RNA–Protein interactions for RNA: ENST00000614078.4

PCSK4-213, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 730 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-213ENST00000614078 NCOA1Q15788 1441 aa28.06■■■□□ 2.08
PCSK4-213ENST00000614078 PPP6R1Q9UPN7 881 aa28.05■■■□□ 2.08
PCSK4-213ENST00000614078 RRBP1Q9P2E9 1410 aaKnown RBP28.04■■■□□ 2.08
PCSK4-213ENST00000614078 ANKRD30AQ9BXX3 1397 aa28.04■■■□□ 2.08
PCSK4-213ENST00000614078 CLTCQ00610 1675 aaKnown RBP28.03■■■□□ 2.08
PCSK4-213ENST00000614078 CAMSAP1Q5T5Y3 1602 aa28.03■■■□□ 2.08
PCSK4-213ENST00000614078 PLXNC1O60486 1568 aa28.03■■■□□ 2.08
PCSK4-213ENST00000614078 ZMYM3Q14202 1370 aa28.02■■■□□ 2.08
PCSK4-213ENST00000614078 NCKAP5LQ9HCH0 1330 aa28.02■■■□□ 2.08
PCSK4-213ENST00000614078 CNTLNQ9NXG0 1405 aa28.01■■■□□ 2.08
PCSK4-213ENST00000614078 CHIC2Q9UKJ5 165 aa28■■■□□ 2.07
PCSK4-213ENST00000614078 MROH2AA6NES4 1674 aa28■■■□□ 2.07
PCSK4-213ENST00000614078 CROCC2H7BZ55 1655 aa28■■■□□ 2.07
PCSK4-213ENST00000614078 RRP7BPQ9NSQ0 103 aa27.99■■■□□ 2.07
PCSK4-213ENST00000614078 KIF3BO15066 747 aa27.98■■■□□ 2.07
PCSK4-213ENST00000614078 KIF15Q9NS87 1388 aa27.98■■■□□ 2.07
PCSK4-213ENST00000614078 DUOX2Q9NRD8 1548 aa27.97■■■□□ 2.07
PCSK4-213ENST00000614078 GGT6Q6P531 493 aa27.96■■■□□ 2.07
PCSK4-213ENST00000614078 ADGRL2O95490 1459 aa27.95■■■□□ 2.06
PCSK4-213ENST00000614078 ZNF335Q9H4Z2 1342 aaPredicted RBP27.94■■■□□ 2.06
PCSK4-213ENST00000614078 NPATQ14207 1427 aa27.93■■■□□ 2.06
PCSK4-213ENST00000614078 ROCK1Q13464 1354 aa27.93■■■□□ 2.06
PCSK4-213ENST00000614078 MYO3AQ8NEV4 1616 aa27.92■■■□□ 2.06
PCSK4-213ENST00000614078 ERBINQ96RT1 1412 aa27.91■■■□□ 2.06
PCSK4-213ENST00000614078 ITGAEP38570 1179 aa27.9■■■□□ 2.06
PCSK4-213ENST00000614078 PTPRKQ15262 1439 aa27.89■■■□□ 2.06
PCSK4-213ENST00000614078 SPATA31D1Q6ZQQ2 1576 aa27.89■■■□□ 2.05
PCSK4-213ENST00000614078 EIF2AK4Q9P2K8 1649 aaKnown RBP27.86■■■□□ 2.05
PCSK4-213ENST00000614078 ZNF142P52746 1687 aaPredicted RBP27.86■■■□□ 2.05
PCSK4-213ENST00000614078 CEP170BQ9Y4F5 1589 aaPredicted RBP27.86■■■□□ 2.05
PCSK4-213ENST00000614078 FAM135AQ9P2D6 1515 aa27.83■■■□□ 2.05
PCSK4-213ENST00000614078 WASHC2CQ9Y4E1 1318 aa27.83■■■□□ 2.05
PCSK4-213ENST00000614078 SOCS7O14512 581 aa27.81■■■□□ 2.04
PCSK4-213ENST00000614078 ANKRD50Q9ULJ7 1429 aa27.8■■■□□ 2.04
PCSK4-213ENST00000614078 IQSEC2Q5JU85 1478 aa27.78■■■□□ 2.04
PCSK4-213ENST00000614078 UBAP1LF5GYI3 381 aa27.78■■■□□ 2.04
PCSK4-213ENST00000614078 FBXO31Q5XUX0 539 aaPredicted RBP27.77■■■□□ 2.04
PCSK4-213ENST00000614078 RNF17Q9BXT8 1623 aaKnown RBP27.77■■■□□ 2.04
PCSK4-213ENST00000614078 PLA2R1Q13018 1463 aa27.75■■■□□ 2.03
PCSK4-213ENST00000614078 KANK1Q14678 1352 aa27.74■■■□□ 2.03
PCSK4-213ENST00000614078 KDM5DQ9BY66 1539 aa27.73■■■□□ 2.03
PCSK4-213ENST00000614078 PKD2Q13563 968 aa27.73■■■□□ 2.03
PCSK4-213ENST00000614078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.71■■■□□ 2.03
PCSK4-213ENST00000614078 A2ML1A8K2U0 1454 aa27.7■■■□□ 2.02
PCSK4-213ENST00000614078 PRDM15P57071 1507 aaPredicted RBP27.67■■■□□ 2.02
PCSK4-213ENST00000614078 DEPDC5O75140 1603 aa27.66■■■□□ 2.02
PCSK4-213ENST00000614078 NEURL4Q96JN8 1562 aa27.65■■■□□ 2.02
PCSK4-213ENST00000614078 ZC3H13Q5T200 1668 aaKnown RBP27.65■■■□□ 2.02
PCSK4-213ENST00000614078 MROH1Q8NDA8 1641 aa27.64■■■□□ 2.02
PCSK4-213ENST00000614078 TNRQ92752 1358 aa27.63■■■□□ 2.01
PCSK4-213ENST00000614078 ABCC3O15438 1527 aa27.63■■■□□ 2.01
PCSK4-213ENST00000614078 HFM1A2PYH4 1435 aa27.63■■■□□ 2.01
PCSK4-213ENST00000614078 POLR1AO95602 1720 aaPredicted RBP27.63■■■□□ 2.01
PCSK4-213ENST00000614078 NAIPQ13075 1403 aa27.62■■■□□ 2.01
PCSK4-213ENST00000614078 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
PCSK4-213ENST00000614078 ACIN1Q9UKV3 1341 aaKnown RBP27.61■■■□□ 2.01
PCSK4-213ENST00000614078 PZPP20742 1482 aa27.6■■■□□ 2.01
PCSK4-213ENST00000614078 PIP4K2BP78356 416 aa27.6■■■□□ 2.01
PCSK4-213ENST00000614078 ARHGAP31Q2M1Z3 1444 aa27.58■■■□□ 2.01
PCSK4-213ENST00000614078 LMTK2Q8IWU2 1503 aa27.58■■■□□ 2.01
PCSK4-213ENST00000614078 VWDEQ8N2E2 1590 aa27.57■■■□□ 2
PCSK4-213ENST00000614078 HSPA1LP34931 641 aa27.57■■■□□ 2
PCSK4-213ENST00000614078 NUP155O75694 1391 aa27.54■■■□□ 2
PCSK4-213ENST00000614078 UNC13BO14795 1591 aa27.53■■■□□ 2
PCSK4-213ENST00000614078 GCC2Q8IWJ2 1684 aa27.52■■■□□ 2
PCSK4-213ENST00000614078 CFAP65Q6ZU64 1925 aaKnown RBP27.51■■■□□ 2
PCSK4-213ENST00000614078 CEP152O94986 1710 aa27.5■■□□□ 1.99
PCSK4-213ENST00000614078 SENP3Q9H4L4 574 aaPredicted RBP27.48■■□□□ 1.99
PCSK4-213ENST00000614078 ANKLE2Q86XL3 938 aa27.47■■□□□ 1.99
PCSK4-213ENST00000614078 ALKQ9UM73 1620 aa27.47■■□□□ 1.99
PCSK4-213ENST00000614078 STRCP1A6NGW2 1772 aa27.47■■□□□ 1.99
PCSK4-213ENST00000614078 UGGT1Q9NYU2 1555 aa27.47■■□□□ 1.99
PCSK4-213ENST00000614078 RPRD2Q5VT52 1461 aaKnown RBP27.46■■□□□ 1.99
PCSK4-213ENST00000614078 CPS1P31327 1500 aa27.46■■□□□ 1.99
PCSK4-213ENST00000614078 SETD5Q9C0A6 1442 aa27.45■■□□□ 1.98
PCSK4-213ENST00000614078 TRIM52Q96A61 297 aa27.45■■□□□ 1.98
PCSK4-213ENST00000614078 MED1Q15648 1581 aaPredicted RBP27.44■■□□□ 1.98
PCSK4-213ENST00000614078 ERVK-7P63135 1459 aa27.44■■□□□ 1.98
PCSK4-213ENST00000614078 NPHP4O75161 1426 aaPredicted RBP27.43■■□□□ 1.98
PCSK4-213ENST00000614078 EFCAB6Q5THR3 1501 aa27.43■■□□□ 1.98
PCSK4-213ENST00000614078 IQGAP3Q86VI3 1631 aa27.43■■□□□ 1.98
PCSK4-213ENST00000614078 THEMISQ8N1K5 641 aaPredicted RBP27.43■■□□□ 1.98
PCSK4-213ENST00000614078 NLRP1Q9C000 1473 aa27.43■■□□□ 1.98
PCSK4-213ENST00000614078 TET3O43151 1660 aa27.42■■□□□ 1.98
PCSK4-213ENST00000614078 TOM1O60784 492 aa27.41■■□□□ 1.98
PCSK4-213ENST00000614078 HRCP23327 699 aa27.4■■□□□ 1.98
PCSK4-213ENST00000614078 IQGAP1P46940 1657 aa27.4■■□□□ 1.98
PCSK4-213ENST00000614078 SLC52A1Q9NWF4 448 aa27.38■■□□□ 1.97
PCSK4-213ENST00000614078 MED14O60244 1454 aa27.38■■□□□ 1.97
PCSK4-213ENST00000614078 NOS1P29475 1434 aa27.36■■□□□ 1.97
PCSK4-213ENST00000614078 SLC4A1APQ9BWU0 796 aaKnown RBP27.34■■□□□ 1.97
PCSK4-213ENST00000614078 TRIM26Q12899 539 aaPredicted RBP27.31■■□□□ 1.96
PCSK4-213ENST00000614078 RAB3GAP2Q9H2M9 1393 aa27.31■■□□□ 1.96
PCSK4-213ENST00000614078 LRRC7Q96NW7 1537 aa27.31■■□□□ 1.96
PCSK4-213ENST00000614078 UBR1Q8IWV7 1749 aa27.3■■□□□ 1.96
PCSK4-213ENST00000614078 IDI1Q13907 227 aa27.29■■□□□ 1.96
PCSK4-213ENST00000614078 STAG3Q9UJ98 1225 aa27.28■■□□□ 1.96
PCSK4-213ENST00000614078 E9PCH4 1651 aa27.27■■□□□ 1.96
PCSK4-213ENST00000614078 LTKP29376 864 aa27.26■■□□□ 1.95
PCSK4-213ENST00000614078 MPHOSPH9Q99550 1183 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms