RNA–Protein interactions for RNA: ENST00000612394.4

PCDH15-224, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-224ENST00000612394 SYAP1Q96A49 352 aaPredicted RBP11.4□□□□□ -0.58
PCDH15-224ENST00000612394 CCDC9Q9Y3X0 531 aaKnown RBP11.4□□□□□ -0.58
PCDH15-224ENST00000612394 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
PCDH15-224ENST00000612394 FYCO1Q9BQS8 1478 aa11.4□□□□□ -0.58
PCDH15-224ENST00000612394 IGF1RP08069 1367 aa11.4□□□□□ -0.58
PCDH15-224ENST00000612394 TPRNQ4KMQ1 711 aa11.4□□□□□ -0.58
PCDH15-224ENST00000612394 GRIN2BQ13224 1484 aa11.4□□□□□ -0.58
PCDH15-224ENST00000612394 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
PCDH15-224ENST00000612394 ERICH3Q5RHP9 1530 aa11.38□□□□□ -0.59
PCDH15-224ENST00000612394 TPM4P67936 248 aa11.38□□□□□ -0.59
PCDH15-224ENST00000612394 DHX57Q6P158 1386 aaKnown RBP11.38□□□□□ -0.59
PCDH15-224ENST00000612394 C1orf141Q5JVX7 400 aa11.37□□□□□ -0.59
PCDH15-224ENST00000612394 ISY1Q9ULR0 285 aaKnown RBP11.37□□□□□ -0.59
PCDH15-224ENST00000612394 TRAK1Q9UPV9 953 aa11.37□□□□□ -0.59
PCDH15-224ENST00000612394 CASKIN1Q8WXD9 1431 aa11.37□□□□□ -0.59
PCDH15-224ENST00000612394 ZNF330Q9Y3S2 320 aaPredicted RBP11.37□□□□□ -0.59
PCDH15-224ENST00000612394 TAOK2Q9UL54 1235 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 KIF3AQ9Y496 699 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 FGD6Q6ZV73 1430 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 KIF21BO75037 1637 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 KIAA2012Q0VF49 1180 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 MIA2Q96PC5 1412 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 E9PSI1 815 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 USP47Q96K76 1375 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 EFCAB5A4FU69 1503 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 MRC2Q9UBG0 1479 aa11.36□□□□□ -0.59
PCDH15-224ENST00000612394 MSNP26038 577 aaKnown RBP11.35□□□□□ -0.59
PCDH15-224ENST00000612394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.35□□□□□ -0.59
PCDH15-224ENST00000612394 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
PCDH15-224ENST00000612394 CHMP3Q9Y3E7 222 aa11.35□□□□□ -0.59
PCDH15-224ENST00000612394 IFT140Q96RY7 1462 aa11.35□□□□□ -0.59
PCDH15-224ENST00000612394 DRC7Q8IY82 874 aa11.35□□□□□ -0.59
PCDH15-224ENST00000612394 PLEKHH2Q8IVE3 1493 aa11.35□□□□□ -0.59
PCDH15-224ENST00000612394 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
PCDH15-224ENST00000612394 APBB1O00213 710 aa11.35□□□□□ -0.59
PCDH15-224ENST00000612394 PANK3Q9H999 370 aa11.35□□□□□ -0.59
PCDH15-224ENST00000612394 G3V3G9 751 aa11.34□□□□□ -0.59
PCDH15-224ENST00000612394 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
PCDH15-224ENST00000612394 SYNJ2O15056 1496 aa11.34□□□□□ -0.59
PCDH15-224ENST00000612394 LRRFIP1Q32MZ4 808 aaKnown RBP11.34□□□□□ -0.59
PCDH15-224ENST00000612394 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
PCDH15-224ENST00000612394 ST20-MTHFSA0A0A6YYL1 179 aa11.33□□□□□ -0.6
PCDH15-224ENST00000612394 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
PCDH15-224ENST00000612394 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
PCDH15-224ENST00000612394 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
PCDH15-224ENST00000612394 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
PCDH15-224ENST00000612394 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
PCDH15-224ENST00000612394 CLSTN1O94985 981 aa11.32□□□□□ -0.6
PCDH15-224ENST00000612394 CCDC146Q8IYE0 955 aa11.32□□□□□ -0.6
PCDH15-224ENST00000612394 RRBP1Q9P2E9 1410 aaKnown RBP11.32□□□□□ -0.6
PCDH15-224ENST00000612394 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
PCDH15-224ENST00000612394 SLC4A10Q6U841 1118 aa11.31□□□□□ -0.6
PCDH15-224ENST00000612394 NAP1L5Q96NT1 182 aaPredicted RBP11.31□□□□□ -0.6
PCDH15-224ENST00000612394 CYB5RLQ6IPT4 315 aa11.31□□□□□ -0.6
PCDH15-224ENST00000612394 ARHGAP5Q13017 1502 aa11.31□□□□□ -0.6
PCDH15-224ENST00000612394 ST18O60284 1047 aa11.31□□□□□ -0.6
PCDH15-224ENST00000612394 EVA1CP58658 441 aa11.31□□□□□ -0.6
PCDH15-224ENST00000612394 CFTRP13569 1480 aa11.3□□□□□ -0.6
PCDH15-224ENST00000612394 ZKSCAN2Q63HK3 967 aa11.3□□□□□ -0.6
PCDH15-224ENST00000612394 TTC5Q8N0Z6 440 aa11.3□□□□□ -0.6
PCDH15-224ENST00000612394 CENPQQ7L2Z9 268 aaPredicted RBP11.3□□□□□ -0.6
PCDH15-224ENST00000612394 GTF2E1P29083 439 aaPredicted RBP11.3□□□□□ -0.6
PCDH15-224ENST00000612394 EHBP1L1Q8N3D4 1523 aa11.29□□□□□ -0.6
PCDH15-224ENST00000612394 NEXNQ0ZGT2 675 aa11.29□□□□□ -0.6
PCDH15-224ENST00000612394 LTV1Q96GA3 475 aaPredicted RBP11.29□□□□□ -0.6
PCDH15-224ENST00000612394 DIAPH1O60610 1272 aaKnown RBP11.29□□□□□ -0.6
PCDH15-224ENST00000612394 PHF14O94880 888 aa11.29□□□□□ -0.6
PCDH15-224ENST00000612394 TEFQ10587 303 aa11.29□□□□□ -0.6
PCDH15-224ENST00000612394 NCOA2Q15596 1464 aa11.29□□□□□ -0.6
PCDH15-224ENST00000612394 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
PCDH15-224ENST00000612394 ANKRD50Q9ULJ7 1429 aa11.28□□□□□ -0.6
PCDH15-224ENST00000612394 AAMPQ13685 434 aa11.28□□□□□ -0.6
PCDH15-224ENST00000612394 KIF16BQ96L93 1317 aa11.28□□□□□ -0.6
PCDH15-224ENST00000612394 MFAP1P55081 439 aaKnown RBP11.28□□□□□ -0.6
PCDH15-224ENST00000612394 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.6
PCDH15-224ENST00000612394 ZBED9Q6R2W3 1325 aa11.27□□□□□ -0.6
PCDH15-224ENST00000612394 DDX58O95786 925 aaKnown RBP11.27□□□□□ -0.6
PCDH15-224ENST00000612394 HECW1Q76N89 1606 aa11.27□□□□□ -0.6
PCDH15-224ENST00000612394 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
PCDH15-224ENST00000612394 SCAPERQ9BY12 1400 aa11.27□□□□□ -0.61
PCDH15-224ENST00000612394 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-224ENST00000612394 AMOTL1Q8IY63 956 aa11.26□□□□□ -0.61
PCDH15-224ENST00000612394 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-224ENST00000612394 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
PCDH15-224ENST00000612394 PSME1Q06323 249 aa11.26□□□□□ -0.61
PCDH15-224ENST00000612394 PRKRIP1Q9H875 184 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-224ENST00000612394 RBM19Q9Y4C8 960 aaKnown RBP11.26□□□□□ -0.61
PCDH15-224ENST00000612394 RUFY2Q8WXA3 655 aa11.25□□□□□ -0.61
PCDH15-224ENST00000612394 DDX19BQ9UMR2 479 aa11.25□□□□□ -0.61
PCDH15-224ENST00000612394 HFM1A2PYH4 1435 aa11.25□□□□□ -0.61
PCDH15-224ENST00000612394 WWC1Q8IX03 1113 aa11.25□□□□□ -0.61
PCDH15-224ENST00000612394 NOL10Q9BSC4 688 aaKnown RBP11.25□□□□□ -0.61
PCDH15-224ENST00000612394 ATP6V1DQ9Y5K8 247 aa11.24□□□□□ -0.61
PCDH15-224ENST00000612394 PRG4Q92954 1404 aaPredicted RBP11.24□□□□□ -0.61
PCDH15-224ENST00000612394 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
PCDH15-224ENST00000612394 ATF3P18847 181 aa11.23□□□□□ -0.61
PCDH15-224ENST00000612394 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
PCDH15-224ENST00000612394 CLUAP1Q96AJ1 413 aa11.23□□□□□ -0.61
PCDH15-224ENST00000612394 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
PCDH15-224ENST00000612394 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms