RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 MPHOSPH9Q99550 1183 aa13.38□□□□□ -0.27
TNFAIP3-208ENST00000615468 ARID3AQ99856 593 aa13.38□□□□□ -0.27
TNFAIP3-208ENST00000615468 XRCC6P12956 609 aaKnown RBP eCLIP13.38□□□□□ -0.27
TNFAIP3-208ENST00000615468 TSPY4P0CV99 314 aa13.38□□□□□ -0.27
TNFAIP3-208ENST00000615468 TSPY10P0CW01 314 aa13.38□□□□□ -0.27
TNFAIP3-208ENST00000615468 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
TNFAIP3-208ENST00000615468 SAMD9Q5K651 1589 aa13.37□□□□□ -0.27
TNFAIP3-208ENST00000615468 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP3-208ENST00000615468 MYH16Q9H6N6 1097 aa13.36□□□□□ -0.27
TNFAIP3-208ENST00000615468 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
TNFAIP3-208ENST00000615468 CENPQQ7L2Z9 268 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP3-208ENST00000615468 RBM10P98175 930 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-208ENST00000615468 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-208ENST00000615468 CFAP43Q8NDM7 1665 aa13.35□□□□□ -0.27
TNFAIP3-208ENST00000615468 C8orf34Q49A92 452 aa13.35□□□□□ -0.27
TNFAIP3-208ENST00000615468 KDM2AQ9Y2K7 1162 aa13.35□□□□□ -0.27
TNFAIP3-208ENST00000615468 EHBP1L1Q8N3D4 1523 aa13.34□□□□□ -0.27
TNFAIP3-208ENST00000615468 HECW1Q76N89 1606 aa13.34□□□□□ -0.27
TNFAIP3-208ENST00000615468 NUP153P49790 1475 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-208ENST00000615468 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
TNFAIP3-208ENST00000615468 HFM1A2PYH4 1435 aa13.33□□□□□ -0.27
TNFAIP3-208ENST00000615468 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
TNFAIP3-208ENST00000615468 NAIPQ13075 1403 aa13.32□□□□□ -0.28
TNFAIP3-208ENST00000615468 ESPNB1AK53 854 aa13.32□□□□□ -0.28
TNFAIP3-208ENST00000615468 UPF2Q9HAU5 1272 aaKnown RBP13.32□□□□□ -0.28
TNFAIP3-208ENST00000615468 SUPT6HQ7KZ85 1726 aaKnown RBP13.31□□□□□ -0.28
TNFAIP3-208ENST00000615468 KIAA0556O60303 1618 aa13.3□□□□□ -0.28
TNFAIP3-208ENST00000615468 UGGT2Q9NYU1 1516 aa13.3□□□□□ -0.28
TNFAIP3-208ENST00000615468 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
TNFAIP3-208ENST00000615468 PKD2Q13563 968 aa13.29□□□□□ -0.28
TNFAIP3-208ENST00000615468 PDCL3Q9H2J4 239 aa13.29□□□□□ -0.28
TNFAIP3-208ENST00000615468 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
TNFAIP3-208ENST00000615468 DHX29Q7Z478 1369 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-208ENST00000615468 RGL3Q3MIN7 710 aa13.28□□□□□ -0.28
TNFAIP3-208ENST00000615468 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-208ENST00000615468 FAM13BQ9NYF5 915 aa13.28□□□□□ -0.28
TNFAIP3-208ENST00000615468 TROQ12816 1431 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP3-208ENST00000615468 MRE11P49959 708 aa13.26□□□□□ -0.29
TNFAIP3-208ENST00000615468 RALBP1Q15311 655 aa13.26□□□□□ -0.29
TNFAIP3-208ENST00000615468 KIAA1211Q6ZU35 1233 aa13.26□□□□□ -0.29
TNFAIP3-208ENST00000615468 USP47Q96K76 1375 aa13.26□□□□□ -0.29
TNFAIP3-208ENST00000615468 LRRIQ1Q96JM4 1722 aa13.26□□□□□ -0.29
TNFAIP3-208ENST00000615468 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
TNFAIP3-208ENST00000615468 TPM2P07951 284 aa13.26□□□□□ -0.29
TNFAIP3-208ENST00000615468 ARHGEF11O15085 1522 aa13.25□□□□□ -0.29
TNFAIP3-208ENST00000615468 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
TNFAIP3-208ENST00000615468 CARD11Q9BXL7 1154 aa13.25□□□□□ -0.29
TNFAIP3-208ENST00000615468 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
TNFAIP3-208ENST00000615468 TRAK2O60296 914 aa13.25□□□□□ -0.29
TNFAIP3-208ENST00000615468 NLRP13Q86W25 1043 aa13.25□□□□□ -0.29
TNFAIP3-208ENST00000615468 SENP3Q9H4L4 574 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-208ENST00000615468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
TNFAIP3-208ENST00000615468 NUP160Q12769 1436 aa13.24□□□□□ -0.29
TNFAIP3-208ENST00000615468 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
TNFAIP3-208ENST00000615468 CANXP27824 592 aaKnown RBP13.24□□□□□ -0.29
TNFAIP3-208ENST00000615468 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
TNFAIP3-208ENST00000615468 RAPGEF6Q8TEU7 1601 aa13.23□□□□□ -0.29
TNFAIP3-208ENST00000615468 MCM4P33991 863 aa13.23□□□□□ -0.29
TNFAIP3-208ENST00000615468 GRPEL1Q9HAV7 217 aa13.23□□□□□ -0.29
TNFAIP3-208ENST00000615468 ABCC5O15440 1437 aa13.23□□□□□ -0.29
TNFAIP3-208ENST00000615468 DAPK1P53355 1430 aa13.23□□□□□ -0.29
TNFAIP3-208ENST00000615468 ANP32BQ92688 251 aaKnown RBP13.23□□□□□ -0.29
TNFAIP3-208ENST00000615468 NUP155O75694 1391 aa13.23□□□□□ -0.29
TNFAIP3-208ENST00000615468 SEC24BO95487 1268 aa13.23□□□□□ -0.29
TNFAIP3-208ENST00000615468 ATP10BO94823 1461 aa13.22□□□□□ -0.29
TNFAIP3-208ENST00000615468 KDM2BQ8NHM5 1336 aa13.22□□□□□ -0.29
TNFAIP3-208ENST00000615468 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
TNFAIP3-208ENST00000615468 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-208ENST00000615468 AAMPQ13685 434 aa13.2□□□□□ -0.3
TNFAIP3-208ENST00000615468 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNFAIP3-208ENST00000615468 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-208ENST00000615468 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
TNFAIP3-208ENST00000615468 ERBB4Q15303 1308 aa13.19□□□□□ -0.3
TNFAIP3-208ENST00000615468 ANKRD30AQ9BXX3 1397 aa13.19□□□□□ -0.3
TNFAIP3-208ENST00000615468 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP3-208ENST00000615468 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-208ENST00000615468 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
TNFAIP3-208ENST00000615468 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
TNFAIP3-208ENST00000615468 PRDM10Q9NQV6 1147 aa13.18□□□□□ -0.3
TNFAIP3-208ENST00000615468 CAMSAP2Q08AD1 1489 aa13.17□□□□□ -0.3
TNFAIP3-208ENST00000615468 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
TNFAIP3-208ENST00000615468 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
TNFAIP3-208ENST00000615468 R3HCC1Q9Y3T6 440 aaKnown RBP13.17□□□□□ -0.3
TNFAIP3-208ENST00000615468 KIF14Q15058 1648 aa13.17□□□□□ -0.3
TNFAIP3-208ENST00000615468 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
TNFAIP3-208ENST00000615468 KDM6BO15054 1643 aa13.16□□□□□ -0.3
TNFAIP3-208ENST00000615468 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
TNFAIP3-208ENST00000615468 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNFAIP3-208ENST00000615468 SPATA31E1Q6ZUB1 1445 aa13.16□□□□□ -0.3
TNFAIP3-208ENST00000615468 PDE4CQ08493 712 aa13.15□□□□□ -0.3
TNFAIP3-208ENST00000615468 FGD1P98174 961 aa13.15□□□□□ -0.3
TNFAIP3-208ENST00000615468 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
TNFAIP3-208ENST00000615468 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
TNFAIP3-208ENST00000615468 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
TNFAIP3-208ENST00000615468 ANKRD50Q9ULJ7 1429 aa13.13□□□□□ -0.31
TNFAIP3-208ENST00000615468 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
TNFAIP3-208ENST00000615468 USP19O94966 1318 aa13.13□□□□□ -0.31
TNFAIP3-208ENST00000615468 ANTXR1Q9H6X2 564 aa13.12□□□□□ -0.31
TNFAIP3-208ENST00000615468 DDX11L8A8MPP1 907 aa13.12□□□□□ -0.31
TNFAIP3-208ENST00000615468 IGHDP01880 384 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms