RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 ZNF326Q5BKZ1 582 aaKnown RBP11.53□□□□□ -0.56
LINC00547-201ENST00000612438 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
LINC00547-201ENST00000612438 PKD2Q13563 968 aa11.53□□□□□ -0.56
LINC00547-201ENST00000612438 LRPPRCP42704 1394 aaKnown RBP11.52□□□□□ -0.56
LINC00547-201ENST00000612438 KIF14Q15058 1648 aa11.52□□□□□ -0.56
LINC00547-201ENST00000612438 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.57
LINC00547-201ENST00000612438 KIF15Q9NS87 1388 aa11.51□□□□□ -0.57
LINC00547-201ENST00000612438 DISP1Q96F81 1524 aa11.51□□□□□ -0.57
LINC00547-201ENST00000612438 CFDP1Q9UEE9 299 aaPredicted RBP11.51□□□□□ -0.57
LINC00547-201ENST00000612438 ADGRL2O95490 1459 aa11.51□□□□□ -0.57
LINC00547-201ENST00000612438 CAMSAP2Q08AD1 1489 aa11.51□□□□□ -0.57
LINC00547-201ENST00000612438 SENP3-EIF4A1A0A087X0R7 540 aa11.51□□□□□ -0.57
LINC00547-201ENST00000612438 PRDM4Q9UKN5 801 aa11.51□□□□□ -0.57
LINC00547-201ENST00000612438 BRD4O60885 1362 aaPredicted RBP11.5□□□□□ -0.57
LINC00547-201ENST00000612438 KIAA0556O60303 1618 aa11.5□□□□□ -0.57
LINC00547-201ENST00000612438 RALGAPBQ86X10 1494 aa11.5□□□□□ -0.57
LINC00547-201ENST00000612438 KIAA0586Q9BVV6 1533 aa11.5□□□□□ -0.57
LINC00547-201ENST00000612438 KTN1Q86UP2 1357 aaKnown RBP11.5□□□□□ -0.57
LINC00547-201ENST00000612438 TROQ12816 1431 aaPredicted RBP11.49□□□□□ -0.57
LINC00547-201ENST00000612438 RALBP1Q15311 655 aa11.49□□□□□ -0.57
LINC00547-201ENST00000612438 NAP1L2Q9ULW6 460 aaPredicted RBP11.49□□□□□ -0.57
LINC00547-201ENST00000612438 PRG4Q92954 1404 aaPredicted RBP11.49□□□□□ -0.57
LINC00547-201ENST00000612438 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
LINC00547-201ENST00000612438 RRP1P56182 461 aaKnown RBP11.49□□□□□ -0.57
LINC00547-201ENST00000612438 CARD11Q9BXL7 1154 aa11.49□□□□□ -0.57
LINC00547-201ENST00000612438 MYBBP1AQ9BQG0 1328 aaKnown RBP11.49□□□□□ -0.57
LINC00547-201ENST00000612438 ANKRD30AQ9BXX3 1397 aa11.48□□□□□ -0.57
LINC00547-201ENST00000612438 BBXQ8WY36 941 aaPredicted RBP11.48□□□□□ -0.57
LINC00547-201ENST00000612438 GPATCH8Q9UKJ3 1502 aaKnown RBP11.48□□□□□ -0.57
LINC00547-201ENST00000612438 ADGBQ8N7X0 1667 aa11.48□□□□□ -0.57
LINC00547-201ENST00000612438 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
LINC00547-201ENST00000612438 CENPJQ9HC77 1338 aaPredicted RBP11.48□□□□□ -0.57
LINC00547-201ENST00000612438 TCERG1O14776 1098 aaKnown RBP11.47□□□□□ -0.57
LINC00547-201ENST00000612438 RGS3P49796 1198 aa11.47□□□□□ -0.57
LINC00547-201ENST00000612438 EXOC6Q8TAG9 804 aa11.47□□□□□ -0.57
LINC00547-201ENST00000612438 ANKRD50Q9ULJ7 1429 aa11.46□□□□□ -0.57
LINC00547-201ENST00000612438 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.57
LINC00547-201ENST00000612438 RRAGDQ9NQL2 400 aaPredicted RBP11.46□□□□□ -0.57
LINC00547-201ENST00000612438 RCAN3Q9UKA8 241 aa11.46□□□□□ -0.58
LINC00547-201ENST00000612438 ZNF777Q9ULD5 760 aaPredicted RBP11.46□□□□□ -0.58
LINC00547-201ENST00000612438 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
LINC00547-201ENST00000612438 PDCL3Q9H2J4 239 aa11.45□□□□□ -0.58
LINC00547-201ENST00000612438 PAXIP1Q6ZW49 1069 aaPredicted RBP11.45□□□□□ -0.58
LINC00547-201ENST00000612438 DCAF11Q8TEB1 546 aa11.45□□□□□ -0.58
LINC00547-201ENST00000612438 ITSN2Q9NZM3 1697 aa11.45□□□□□ -0.58
LINC00547-201ENST00000612438 PDE3BQ13370 1112 aa11.44□□□□□ -0.58
LINC00547-201ENST00000612438 NPM2Q86SE8 214 aaKnown RBP11.44□□□□□ -0.58
LINC00547-201ENST00000612438 NUP155O75694 1391 aa11.44□□□□□ -0.58
LINC00547-201ENST00000612438 NFKBIBQ15653 356 aa11.44□□□□□ -0.58
LINC00547-201ENST00000612438 CROCC2H7BZ55 1655 aa11.44□□□□□ -0.58
LINC00547-201ENST00000612438 PDE4AP27815 886 aa11.43□□□□□ -0.58
LINC00547-201ENST00000612438 MS4A1P11836 297 aa11.43□□□□□ -0.58
LINC00547-201ENST00000612438 RSPH4AQ5TD94 716 aa11.43□□□□□ -0.58
LINC00547-201ENST00000612438 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
LINC00547-201ENST00000612438 NLRP13Q86W25 1043 aa11.42□□□□□ -0.58
LINC00547-201ENST00000612438 BACH2Q9BYV9 841 aa11.42□□□□□ -0.58
LINC00547-201ENST00000612438 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
LINC00547-201ENST00000612438 ADCY10Q96PN6 1610 aa11.41□□□□□ -0.58
LINC00547-201ENST00000612438 CANXP27824 592 aaKnown RBP11.41□□□□□ -0.58
LINC00547-201ENST00000612438 PARD3Q8TEW0 1356 aa11.41□□□□□ -0.58
LINC00547-201ENST00000612438 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
LINC00547-201ENST00000612438 CHMP4BQ9H444 224 aaKnown RBP11.4□□□□□ -0.58
LINC00547-201ENST00000612438 E9PCH4 1651 aa11.4□□□□□ -0.58
LINC00547-201ENST00000612438 IPO4Q8TEX9 1081 aaKnown RBP11.4□□□□□ -0.58
LINC00547-201ENST00000612438 PLB1Q6P1J6 1458 aa11.4□□□□□ -0.58
LINC00547-201ENST00000612438 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.58
LINC00547-201ENST00000612438 GRIN2AQ12879 1464 aa11.4□□□□□ -0.59
LINC00547-201ENST00000612438 SHANK2Q9UPX8 1470 aa11.39□□□□□ -0.59
LINC00547-201ENST00000612438 NCLP19338 710 aaKnown RBP11.39□□□□□ -0.59
LINC00547-201ENST00000612438 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
LINC00547-201ENST00000612438 PER1O15534 1290 aaPredicted RBP11.38□□□□□ -0.59
LINC00547-201ENST00000612438 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
LINC00547-201ENST00000612438 CLCN1P35523 988 aa11.38□□□□□ -0.59
LINC00547-201ENST00000612438 CEP170Q5SW79 1584 aa11.38□□□□□ -0.59
LINC00547-201ENST00000612438 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
LINC00547-201ENST00000612438 PTPRGP23470 1445 aa11.38□□□□□ -0.59
LINC00547-201ENST00000612438 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
LINC00547-201ENST00000612438 INSRP06213 1382 aa11.37□□□□□ -0.59
LINC00547-201ENST00000612438 TSPY4P0CV99 314 aa11.37□□□□□ -0.59
LINC00547-201ENST00000612438 TSPY10P0CW01 314 aa11.37□□□□□ -0.59
LINC00547-201ENST00000612438 EIF4G3O43432 1585 aaKnown RBP11.36□□□□□ -0.59
LINC00547-201ENST00000612438 PLEKHD1A6NEE1 506 aa11.35□□□□□ -0.59
LINC00547-201ENST00000612438 ABCC10Q5T3U5 1492 aa11.35□□□□□ -0.59
LINC00547-201ENST00000612438 CDC42BPAQ5VT25 1732 aa11.35□□□□□ -0.59
LINC00547-201ENST00000612438 L1TD1Q5T7N2 865 aaKnown RBP11.34□□□□□ -0.59
LINC00547-201ENST00000612438 STAC3Q96MF2 364 aa11.34□□□□□ -0.59
LINC00547-201ENST00000612438 PRAG1Q86YV5 1406 aa11.34□□□□□ -0.59
LINC00547-201ENST00000612438 PLIN1O60240 522 aa11.34□□□□□ -0.59
LINC00547-201ENST00000612438 TPM2P07951 284 aa11.34□□□□□ -0.59
LINC00547-201ENST00000612438 ZMYM4Q5VZL5 1548 aa11.33□□□□□ -0.6
LINC00547-201ENST00000612438 BLMP54132 1417 aaPredicted RBP11.33□□□□□ -0.6
LINC00547-201ENST00000612438 BRD2P25440 801 aaKnown RBP11.33□□□□□ -0.6
LINC00547-201ENST00000612438 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
LINC00547-201ENST00000612438 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
LINC00547-201ENST00000612438 GPRASP1Q5JY77 1395 aa11.32□□□□□ -0.6
LINC00547-201ENST00000612438 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
LINC00547-201ENST00000612438 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
LINC00547-201ENST00000612438 HNRNPMP52272 730 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00547-201ENST00000612438 TRPM1Q7Z4N2 1603 aa11.32□□□□□ -0.6
LINC00547-201ENST00000612438 CC2D1BQ5T0F9 858 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms