RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 C11orf95C9JLR9 678 aaPredicted RBP18.39■□□□□ 0.54
SSBP2-220ENST00000615665 TNNT2P45379 298 aaPredicted RBP18.39■□□□□ 0.53
SSBP2-220ENST00000615665 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.53
SSBP2-220ENST00000615665 CCDC184Q52MB2 194 aa18.39■□□□□ 0.53
SSBP2-220ENST00000615665 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
SSBP2-220ENST00000615665 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
SSBP2-220ENST00000615665 TARBP1Q13395 1621 aaKnown RBP18.36■□□□□ 0.53
SSBP2-220ENST00000615665 PLEKHH2Q8IVE3 1493 aa18.36■□□□□ 0.53
SSBP2-220ENST00000615665 CCDC141Q6ZP82 1450 aa18.35■□□□□ 0.53
SSBP2-220ENST00000615665 MORC1Q86VD1 984 aa18.33■□□□□ 0.53
SSBP2-220ENST00000615665 MAGI3Q5TCQ9 1506 aa18.32■□□□□ 0.52
SSBP2-220ENST00000615665 DISP1Q96F81 1524 aa18.32■□□□□ 0.52
SSBP2-220ENST00000615665 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
SSBP2-220ENST00000615665 POGKQ9P215 609 aa18.32■□□□□ 0.52
SSBP2-220ENST00000615665 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
SSBP2-220ENST00000615665 NBPF1Q3BBV0 1214 aa18.31■□□□□ 0.52
SSBP2-220ENST00000615665 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
SSBP2-220ENST00000615665 ITSN2Q9NZM3 1697 aa18.3■□□□□ 0.52
SSBP2-220ENST00000615665 BRD4O60885 1362 aaPredicted RBP18.3■□□□□ 0.52
SSBP2-220ENST00000615665 NOP58Q9Y2X3 529 aaKnown RBP18.29■□□□□ 0.52
SSBP2-220ENST00000615665 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
SSBP2-220ENST00000615665 ATP10BO94823 1461 aa18.28■□□□□ 0.52
SSBP2-220ENST00000615665 STAC3Q96MF2 364 aa18.27■□□□□ 0.52
SSBP2-220ENST00000615665 SAFB2Q14151 953 aaKnown RBP eCLIP18.27■□□□□ 0.52
SSBP2-220ENST00000615665 ARXQ96QS3 562 aa18.27■□□□□ 0.52
SSBP2-220ENST00000615665 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
SSBP2-220ENST00000615665 SRPK2P78362 688 aaKnown RBP18.25■□□□□ 0.51
SSBP2-220ENST00000615665 DNMT1P26358 1616 aaKnown RBP18.25■□□□□ 0.51
SSBP2-220ENST00000615665 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
SSBP2-220ENST00000615665 GOLGA2Q08379 1002 aa18.24■□□□□ 0.51
SSBP2-220ENST00000615665 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
SSBP2-220ENST00000615665 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
SSBP2-220ENST00000615665 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
SSBP2-220ENST00000615665 PNISRQ8TF01 805 aaKnown RBP18.23■□□□□ 0.51
SSBP2-220ENST00000615665 STK26Q9P289 416 aa18.23■□□□□ 0.51
SSBP2-220ENST00000615665 TRAK1Q9UPV9 953 aa18.23■□□□□ 0.51
SSBP2-220ENST00000615665 RTN4Q9NQC3 1192 aaKnown RBP18.23■□□□□ 0.51
SSBP2-220ENST00000615665 RGS3P49796 1198 aa18.22■□□□□ 0.51
SSBP2-220ENST00000615665 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
SSBP2-220ENST00000615665 CCDC146Q8IYE0 955 aa18.22■□□□□ 0.51
SSBP2-220ENST00000615665 PPM1GO15355 546 aaPredicted RBP18.21■□□□□ 0.51
SSBP2-220ENST00000615665 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
SSBP2-220ENST00000615665 OSCARQ8IYS5 282 aa18.19■□□□□ 0.5
SSBP2-220ENST00000615665 GCC2Q8IWJ2 1684 aa18.19■□□□□ 0.5
SSBP2-220ENST00000615665 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
SSBP2-220ENST00000615665 NUP160Q12769 1436 aa18.19■□□□□ 0.5
SSBP2-220ENST00000615665 EXOC6Q8TAG9 804 aa18.19■□□□□ 0.5
SSBP2-220ENST00000615665 FTSJ3Q8IY81 847 aaKnown RBP18.18■□□□□ 0.5
SSBP2-220ENST00000615665 PZPP20742 1482 aa18.15■□□□□ 0.5
SSBP2-220ENST00000615665 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
SSBP2-220ENST00000615665 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
SSBP2-220ENST00000615665 PLIN1O60240 522 aa18.15■□□□□ 0.5
SSBP2-220ENST00000615665 MLECQ14165 292 aa18.15■□□□□ 0.5
SSBP2-220ENST00000615665 SCAPERQ9BY12 1400 aa18.14■□□□□ 0.49
SSBP2-220ENST00000615665 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
SSBP2-220ENST00000615665 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
SSBP2-220ENST00000615665 FANCIQ9NVI1 1328 aa18.14■□□□□ 0.49
SSBP2-220ENST00000615665 CFAP70Q5T0N1 1121 aa18.12■□□□□ 0.49
SSBP2-220ENST00000615665 SHANK2Q9UPX8 1470 aa18.12■□□□□ 0.49
SSBP2-220ENST00000615665 CEP170Q5SW79 1584 aa18.12■□□□□ 0.49
SSBP2-220ENST00000615665 VGFO15240 615 aaPredicted RBP18.12■□□□□ 0.49
SSBP2-220ENST00000615665 RALGAPBQ86X10 1494 aa18.11■□□□□ 0.49
SSBP2-220ENST00000615665 ADGRL2O95490 1459 aa18.11■□□□□ 0.49
SSBP2-220ENST00000615665 CENPJQ9HC77 1338 aaPredicted RBP18.11■□□□□ 0.49
SSBP2-220ENST00000615665 HDGFL2Q7Z4V5 671 aaPredicted RBP18.11■□□□□ 0.49
SSBP2-220ENST00000615665 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
SSBP2-220ENST00000615665 TEX14Q8IWB6 1497 aa18.1■□□□□ 0.49
SSBP2-220ENST00000615665 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
SSBP2-220ENST00000615665 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
SSBP2-220ENST00000615665 APAF1O14727 1248 aa18.09■□□□□ 0.49
SSBP2-220ENST00000615665 MS4A1P11836 297 aa18.09■□□□□ 0.49
SSBP2-220ENST00000615665 CRBNQ96SW2 442 aa18.09■□□□□ 0.49
SSBP2-220ENST00000615665 KDM6BO15054 1643 aa18.09■□□□□ 0.49
SSBP2-220ENST00000615665 CDCA7LQ96GN5 454 aa18.08■□□□□ 0.48
SSBP2-220ENST00000615665 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.48
SSBP2-220ENST00000615665 PPP2R1AP30153 589 aa18.08■□□□□ 0.48
SSBP2-220ENST00000615665 BECN1Q14457 450 aa18.08■□□□□ 0.48
SSBP2-220ENST00000615665 IPO9Q96P70 1041 aaKnown RBP18.07■□□□□ 0.48
SSBP2-220ENST00000615665 EVC2Q86UK5 1308 aa18.07■□□□□ 0.48
SSBP2-220ENST00000615665 TERF2IPQ9NYB0 399 aa18.07■□□□□ 0.48
SSBP2-220ENST00000615665 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
SSBP2-220ENST00000615665 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
SSBP2-220ENST00000615665 E9PSI1 815 aa18.05■□□□□ 0.48
SSBP2-220ENST00000615665 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
SSBP2-220ENST00000615665 HSP90AA1P07900 732 aaKnown RBP18.04■□□□□ 0.48
SSBP2-220ENST00000615665 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
SSBP2-220ENST00000615665 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
SSBP2-220ENST00000615665 ARHGEF12Q9NZN5 1544 aa18.02■□□□□ 0.47
SSBP2-220ENST00000615665 PLCH2O75038 1416 aa18.02■□□□□ 0.47
SSBP2-220ENST00000615665 NGEFQ8N5V2 710 aa18.01■□□□□ 0.47
SSBP2-220ENST00000615665 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
SSBP2-220ENST00000615665 PDE4AP27815 886 aa18.01■□□□□ 0.47
SSBP2-220ENST00000615665 CENPQQ7L2Z9 268 aaPredicted RBP18■□□□□ 0.47
SSBP2-220ENST00000615665 ADGBQ8N7X0 1667 aa18■□□□□ 0.47
SSBP2-220ENST00000615665 DUOX2Q9NRD8 1548 aa17.99■□□□□ 0.47
SSBP2-220ENST00000615665 PRAG1Q86YV5 1406 aa17.99■□□□□ 0.47
SSBP2-220ENST00000615665 CYB5RLQ6IPT4 315 aa17.99■□□□□ 0.47
SSBP2-220ENST00000615665 ADGRL1O94910 1474 aa17.98■□□□□ 0.47
SSBP2-220ENST00000615665 UHRF1BP1Q6BDS2 1440 aa17.97■□□□□ 0.47
SSBP2-220ENST00000615665 DISP3Q9P2K9 1392 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 455.1 ms