SPAST-203ENST00000615843 LNPKQ9C0E8 428 aa23.04■■□□□ 1.28
SPAST-203ENST00000615843 TRAK1Q9UPV9 953 aa23.04■■□□□ 1.28
SPAST-203ENST00000615843 RSPH4AQ5TD94 716 aa23.04■■□□□ 1.28
SPAST-203ENST00000615843 CLSTN1O94985 981 aa23.03■■□□□ 1.28
SPAST-203ENST00000615843 CHMP3Q9Y3E7 222 aa23.03■■□□□ 1.28
SPAST-203ENST00000615843 MSH5O43196 834 aa23.02■■□□□ 1.28
SPAST-203ENST00000615843 UACAQ9BZF9 1416 aa23.02■■□□□ 1.28
SPAST-203ENST00000615843 INTS3Q68E01 1043 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms