RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
CHD1-212ENST00000614616 KIF3AQ9Y496 699 aa16.88■□□□□ 0.29
CHD1-212ENST00000614616 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
CHD1-212ENST00000614616 ABCC9O60706 1549 aa16.87■□□□□ 0.29
CHD1-212ENST00000614616 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
CHD1-212ENST00000614616 HSP90B1P14625 803 aaKnown RBP16.87■□□□□ 0.29
CHD1-212ENST00000614616 USP8P40818 1118 aa16.87■□□□□ 0.29
CHD1-212ENST00000614616 CCDC191Q8NCU4 936 aa16.86■□□□□ 0.29
CHD1-212ENST00000614616 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
CHD1-212ENST00000614616 MCTP1Q6DN14 999 aa16.85■□□□□ 0.29
CHD1-212ENST00000614616 MNS1Q8NEH6 495 aa16.85■□□□□ 0.29
CHD1-212ENST00000614616 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
CHD1-212ENST00000614616 EIF3AQ14152 1382 aaKnown RBP16.85■□□□□ 0.29
CHD1-212ENST00000614616 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
CHD1-212ENST00000614616 LETM1O95202 739 aaPredicted RBP16.85■□□□□ 0.29
CHD1-212ENST00000614616 FOXD4L5Q5VV16 416 aaPredicted RBP16.85■□□□□ 0.29
CHD1-212ENST00000614616 FOXD4L4Q8WXT5 416 aaPredicted RBP16.85■□□□□ 0.29
CHD1-212ENST00000614616 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
CHD1-212ENST00000614616 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
CHD1-212ENST00000614616 KIF27Q86VH2 1401 aa16.84■□□□□ 0.29
CHD1-212ENST00000614616 NLRP13Q86W25 1043 aa16.83■□□□□ 0.29
CHD1-212ENST00000614616 EXOC6Q8TAG9 804 aa16.83■□□□□ 0.28
CHD1-212ENST00000614616 ERCC4Q92889 916 aaPredicted RBP16.83■□□□□ 0.28
CHD1-212ENST00000614616 ESPNB1AK53 854 aa16.82■□□□□ 0.28
CHD1-212ENST00000614616 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
CHD1-212ENST00000614616 DCTN1Q14203 1278 aa16.82■□□□□ 0.28
CHD1-212ENST00000614616 SMC4Q9NTJ3 1288 aa16.82■□□□□ 0.28
CHD1-212ENST00000614616 MYBBP1AQ9BQG0 1328 aaKnown RBP16.82■□□□□ 0.28
CHD1-212ENST00000614616 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
CHD1-212ENST00000614616 CDR1P51861 262 aa16.81■□□□□ 0.28
CHD1-212ENST00000614616 HMMRO75330 724 aa16.81■□□□□ 0.28
CHD1-212ENST00000614616 GRPEL1Q9HAV7 217 aa16.81■□□□□ 0.28
CHD1-212ENST00000614616 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
CHD1-212ENST00000614616 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
CHD1-212ENST00000614616 H3BQV1 296 aa16.8■□□□□ 0.28
CHD1-212ENST00000614616 IFFO2Q5TF58 517 aa16.8■□□□□ 0.28
CHD1-212ENST00000614616 FRAT2O75474 233 aaPredicted RBP16.8■□□□□ 0.28
CHD1-212ENST00000614616 BAZ1BQ9UIG0 1483 aaKnown RBP16.79■□□□□ 0.28
CHD1-212ENST00000614616 PDCL2Q8N4E4 241 aa16.79■□□□□ 0.28
CHD1-212ENST00000614616 CALCOCO1Q9P1Z2 691 aa16.79■□□□□ 0.28
CHD1-212ENST00000614616 APBB1O00213 710 aa16.79■□□□□ 0.28
CHD1-212ENST00000614616 CCP110O43303 1012 aa16.78■□□□□ 0.28
CHD1-212ENST00000614616 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
CHD1-212ENST00000614616 SF3A1Q15459 793 aaKnown RBP16.78■□□□□ 0.28
CHD1-212ENST00000614616 MORC1Q86VD1 984 aa16.78■□□□□ 0.28
CHD1-212ENST00000614616 CHMP4CQ96CF2 233 aa16.78■□□□□ 0.28
CHD1-212ENST00000614616 DCAF11Q8TEB1 546 aa16.78■□□□□ 0.28
CHD1-212ENST00000614616 SASS6Q6UVJ0 657 aa16.77■□□□□ 0.28
CHD1-212ENST00000614616 REC8O95072 547 aa16.77■□□□□ 0.28
CHD1-212ENST00000614616 CAVIN1Q6NZI2 390 aaKnown RBP16.76■□□□□ 0.27
CHD1-212ENST00000614616 NOL8Q76FK4 1167 aaKnown RBP16.76■□□□□ 0.27
CHD1-212ENST00000614616 NAT10Q9H0A0 1025 aaKnown RBP16.75■□□□□ 0.27
CHD1-212ENST00000614616 HSP90AB3PQ58FF7 597 aa16.75■□□□□ 0.27
CHD1-212ENST00000614616 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
CHD1-212ENST00000614616 TAF7LQ5H9L4 462 aa16.75■□□□□ 0.27
CHD1-212ENST00000614616 TSPY26PQ9H489 355 aa16.74■□□□□ 0.27
CHD1-212ENST00000614616 MBD3O95983 291 aa16.74■□□□□ 0.27
CHD1-212ENST00000614616 AAMPQ13685 434 aa16.74■□□□□ 0.27
CHD1-212ENST00000614616 DHX57Q6P158 1386 aaKnown RBP16.74■□□□□ 0.27
CHD1-212ENST00000614616 IPO7O95373 1038 aaKnown RBP16.73■□□□□ 0.27
CHD1-212ENST00000614616 HOOK1Q9UJC3 728 aaKnown RBP16.73■□□□□ 0.27
CHD1-212ENST00000614616 KIAA0754O94854 1291 aa16.73■□□□□ 0.27
CHD1-212ENST00000614616 CREBRFQ8IUR6 639 aa16.73■□□□□ 0.27
CHD1-212ENST00000614616 PLIN1O60240 522 aa16.73■□□□□ 0.27
CHD1-212ENST00000614616 FOXD4L6Q3SYB3 417 aaPredicted RBP16.72■□□□□ 0.27
CHD1-212ENST00000614616 FOXD4L3Q6VB84 417 aaPredicted RBP16.72■□□□□ 0.27
CHD1-212ENST00000614616 FMN1Q68DA7 1419 aa16.72■□□□□ 0.27
CHD1-212ENST00000614616 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
CHD1-212ENST00000614616 DHX8Q14562 1220 aaKnown RBP16.71■□□□□ 0.27
CHD1-212ENST00000614616 DNAJC2Q99543 621 aaKnown RBP16.71■□□□□ 0.27
CHD1-212ENST00000614616 E9PSI1 815 aa16.71■□□□□ 0.27
CHD1-212ENST00000614616 ZSCAN30Q86W11 494 aa16.71■□□□□ 0.27
CHD1-212ENST00000614616 ERICH4A6NGS2 130 aa16.7■□□□□ 0.26
CHD1-212ENST00000614616 BBXQ8WY36 941 aaPredicted RBP16.7■□□□□ 0.26
CHD1-212ENST00000614616 PRKRIP1Q9H875 184 aaPredicted RBP16.7■□□□□ 0.26
CHD1-212ENST00000614616 CEP89Q96ST8 783 aa16.7■□□□□ 0.26
CHD1-212ENST00000614616 MSH5O43196 834 aa16.7■□□□□ 0.26
CHD1-212ENST00000614616 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
CHD1-212ENST00000614616 EIF3JO75822 258 aaKnown RBP16.69■□□□□ 0.26
CHD1-212ENST00000614616 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
CHD1-212ENST00000614616 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
CHD1-212ENST00000614616 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
CHD1-212ENST00000614616 GIMAP7Q8NHV1 300 aa16.68■□□□□ 0.26
CHD1-212ENST00000614616 ANKRD20A12PQ8NF67 263 aa16.68■□□□□ 0.26
CHD1-212ENST00000614616 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
CHD1-212ENST00000614616 CLSTN1O94985 981 aa16.68■□□□□ 0.26
CHD1-212ENST00000614616 IRX3P78415 501 aaPredicted RBP16.68■□□□□ 0.26
CHD1-212ENST00000614616 RNF20Q5VTR2 975 aa16.68■□□□□ 0.26
CHD1-212ENST00000614616 CFDP1Q9UEE9 299 aaPredicted RBP16.68■□□□□ 0.26
CHD1-212ENST00000614616 BACH2Q9BYV9 841 aa16.67■□□□□ 0.26
CHD1-212ENST00000614616 DYNC1I1O14576 645 aa16.67■□□□□ 0.26
CHD1-212ENST00000614616 CGNQ9P2M7 1197 aaKnown RBP16.66■□□□□ 0.26
CHD1-212ENST00000614616 AEBP1Q8IUX7 1158 aa16.66■□□□□ 0.26
CHD1-212ENST00000614616 CCDC112Q8NEF3 446 aa16.66■□□□□ 0.26
CHD1-212ENST00000614616 RTF1Q92541 710 aaKnown RBP16.65■□□□□ 0.26
CHD1-212ENST00000614616 DDX11Q96FC9 970 aa16.65■□□□□ 0.26
CHD1-212ENST00000614616 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
CHD1-212ENST00000614616 DYDC1Q8WWB3 177 aa16.65■□□□□ 0.26
CHD1-212ENST00000614616 CLUAP1Q96AJ1 413 aa16.65■□□□□ 0.26
CHD1-212ENST00000614616 INCENPQ9NQS7 918 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms