RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 NCOA2Q15596 1464 aa7.49□□□□□ -1.21
SYCP1-209ENST00000613524 MIER1Q8N108 512 aa7.49□□□□□ -1.21
SYCP1-209ENST00000613524 ARID3AQ99856 593 aa7.49□□□□□ -1.21
SYCP1-209ENST00000613524 PPRC1Q5VV67 1664 aaKnown RBP7.48□□□□□ -1.21
SYCP1-209ENST00000613524 PHLDB1Q86UU1 1377 aa7.48□□□□□ -1.21
SYCP1-209ENST00000613524 PLCH2O75038 1416 aa7.48□□□□□ -1.21
SYCP1-209ENST00000613524 MAP3K4Q9Y6R4 1608 aa7.47□□□□□ -1.21
SYCP1-209ENST00000613524 SYCP2Q9BX26 1530 aa7.47□□□□□ -1.21
SYCP1-209ENST00000613524 LRRC9Q6ZRR7 1453 aa7.47□□□□□ -1.21
SYCP1-209ENST00000613524 GPATCH8Q9UKJ3 1502 aaKnown RBP7.46□□□□□ -1.21
SYCP1-209ENST00000613524 TIAM1Q13009 1591 aa7.46□□□□□ -1.22
SYCP1-209ENST00000613524 PCGF6Q9BYE7 350 aa7.45□□□□□ -1.22
SYCP1-209ENST00000613524 ABCA9Q8IUA7 1624 aa7.45□□□□□ -1.22
SYCP1-209ENST00000613524 CFAP43Q8NDM7 1665 aa7.45□□□□□ -1.22
SYCP1-209ENST00000613524 ARHGEF12Q9NZN5 1544 aa7.45□□□□□ -1.22
SYCP1-209ENST00000613524 GTPBP6O43824 516 aaPredicted RBP7.45□□□□□ -1.22
SYCP1-209ENST00000613524 MYO5CQ9NQX4 1742 aa7.44□□□□□ -1.22
SYCP1-209ENST00000613524 GLI2P10070 1586 aa7.44□□□□□ -1.22
SYCP1-209ENST00000613524 TRIM52Q96A61 297 aa7.44□□□□□ -1.22
SYCP1-209ENST00000613524 CDC42BPBQ9Y5S2 1711 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 NUTM2DQ5VT03 806 aaPredicted RBP7.42□□□□□ -1.22
SYCP1-209ENST00000613524 FBXO31Q5XUX0 539 aaPredicted RBP7.42□□□□□ -1.22
SYCP1-209ENST00000613524 WASHC2CQ9Y4E1 1318 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 POGZQ7Z3K3 1410 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 EHBP1L1Q8N3D4 1523 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 CDC42BPAQ5VT25 1732 aa7.42□□□□□ -1.22
SYCP1-209ENST00000613524 CFAP65Q6ZU64 1925 aaKnown RBP7.41□□□□□ -1.22
SYCP1-209ENST00000613524 CAMSAP2Q08AD1 1489 aa7.41□□□□□ -1.22
SYCP1-209ENST00000613524 NEO1Q92859 1461 aa7.41□□□□□ -1.22
SYCP1-209ENST00000613524 SUPT6HQ7KZ85 1726 aaKnown RBP7.41□□□□□ -1.22
SYCP1-209ENST00000613524 KCNV2Q8TDN2 545 aa7.41□□□□□ -1.22
SYCP1-209ENST00000613524 SAMD9LQ8IVG5 1584 aa7.4□□□□□ -1.22
SYCP1-209ENST00000613524 LMOD2Q6P5Q4 547 aa7.4□□□□□ -1.23
SYCP1-209ENST00000613524 CADPS2Q86UW7 1296 aa7.4□□□□□ -1.23
SYCP1-209ENST00000613524 ZNF518AQ6AHZ1 1483 aa7.4□□□□□ -1.23
SYCP1-209ENST00000613524 MYOM3Q5VTT5 1437 aa7.4□□□□□ -1.23
SYCP1-209ENST00000613524 ZFYVE16Q7Z3T8 1539 aa7.39□□□□□ -1.23
SYCP1-209ENST00000613524 STAG3Q9UJ98 1225 aa7.39□□□□□ -1.23
SYCP1-209ENST00000613524 NEUROD2Q15784 382 aa7.39□□□□□ -1.23
SYCP1-209ENST00000613524 HS6ST3Q8IZP7 471 aa7.38□□□□□ -1.23
SYCP1-209ENST00000613524 PREX2Q70Z35 1606 aa7.38□□□□□ -1.23
SYCP1-209ENST00000613524 FGD6Q6ZV73 1430 aa7.38□□□□□ -1.23
SYCP1-209ENST00000613524 STK25O00506 426 aa7.38□□□□□ -1.23
SYCP1-209ENST00000613524 FRMPD1Q5SYB0 1578 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 ARAP3Q8WWN8 1544 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 CAPN15O75808 1086 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 SLC24A3Q9HC58 644 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 KIF15Q9NS87 1388 aa7.37□□□□□ -1.23
SYCP1-209ENST00000613524 ABCC1P33527 1531 aa7.36□□□□□ -1.23
SYCP1-209ENST00000613524 C9orf84Q5VXU9 1444 aa7.36□□□□□ -1.23
SYCP1-209ENST00000613524 ATP10AO60312 1499 aa7.36□□□□□ -1.23
SYCP1-209ENST00000613524 RBM33Q96EV2 1170 aaKnown RBP7.35□□□□□ -1.23
SYCP1-209ENST00000613524 RICTORQ6R327 1708 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 CCDC141Q6ZP82 1450 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 MADDQ8WXG6 1647 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 SIGLEC1Q9BZZ2 1709 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 PLEKHH2Q8IVE3 1493 aa7.35□□□□□ -1.23
SYCP1-209ENST00000613524 RIMS1Q86UR5 1692 aaKnown RBP7.34□□□□□ -1.23
SYCP1-209ENST00000613524 ZNF692Q9BU19 519 aaPredicted RBP7.34□□□□□ -1.23
SYCP1-209ENST00000613524 GPBP1L1Q9HC44 474 aaPredicted RBP7.34□□□□□ -1.23
SYCP1-209ENST00000613524 PTPN23Q9H3S7 1636 aa7.34□□□□□ -1.23
SYCP1-209ENST00000613524 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.34□□□□□ -1.23
SYCP1-209ENST00000613524 C1orf115Q9H7X2 142 aa7.34□□□□□ -1.23
SYCP1-209ENST00000613524 A2MP01023 1474 aa7.34□□□□□ -1.23
SYCP1-209ENST00000613524 ATP7AQ04656 1500 aa7.34□□□□□ -1.23
SYCP1-209ENST00000613524 ABCC5O15440 1437 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 HECW2Q9P2P5 1572 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 ABCA6Q8N139 1617 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 MBD5Q9P267 1494 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 CFAP74Q9C0B2 1584 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 PTPRKQ15262 1439 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 PTPRMP28827 1452 aa7.33□□□□□ -1.24
SYCP1-209ENST00000613524 DAPK1P53355 1430 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 ITSN2Q9NZM3 1697 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 RGL3Q3MIN7 710 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 NCKAP5LQ9HCH0 1330 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 ANKRD30AQ9BXX3 1397 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 ARHGEF40Q8TER5 1519 aa7.32□□□□□ -1.24
SYCP1-209ENST00000613524 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
SYCP1-209ENST00000613524 DIP2CQ9Y2E4 1556 aa7.31□□□□□ -1.24
SYCP1-209ENST00000613524 KIDINS220Q9ULH0 1771 aa7.31□□□□□ -1.24
SYCP1-209ENST00000613524 ZNF326Q5BKZ1 582 aaKnown RBP7.31□□□□□ -1.24
SYCP1-209ENST00000613524 NUP155O75694 1391 aa7.3□□□□□ -1.24
SYCP1-209ENST00000613524 DHX29Q7Z478 1369 aaKnown RBP7.3□□□□□ -1.24
SYCP1-209ENST00000613524 RSPH4AQ5TD94 716 aa7.3□□□□□ -1.24
SYCP1-209ENST00000613524 KIAA1107Q9UPP5 1409 aa7.29□□□□□ -1.24
SYCP1-209ENST00000613524 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
SYCP1-209ENST00000613524 PLEKHG5O94827 1062 aa7.29□□□□□ -1.24
SYCP1-209ENST00000613524 SEMA3EO15041 775 aa7.29□□□□□ -1.24
SYCP1-209ENST00000613524 BCL11BQ9C0K0 894 aaPredicted RBP7.29□□□□□ -1.24
SYCP1-209ENST00000613524 MLH3Q9UHC1 1453 aa7.28□□□□□ -1.24
SYCP1-209ENST00000613524 SLC26A8Q96RN1 970 aa7.28□□□□□ -1.24
SYCP1-209ENST00000613524 MIA2Q96PC5 1412 aa7.28□□□□□ -1.24
SYCP1-209ENST00000613524 ANKRD50Q9ULJ7 1429 aa7.28□□□□□ -1.24
SYCP1-209ENST00000613524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.28□□□□□ -1.24
SYCP1-209ENST00000613524 NPM2Q86SE8 214 aaKnown RBP7.27□□□□□ -1.24
SYCP1-209ENST00000613524 FER1L4A9Z1Z3 1794 aa7.27□□□□□ -1.25
SYCP1-209ENST00000613524 NEUROD1Q13562 356 aa7.27□□□□□ -1.25
SYCP1-209ENST00000613524 KANK1Q14678 1352 aa7.27□□□□□ -1.25
SYCP1-209ENST00000613524 MAGI2Q86UL8 1455 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms