RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 GPS2Q13227 327 aa8.81□□□□□ -1
ALMS1-207ENST00000614410 CCDC70Q6NSX1 233 aa8.81□□□□□ -1
ALMS1-207ENST00000614410 MAP7D2Q96T17 732 aa8.81□□□□□ -1
ALMS1-207ENST00000614410 PLCD4Q9BRC7 762 aa8.81□□□□□ -1
ALMS1-207ENST00000614410 AKAP17AQ02040 695 aaKnown RBP8.8□□□□□ -1
ALMS1-207ENST00000614410 ST18O60284 1047 aa8.8□□□□□ -1
ALMS1-207ENST00000614410 FOSBP53539 338 aa8.8□□□□□ -1
ALMS1-207ENST00000614410 TPM2P07951 284 aa8.8□□□□□ -1
ALMS1-207ENST00000614410 NAP1L1P55209 391 aaKnown RBP8.8□□□□□ -1
ALMS1-207ENST00000614410 TCEAL9Q9UHQ7 104 aa8.8□□□□□ -1
ALMS1-207ENST00000614410 TPM1P09493 284 aa8.8□□□□□ -1
ALMS1-207ENST00000614410 ANKRD45Q5TZF3 282 aa8.8□□□□□ -1
ALMS1-207ENST00000614410 SCRIBQ14160 1630 aa8.8□□□□□ -1
ALMS1-207ENST00000614410 TCERG1O14776 1098 aaKnown RBP8.79□□□□□ -1
ALMS1-207ENST00000614410 ELL2O00472 640 aaPredicted RBP8.79□□□□□ -1
ALMS1-207ENST00000614410 STK31Q9BXU1 1019 aa8.79□□□□□ -1
ALMS1-207ENST00000614410 GGT6Q6P531 493 aa8.79□□□□□ -1
ALMS1-207ENST00000614410 ZFYVE27Q5T4F4 411 aa8.78□□□□□ -1
ALMS1-207ENST00000614410 TTLL5Q6EMB2 1281 aa8.78□□□□□ -1
ALMS1-207ENST00000614410 BCL2L13Q9BXK5 485 aa8.78□□□□□ -1
ALMS1-207ENST00000614410 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.78□□□□□ -1
ALMS1-207ENST00000614410 TEX35Q5T0J7 233 aa8.78□□□□□ -1
ALMS1-207ENST00000614410 HDGFL2Q7Z4V5 671 aaPredicted RBP8.77□□□□□ -1
ALMS1-207ENST00000614410 APPP05067 770 aa8.77□□□□□ -1.01
ALMS1-207ENST00000614410 MSH5O43196 834 aa8.77□□□□□ -1.01
ALMS1-207ENST00000614410 SPAG9O60271 1321 aaKnown RBP8.77□□□□□ -1.01
ALMS1-207ENST00000614410 KDM4AO75164 1064 aa8.77□□□□□ -1.01
ALMS1-207ENST00000614410 ODF2Q5BJF6 829 aa8.77□□□□□ -1.01
ALMS1-207ENST00000614410 NECTIN2Q92692 538 aa8.76□□□□□ -1.01
ALMS1-207ENST00000614410 RUFY1Q96T51 708 aa8.76□□□□□ -1.01
ALMS1-207ENST00000614410 NUTM2DQ5VT03 806 aaPredicted RBP8.76□□□□□ -1.01
ALMS1-207ENST00000614410 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
ALMS1-207ENST00000614410 RRP7AQ9Y3A4 280 aaKnown RBP8.76□□□□□ -1.01
ALMS1-207ENST00000614410 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
ALMS1-207ENST00000614410 PLIN1O60240 522 aa8.75□□□□□ -1.01
ALMS1-207ENST00000614410 RSF1Q96T23 1441 aaPredicted RBP8.75□□□□□ -1.01
ALMS1-207ENST00000614410 CLIP1P30622 1438 aa8.75□□□□□ -1.01
ALMS1-207ENST00000614410 CTDP1Q9Y5B0 961 aaPredicted RBP8.75□□□□□ -1.01
ALMS1-207ENST00000614410 IPO7O95373 1038 aaKnown RBP8.74□□□□□ -1.01
ALMS1-207ENST00000614410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.74□□□□□ -1.012e-6■■■□□ 18
ALMS1-207ENST00000614410 GSE1Q14687 1217 aa8.74□□□□□ -1.01
ALMS1-207ENST00000614410 SYNE3Q6ZMZ3 975 aa8.74□□□□□ -1.01
ALMS1-207ENST00000614410 DHX16O60231 1041 aaKnown RBP8.74□□□□□ -1.01
ALMS1-207ENST00000614410 HDGFP51858 240 aaKnown RBP8.74□□□□□ -1.01
ALMS1-207ENST00000614410 CT47A1Q5JQC4 288 aaPredicted RBP8.74□□□□□ -1.01
ALMS1-207ENST00000614410 TRIM34Q9BYJ4 488 aa8.74□□□□□ -1.01
ALMS1-207ENST00000614410 HMMRO75330 724 aa8.74□□□□□ -1.01
ALMS1-207ENST00000614410 HSPA5P11021 654 aaKnown RBP8.74□□□□□ -1.01
ALMS1-207ENST00000614410 KIF3AQ9Y496 699 aa8.74□□□□□ -1.01
ALMS1-207ENST00000614410 AMPHP49418 695 aa8.73□□□□□ -1.01
ALMS1-207ENST00000614410 DDX11L8A8MPP1 907 aa8.73□□□□□ -1.01
ALMS1-207ENST00000614410 TRIM29Q14134 588 aa8.73□□□□□ -1.01
ALMS1-207ENST00000614410 MTMR7Q9Y216 660 aa8.73□□□□□ -1.01
ALMS1-207ENST00000614410 HSP90AB2PQ58FF8 381 aa8.73□□□□□ -1.01
ALMS1-207ENST00000614410 EVA1CP58658 441 aa8.72□□□□□ -1.01
ALMS1-207ENST00000614410 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.72□□□□□ -1.01
ALMS1-207ENST00000614410 BICD2Q8TD16 824 aa8.72□□□□□ -1.01
ALMS1-207ENST00000614410 AK7Q96M32 723 aa8.72□□□□□ -1.01
ALMS1-207ENST00000614410 KTN1Q86UP2 1357 aaKnown RBP8.72□□□□□ -1.01
ALMS1-207ENST00000614410 NEFHP12036 1026 aa8.71□□□□□ -1.01
ALMS1-207ENST00000614410 PDILTQ8N807 584 aa8.71□□□□□ -1.01
ALMS1-207ENST00000614410 SASS6Q6UVJ0 657 aa8.71□□□□□ -1.01
ALMS1-207ENST00000614410 H0YHG0 523 aa8.71□□□□□ -1.02
ALMS1-207ENST00000614410 HSP90AB3PQ58FF7 597 aa8.71□□□□□ -1.02
ALMS1-207ENST00000614410 IFT57Q9NWB7 429 aa8.71□□□□□ -1.02
ALMS1-207ENST00000614410 EPS15P42566 896 aa8.71□□□□□ -1.02
ALMS1-207ENST00000614410 NGDNQ8NEJ9 315 aaKnown RBP8.71□□□□□ -1.02
ALMS1-207ENST00000614410 EIF2S2P20042 333 aaKnown RBP8.7□□□□□ -1.02
ALMS1-207ENST00000614410 FYB1O15117 783 aa8.7□□□□□ -1.02
ALMS1-207ENST00000614410 R3HCC1Q9Y3T6 440 aaKnown RBP8.7□□□□□ -1.02
ALMS1-207ENST00000614410 BAZ1BQ9UIG0 1483 aaKnown RBP8.7□□□□□ -1.02
ALMS1-207ENST00000614410 CCDC43Q96MW1 224 aaKnown RBP8.7□□□□□ -1.02
ALMS1-207ENST00000614410 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
ALMS1-207ENST00000614410 VPS37DQ86XT2 251 aa8.7□□□□□ -1.02
ALMS1-207ENST00000614410 ANKRD20A12PQ8NF67 263 aa8.7□□□□□ -1.02
ALMS1-207ENST00000614410 CWC22Q9HCG8 908 aaKnown RBP8.7□□□□□ -1.02
ALMS1-207ENST00000614410 NFXL1Q6ZNB6 911 aa8.69□□□□□ -1.02
ALMS1-207ENST00000614410 RDXP35241 583 aaKnown RBP8.69□□□□□ -1.02
ALMS1-207ENST00000614410 PAF1Q8N7H5 531 aa8.69□□□□□ -1.02
ALMS1-207ENST00000614410 MAPK8IP2Q13387 824 aaPredicted RBP8.69□□□□□ -1.02
ALMS1-207ENST00000614410 CENPJQ9HC77 1338 aaPredicted RBP8.69□□□□□ -1.02
ALMS1-207ENST00000614410 ANKRD62A6NC57 917 aa8.69□□□□□ -1.02
ALMS1-207ENST00000614410 CCDC47Q96A33 483 aaKnown RBP8.68□□□□□ -1.02
ALMS1-207ENST00000614410 ANO2Q9NQ90 1003 aa8.68□□□□□ -1.02
ALMS1-207ENST00000614410 ROCK2O75116 1388 aaKnown RBP8.68□□□□□ -1.02
ALMS1-207ENST00000614410 CCDC180Q9P1Z9 1646 aa8.68□□□□□ -1.02
ALMS1-207ENST00000614410 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
ALMS1-207ENST00000614410 CPLX2Q6PUV4 134 aaKnown RBP8.68□□□□□ -1.02
ALMS1-207ENST00000614410 MNS1Q8NEH6 495 aa8.68□□□□□ -1.02
ALMS1-207ENST00000614410 CCDC191Q8NCU4 936 aa8.68□□□□□ -1.02
ALMS1-207ENST00000614410 NOL10Q9BSC4 688 aaKnown RBP8.68□□□□□ -1.02
ALMS1-207ENST00000614410 BRPF1P55201 1214 aaPredicted RBP8.68□□□□□ -1.02
ALMS1-207ENST00000614410 KLHL34Q8N239 644 aa8.68□□□□□ -1.02
ALMS1-207ENST00000614410 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
ALMS1-207ENST00000614410 ATP6V1DQ9Y5K8 247 aa8.67□□□□□ -1.02
ALMS1-207ENST00000614410 VPS37CA5D8V6 355 aaPredicted RBP8.67□□□□□ -1.02
ALMS1-207ENST00000614410 KANK1Q14678 1352 aa8.67□□□□□ -1.02
ALMS1-207ENST00000614410 CPLX1O14810 134 aa8.67□□□□□ -1.02
ALMS1-207ENST00000614410 AMOTL1Q8IY63 956 aa8.67□□□□□ -1.02
ALMS1-207ENST00000614410 C9orf78Q9NZ63 289 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms