RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 ZNF775Q96BV0 537 aaPredicted RBP7.8□□□□□ -1.16
LINC00649-216ENST00000613667 ONECUT3O60422 494 aaPredicted RBP7.79□□□□□ -1.16
LINC00649-216ENST00000613667 PRKD2Q9BZL6 878 aa7.79□□□□□ -1.16
LINC00649-216ENST00000613667 NCKAP5LQ9HCH0 1330 aa7.78□□□□□ -1.16
LINC00649-216ENST00000613667 HS6ST3Q8IZP7 471 aa7.78□□□□□ -1.16
LINC00649-216ENST00000613667 TSR3Q9UJK0 312 aaKnown RBP7.78□□□□□ -1.16
LINC00649-216ENST00000613667 V9GY48 417 aaPredicted RBP7.78□□□□□ -1.16
LINC00649-216ENST00000613667 PCDHGA10Q9Y5H3 936 aa7.77□□□□□ -1.17
LINC00649-216ENST00000613667 NKX1-1Q15270 411 aaPredicted RBP7.76□□□□□ -1.17
LINC00649-216ENST00000613667 KIAA1468Q9P260 1216 aa7.76□□□□□ -1.17
LINC00649-216ENST00000613667 FBXW7Q969H0 707 aa7.74□□□□□ -1.17
LINC00649-216ENST00000613667 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.74□□□□□ -1.17
LINC00649-216ENST00000613667 SEPT9Q9UHD8 586 aaPredicted RBP7.74□□□□□ -1.17
LINC00649-216ENST00000613667 HPS5Q9UPZ3 1129 aa7.74□□□□□ -1.17
LINC00649-216ENST00000613667 FAM98CQ17RN3 349 aaKnown RBP7.73□□□□□ -1.17
LINC00649-216ENST00000613667 LRCH3Q96II8 777 aa7.73□□□□□ -1.17
LINC00649-216ENST00000613667 PDE4AP27815 886 aa7.71□□□□□ -1.18
LINC00649-216ENST00000613667 MAP3K9P80192 1104 aa7.71□□□□□ -1.18
LINC00649-216ENST00000613667 TYW1BQ6NUM6 668 aa7.71□□□□□ -1.18
LINC00649-216ENST00000613667 EMILIN3Q9NT22 766 aa7.71□□□□□ -1.18
LINC00649-216ENST00000613667 PDZRN3Q9UPQ7 1066 aa7.71□□□□□ -1.18
LINC00649-216ENST00000613667 PHF14O94880 888 aa7.69□□□□□ -1.18
LINC00649-216ENST00000613667 TJAP1Q5JTD0 557 aa7.69□□□□□ -1.18
LINC00649-216ENST00000613667 TRIM6-TRIM34B2RNG4 842 aa7.68□□□□□ -1.18
LINC00649-216ENST00000613667 PPP1R18Q6NYC8 613 aa7.68□□□□□ -1.18
LINC00649-216ENST00000613667 CHGAP10645 457 aaKnown RBP7.67□□□□□ -1.18
LINC00649-216ENST00000613667 PPP4CP60510 307 aa7.67□□□□□ -1.18
LINC00649-216ENST00000613667 RYDENQ9NUL5 291 aaKnown RBP7.67□□□□□ -1.18
LINC00649-216ENST00000613667 LARP6Q9BRS8 491 aaKnown RBP7.66□□□□□ -1.18
LINC00649-216ENST00000613667 IL21Q9HBE4 155 aa7.66□□□□□ -1.18
LINC00649-216ENST00000613667 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.66□□□□□ -1.18
LINC00649-216ENST00000613667 C6orf132Q5T0Z8 1188 aa7.65□□□□□ -1.18
LINC00649-216ENST00000613667 DDX27Q96GQ7 796 aaKnown RBP7.65□□□□□ -1.18
LINC00649-216ENST00000613667 DNAJC5Q9H3Z4 198 aa7.65□□□□□ -1.18
LINC00649-216ENST00000613667 MFSD10Q14728 455 aa7.63□□□□□ -1.19
LINC00649-216ENST00000613667 MTRQ99707 1265 aa7.63□□□□□ -1.19
LINC00649-216ENST00000613667 EPAS1Q99814 870 aa7.63□□□□□ -1.19
LINC00649-216ENST00000613667 GGCXP38435 758 aa7.6□□□□□ -1.19
LINC00649-216ENST00000613667 PACS2Q86VP3 889 aa7.59□□□□□ -1.19
LINC00649-216ENST00000613667 TSKSQ9UJT2 592 aa7.59□□□□□ -1.19
LINC00649-216ENST00000613667 TREML4Q6UXN2 200 aa7.58□□□□□ -1.2
LINC00649-216ENST00000613667 ZNF516Q92618 1163 aa7.58□□□□□ -1.2
LINC00649-216ENST00000613667 RBM33Q96EV2 1170 aaKnown RBP7.58□□□□□ -1.2
LINC00649-216ENST00000613667 DGAT1O75907 488 aa7.57□□□□□ -1.2
LINC00649-216ENST00000613667 PKDCCQ504Y2 493 aa7.57□□□□□ -1.2
LINC00649-216ENST00000613667 MYT1Q01538 1121 aa7.56□□□□□ -1.2
LINC00649-216ENST00000613667 TMUB1Q9BVT8 246 aa7.56□□□□□ -1.2
LINC00649-216ENST00000613667 LOC100996750A0A140TA64 210 aa7.55□□□□□ -1.2
LINC00649-216ENST00000613667 GTPBP6O43824 516 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-216ENST00000613667 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-216ENST00000613667 SAMD7Q7Z3H4 446 aa7.55□□□□□ -1.2
LINC00649-216ENST00000613667 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
LINC00649-216ENST00000613667 C3orf80F5H4A9 247 aa7.54□□□□□ -1.2
LINC00649-216ENST00000613667 SMAPO00193 183 aa7.54□□□□□ -1.2
LINC00649-216ENST00000613667 NKX2-3Q8TAU0 364 aa7.54□□□□□ -1.2
LINC00649-216ENST00000613667 CADPS2Q86UW7 1296 aa7.53□□□□□ -1.2
LINC00649-216ENST00000613667 FAM198AQ9UFP1 575 aa7.53□□□□□ -1.2
LINC00649-216ENST00000613667 POTECB2RU33 542 aa7.52□□□□□ -1.21
LINC00649-216ENST00000613667 TSR1Q2NL82 804 aaKnown RBP7.52□□□□□ -1.21
LINC00649-216ENST00000613667 TRIM67Q6ZTA4 783 aa7.52□□□□□ -1.21
LINC00649-216ENST00000613667 DDX12PQ92771 950 aa7.52□□□□□ -1.21
LINC00649-216ENST00000613667 DPYSL4O14531 572 aa7.51□□□□□ -1.21
LINC00649-216ENST00000613667 PRR20EP86478 221 aa7.51□□□□□ -1.21
LINC00649-216ENST00000613667 PRR20CP86479 221 aa7.51□□□□□ -1.21
LINC00649-216ENST00000613667 PRR20DP86480 221 aa7.51□□□□□ -1.21
LINC00649-216ENST00000613667 PRR20BP86481 221 aa7.51□□□□□ -1.21
LINC00649-216ENST00000613667 PRR20AP86496 221 aa7.51□□□□□ -1.21
LINC00649-216ENST00000613667 STK17AQ9UEE5 414 aa7.51□□□□□ -1.21
LINC00649-216ENST00000613667 APLP1P51693 650 aa7.5□□□□□ -1.21
LINC00649-216ENST00000613667 CAMK2BQ13554 666 aa7.49□□□□□ -1.21
LINC00649-216ENST00000613667 NECTIN2Q92692 538 aa7.49□□□□□ -1.21
LINC00649-216ENST00000613667 SLC19A1P41440 591 aa7.48□□□□□ -1.21
LINC00649-216ENST00000613667 EN1Q05925 392 aaPredicted RBP7.48□□□□□ -1.21
LINC00649-216ENST00000613667 HDGFP51858 240 aaKnown RBP7.47□□□□□ -1.21
LINC00649-216ENST00000613667 EMID1Q96A84 441 aaPredicted RBP7.47□□□□□ -1.21
LINC00649-216ENST00000613667 ZNF598Q86UK7 904 aaKnown RBP7.46□□□□□ -1.22
LINC00649-216ENST00000613667 CDCA7LQ96GN5 454 aa7.46□□□□□ -1.22
LINC00649-216ENST00000613667 NBPF26B4DH59 902 aa7.45□□□□□ -1.22
LINC00649-216ENST00000613667 MAP3K7O43318 606 aa7.45□□□□□ -1.22
LINC00649-216ENST00000613667 NBR1Q14596 966 aa7.45□□□□□ -1.22
LINC00649-216ENST00000613667 SPRYD7Q5W111 196 aa7.45□□□□□ -1.22
LINC00649-216ENST00000613667 FAM187AA6NFU0 413 aa7.44□□□□□ -1.22
LINC00649-216ENST00000613667 PRIM1P49642 420 aaKnown RBP7.44□□□□□ -1.22
LINC00649-216ENST00000613667 RNF40O75150 1001 aa7.43□□□□□ -1.22
LINC00649-216ENST00000613667 WFS1O76024 890 aa7.43□□□□□ -1.22
LINC00649-216ENST00000613667 PRSS12P56730 875 aa7.43□□□□□ -1.22
LINC00649-216ENST00000613667 COPS2P61201 443 aa7.43□□□□□ -1.22
LINC00649-216ENST00000613667 INSM1Q01101 510 aaPredicted RBP7.43□□□□□ -1.22
LINC00649-216ENST00000613667 CERKQ8TCT0 537 aa7.43□□□□□ -1.22
LINC00649-216ENST00000613667 TATDN2Q93075 761 aa7.43□□□□□ -1.22
LINC00649-216ENST00000613667 ZPR1O75312 459 aa7.42□□□□□ -1.22
LINC00649-216ENST00000613667 PNMA3Q9UL41 463 aa7.42□□□□□ -1.22
LINC00649-216ENST00000613667 RNF223E7ERA6 249 aa7.41□□□□□ -1.22
LINC00649-216ENST00000613667 WIPF1O43516 503 aa7.41□□□□□ -1.22
LINC00649-216ENST00000613667 AAASQ9NRG9 546 aa7.41□□□□□ -1.22
LINC00649-216ENST00000613667 GDF9O60383 454 aa7.39□□□□□ -1.23
LINC00649-216ENST00000613667 ZNF697Q5TEC3 545 aa7.39□□□□□ -1.23
LINC00649-216ENST00000613667 ANKLE1Q8NAG6 615 aa7.39□□□□□ -1.23
LINC00649-216ENST00000613667 ST8SIA5O15466 376 aa7.38□□□□□ -1.23
LINC00649-216ENST00000613667 NUDT18Q6ZVK8 323 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms