RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 RSPH4AQ5TD94 716 aa4.47□□□□□ -1.69
CBWD3-209ENST00000614377 SALL2Q9Y467 1007 aaPredicted RBP4.47□□□□□ -1.69
CBWD3-209ENST00000614377 KCNH8Q96L42 1107 aa4.46□□□□□ -1.7
CBWD3-209ENST00000614377 PPP1R37O75864 691 aa4.46□□□□□ -1.7
CBWD3-209ENST00000614377 AAMPQ13685 434 aa4.46□□□□□ -1.7
CBWD3-209ENST00000614377 RSPH6AQ9H0K4 717 aa4.46□□□□□ -1.7
CBWD3-209ENST00000614377 NEUROD1Q13562 356 aa4.44□□□□□ -1.7
CBWD3-209ENST00000614377 KDM4FA0A1W2PPD8 638 aa4.44□□□□□ -1.7
CBWD3-209ENST00000614377 PLPP6Q8IY26 295 aa4.44□□□□□ -1.7
CBWD3-209ENST00000614377 PTCD2Q8WV60 388 aaKnown RBP4.44□□□□□ -1.7
CBWD3-209ENST00000614377 KRTAP17-1Q9BYP8 105 aa4.44□□□□□ -1.7
CBWD3-209ENST00000614377 ECM2O94769 699 aaPredicted RBP4.43□□□□□ -1.7
CBWD3-209ENST00000614377 NBR1Q14596 966 aa4.43□□□□□ -1.7
CBWD3-209ENST00000614377 PUS7Q96PZ0 661 aaKnown RBP4.43□□□□□ -1.7
CBWD3-209ENST00000614377 VPS9D1Q9Y2B5 631 aa4.43□□□□□ -1.7
CBWD3-209ENST00000614377 GOLGA8CPA6NN73 597 aa4.42□□□□□ -1.7
CBWD3-209ENST00000614377 DHX37Q8IY37 1157 aaKnown RBP4.42□□□□□ -1.7
CBWD3-209ENST00000614377 UPF1Q92900 1129 aaKnown RBP eCLIP4.42□□□□□ -1.7
CBWD3-209ENST00000614377 THSD4Q6ZMP0 1018 aa4.41□□□□□ -1.7
CBWD3-209ENST00000614377 ZNF454Q8N9F8 522 aa4.41□□□□□ -1.7
CBWD3-209ENST00000614377 A0A0G2JS52 829 aa4.41□□□□□ -1.7
CBWD3-209ENST00000614377 DSG2Q14126 1118 aa4.41□□□□□ -1.7
CBWD3-209ENST00000614377 RGL2O15211 777 aa4.41□□□□□ -1.7
CBWD3-209ENST00000614377 TBC1D12O60347 775 aa4.41□□□□□ -1.7
CBWD3-209ENST00000614377 FOXK1P85037 733 aa4.41□□□□□ -1.7
CBWD3-209ENST00000614377 WNT2BQ93097 391 aa4.41□□□□□ -1.7
CBWD3-209ENST00000614377 Q6ZNB5 142 aa4.4□□□□□ -1.71
CBWD3-209ENST00000614377 ZBTB7CA1YPR0 619 aa4.39□□□□□ -1.71
CBWD3-209ENST00000614377 RGS20O76081 388 aa4.39□□□□□ -1.71
CBWD3-209ENST00000614377 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.39□□□□□ -1.71
CBWD3-209ENST00000614377 MRPL50Q8N5N7 158 aaKnown RBP4.39□□□□□ -1.71
CBWD3-209ENST00000614377 GPHNQ9NQX3 736 aaPredicted RBP4.38□□□□□ -1.71
CBWD3-209ENST00000614377 BCCIPQ9P287 314 aaKnown RBP eCLIP4.38□□□□□ -1.71
CBWD3-209ENST00000614377 RBM10P98175 930 aaKnown RBP4.37□□□□□ -1.71
CBWD3-209ENST00000614377 IFFO2Q5TF58 517 aa4.37□□□□□ -1.71
CBWD3-209ENST00000614377 CCDC136Q96JN2 1154 aa4.37□□□□□ -1.71
CBWD3-209ENST00000614377 PTPREP23469 700 aa4.37□□□□□ -1.71
CBWD3-209ENST00000614377 BCL2L12Q9HB09 334 aa4.37□□□□□ -1.71
CBWD3-209ENST00000614377 ZNF326Q5BKZ1 582 aaKnown RBP4.36□□□□□ -1.71
CBWD3-209ENST00000614377 ZEB1P37275 1124 aaPredicted RBP4.36□□□□□ -1.71
CBWD3-209ENST00000614377 BBXQ8WY36 941 aaPredicted RBP4.36□□□□□ -1.71
CBWD3-209ENST00000614377 BHMG1C9JSJ3 638 aaPredicted RBP4.35□□□□□ -1.71
CBWD3-209ENST00000614377 ZBED2Q9BTP6 218 aa4.35□□□□□ -1.71
CBWD3-209ENST00000614377 NBPF3Q9H094 633 aa4.35□□□□□ -1.71
CBWD3-209ENST00000614377 CLSPNQ9HAW4 1339 aa4.35□□□□□ -1.71
CBWD3-209ENST00000614377 IGSF3O75054 1194 aa4.35□□□□□ -1.71
CBWD3-209ENST00000614377 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.35□□□□□ -1.71
CBWD3-209ENST00000614377 OXER1Q8TDS5 423 aa4.35□□□□□ -1.71
CBWD3-209ENST00000614377 ARID3AQ99856 593 aa4.35□□□□□ -1.71
CBWD3-209ENST00000614377 ZMYND15Q9H091 742 aa4.34□□□□□ -1.71
CBWD3-209ENST00000614377 FOSBP53539 338 aa4.34□□□□□ -1.72
CBWD3-209ENST00000614377 PKD2Q13563 968 aa4.34□□□□□ -1.72
CBWD3-209ENST00000614377 SLC4A5Q9BY07 1137 aa4.34□□□□□ -1.72
CBWD3-209ENST00000614377 BCAMP50895 628 aa4.33□□□□□ -1.72
CBWD3-209ENST00000614377 ADAM33Q9BZ11 813 aa4.33□□□□□ -1.72
CBWD3-209ENST00000614377 ANKK1Q8NFD2 765 aa4.32□□□□□ -1.72
CBWD3-209ENST00000614377 PAXIP1Q6ZW49 1069 aaPredicted RBP4.32□□□□□ -1.72
CBWD3-209ENST00000614377 TSHZ2Q9NRE2 1034 aa4.32□□□□□ -1.72
CBWD3-209ENST00000614377 PROX2Q3B8N5 592 aa4.32□□□□□ -1.72
CBWD3-209ENST00000614377 PPP1R15BQ5SWA1 713 aa4.32□□□□□ -1.72
CBWD3-209ENST00000614377 ZDHHC16Q969W1 377 aa4.32□□□□□ -1.72
CBWD3-209ENST00000614377 A0A0U1RQG5 324 aaPredicted RBP4.31□□□□□ -1.72
CBWD3-209ENST00000614377 JPH4Q96JJ6 628 aa4.31□□□□□ -1.72
CBWD3-209ENST00000614377 DNAJC5Q9H3Z4 198 aa4.3□□□□□ -1.72
CBWD3-209ENST00000614377 EVI5O60447 810 aa4.3□□□□□ -1.72
CBWD3-209ENST00000614377 ITGBL1O95965 494 aaPredicted RBP4.3□□□□□ -1.72
CBWD3-209ENST00000614377 DEKP35659 375 aaKnown RBP4.3□□□□□ -1.72
CBWD3-209ENST00000614377 NAP1L5Q96NT1 182 aaPredicted RBP4.29□□□□□ -1.72
CBWD3-209ENST00000614377 WBP1LQ9NX94 342 aa4.29□□□□□ -1.72
CBWD3-209ENST00000614377 CFAP44Q96MT7 982 aa4.29□□□□□ -1.72
CBWD3-209ENST00000614377 KCNC4Q03721 635 aa4.28□□□□□ -1.72
CBWD3-209ENST00000614377 POLR3GLQ9BT43 218 aa4.28□□□□□ -1.72
CBWD3-209ENST00000614377 CRISPLD2Q9H0B8 497 aa4.28□□□□□ -1.72
CBWD3-209ENST00000614377 SEPT9Q9UHD8 586 aaPredicted RBP4.28□□□□□ -1.72
CBWD3-209ENST00000614377 RABGEF1Q9UJ41 708 aa4.28□□□□□ -1.72
CBWD3-209ENST00000614377 DCAF1Q9Y4B6 1507 aa4.28□□□□□ -1.72
CBWD3-209ENST00000614377 PPP1R3GB7ZBB8 358 aa4.28□□□□□ -1.72
CBWD3-209ENST00000614377 LCE2BO14633 110 aa4.28□□□□□ -1.72
CBWD3-209ENST00000614377 CHGAP10645 457 aaKnown RBP4.28□□□□□ -1.72
CBWD3-209ENST00000614377 GLIPR1L2Q4G1C9 344 aa4.28□□□□□ -1.72
CBWD3-209ENST00000614377 GFRA3O60609 400 aa4.27□□□□□ -1.73
CBWD3-209ENST00000614377 COL9A1P20849 921 aa4.27□□□□□ -1.73
CBWD3-209ENST00000614377 TRAF7Q6Q0C0 670 aa4.27□□□□□ -1.73
CBWD3-209ENST00000614377 HS6ST3Q8IZP7 471 aa4.27□□□□□ -1.73
CBWD3-209ENST00000614377 KRTAP9-8Q9BYQ0 159 aa4.27□□□□□ -1.73
CBWD3-209ENST00000614377 SOWAHBA6NEL2 793 aa4.27□□□□□ -1.73
CBWD3-209ENST00000614377 ZFRQ96KR1 1074 aaKnown RBP4.27□□□□□ -1.73
CBWD3-209ENST00000614377 CLSTN1O94985 981 aa4.26□□□□□ -1.73
CBWD3-209ENST00000614377 MAP3K9P80192 1104 aa4.26□□□□□ -1.73
CBWD3-209ENST00000614377 KIAA1468Q9P260 1216 aa4.26□□□□□ -1.73
CBWD3-209ENST00000614377 NCKAP5LQ9HCH0 1330 aa4.26□□□□□ -1.73
CBWD3-209ENST00000614377 TEX2Q8IWB9 1127 aa4.26□□□□□ -1.73
CBWD3-209ENST00000614377 PCDHGA10Q9Y5H3 936 aa4.26□□□□□ -1.73
CBWD3-209ENST00000614377 CCDC180Q9P1Z9 1646 aa4.25□□□□□ -1.73
CBWD3-209ENST00000614377 TICAM2Q86XR7 235 aa4.25□□□□□ -1.73
CBWD3-209ENST00000614377 SPRYD3Q8NCJ5 442 aa4.25□□□□□ -1.73
CBWD3-209ENST00000614377 IPO4Q8TEX9 1081 aaKnown RBP4.25□□□□□ -1.73
CBWD3-209ENST00000614377 NAP1L2Q9ULW6 460 aaPredicted RBP4.25□□□□□ -1.73
CBWD3-209ENST00000614377 LAPTM4AQ15012 233 aa4.25□□□□□ -1.73
CBWD3-209ENST00000614377 NKX1-1Q15270 411 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms