RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 DHX57Q6P158 1386 aaKnown RBP26.11■■□□□ 1.77
SMAD6-205ENST00000612349 L1TD1Q5T7N2 865 aaKnown RBP26.11■■□□□ 1.77
SMAD6-205ENST00000612349 KIF15Q9NS87 1388 aa26.1■■□□□ 1.77
SMAD6-205ENST00000612349 CENPJQ9HC77 1338 aaPredicted RBP26.1■■□□□ 1.77
SMAD6-205ENST00000612349 ST20-MTHFSA0A0A6YYL1 179 aa26.1■■□□□ 1.77
SMAD6-205ENST00000612349 GBP4Q96PP9 640 aa26.09■■□□□ 1.77
SMAD6-205ENST00000612349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.09■■□□□ 1.77
SMAD6-205ENST00000612349 CHMP3Q9Y3E7 222 aa26.08■■□□□ 1.76
SMAD6-205ENST00000612349 EVC2Q86UK5 1308 aa26.07■■□□□ 1.76
SMAD6-205ENST00000612349 CHAF1AQ13111 956 aaPredicted RBP26.07■■□□□ 1.76
SMAD6-205ENST00000612349 LTV1Q96GA3 475 aaPredicted RBP26.04■■□□□ 1.76
SMAD6-205ENST00000612349 NUTM2FA1L443 756 aa26.04■■□□□ 1.76
SMAD6-205ENST00000612349 SLC4A10Q6U841 1118 aa26.04■■□□□ 1.76
SMAD6-205ENST00000612349 MYBBP1AQ9BQG0 1328 aaKnown RBP26.04■■□□□ 1.76
SMAD6-205ENST00000612349 COG3Q96JB2 828 aa26.03■■□□□ 1.76
SMAD6-205ENST00000612349 CGNL1Q0VF96 1302 aa26.03■■□□□ 1.76
SMAD6-205ENST00000612349 NAP1L5Q96NT1 182 aaPredicted RBP26.03■■□□□ 1.76
SMAD6-205ENST00000612349 CCDC146Q8IYE0 955 aa26.02■■□□□ 1.76
SMAD6-205ENST00000612349 SPRYD3Q8NCJ5 442 aa26.02■■□□□ 1.76
SMAD6-205ENST00000612349 AQRO60306 1485 aaKnown RBP eCLIP26.01■■□□□ 1.76
SMAD6-205ENST00000612349 CCDC34Q96HJ3 373 aa26■■□□□ 1.75
SMAD6-205ENST00000612349 PANK3Q9H999 370 aa26■■□□□ 1.75
SMAD6-205ENST00000612349 TRIM6-TRIM34B2RNG4 842 aa25.99■■□□□ 1.75
SMAD6-205ENST00000612349 DRC7Q8IY82 874 aa25.99■■□□□ 1.75
SMAD6-205ENST00000612349 MYOM3Q5VTT5 1437 aa25.99■■□□□ 1.75
SMAD6-205ENST00000612349 CLUAP1Q96AJ1 413 aa25.99■■□□□ 1.75
SMAD6-205ENST00000612349 TSHZ2Q9NRE2 1034 aa25.99■■□□□ 1.75
SMAD6-205ENST00000612349 CLSTN1O94985 981 aa25.98■■□□□ 1.75
SMAD6-205ENST00000612349 GTF2E1P29083 439 aaPredicted RBP25.98■■□□□ 1.75
SMAD6-205ENST00000612349 MSNP26038 577 aaKnown RBP25.97■■□□□ 1.75
SMAD6-205ENST00000612349 STAC3Q96MF2 364 aa25.96■■□□□ 1.75
SMAD6-205ENST00000612349 SYAP1Q96A49 352 aaPredicted RBP25.96■■□□□ 1.75
SMAD6-205ENST00000612349 G3V3G9 751 aa25.94■■□□□ 1.74
SMAD6-205ENST00000612349 DCAF8Q5TAQ9 597 aa25.94■■□□□ 1.74
SMAD6-205ENST00000612349 C1orf141Q5JVX7 400 aa25.93■■□□□ 1.74
SMAD6-205ENST00000612349 AEBP2Q6ZN18 517 aaPredicted RBP25.93■■□□□ 1.74
SMAD6-205ENST00000612349 ZNF644Q9H582 1327 aaPredicted RBP25.92■■□□□ 1.74
SMAD6-205ENST00000612349 MFAP1P55081 439 aaKnown RBP25.91■■□□□ 1.74
SMAD6-205ENST00000612349 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
SMAD6-205ENST00000612349 NGEFQ8N5V2 710 aa25.9■■□□□ 1.74
SMAD6-205ENST00000612349 FGD6Q6ZV73 1430 aa25.9■■□□□ 1.74
SMAD6-205ENST00000612349 TEFQ10587 303 aa25.9■■□□□ 1.74
SMAD6-205ENST00000612349 FAM69CQ0P6D2 419 aa25.89■■□□□ 1.73
SMAD6-205ENST00000612349 KIF3AQ9Y496 699 aa25.88■■□□□ 1.73
SMAD6-205ENST00000612349 USP47Q96K76 1375 aa25.88■■□□□ 1.73
SMAD6-205ENST00000612349 E9PSI1 815 aa25.88■■□□□ 1.73
SMAD6-205ENST00000612349 CSPP1Q1MSJ5 1256 aa25.87■■□□□ 1.73
SMAD6-205ENST00000612349 FRAT2O75474 233 aaPredicted RBP25.87■■□□□ 1.73
SMAD6-205ENST00000612349 HSP90B1P14625 803 aaKnown RBP25.87■■□□□ 1.73
SMAD6-205ENST00000612349 MINK1Q8N4C8 1332 aaPredicted RBP25.87■■□□□ 1.73
SMAD6-205ENST00000612349 EVA1CP58658 441 aa25.85■■□□□ 1.73
SMAD6-205ENST00000612349 KIAA2012Q0VF49 1180 aa25.85■■□□□ 1.73
SMAD6-205ENST00000612349 SLKQ9H2G2 1235 aaPredicted RBP25.85■■□□□ 1.73
SMAD6-205ENST00000612349 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
SMAD6-205ENST00000612349 TPM4P67936 248 aa25.84■■□□□ 1.73
SMAD6-205ENST00000612349 RRP7AQ9Y3A4 280 aaKnown RBP25.84■■□□□ 1.73
SMAD6-205ENST00000612349 CHMP4CQ96CF2 233 aa25.83■■□□□ 1.73
SMAD6-205ENST00000612349 ZKSCAN2Q63HK3 967 aa25.82■■□□□ 1.72
SMAD6-205ENST00000612349 PRKRIP1Q9H875 184 aaPredicted RBP25.82■■□□□ 1.72
SMAD6-205ENST00000612349 CFTRP13569 1480 aa25.82■■□□□ 1.72
SMAD6-205ENST00000612349 ST18O60284 1047 aa25.82■■□□□ 1.72
SMAD6-205ENST00000612349 NEXNQ0ZGT2 675 aa25.81■■□□□ 1.72
SMAD6-205ENST00000612349 TTC5Q8N0Z6 440 aa25.8■■□□□ 1.72
SMAD6-205ENST00000612349 CUX1P39880 1505 aa25.8■■□□□ 1.72
SMAD6-205ENST00000612349 KIF21BO75037 1637 aa25.8■■□□□ 1.72
SMAD6-205ENST00000612349 DIAPH1O60610 1272 aaKnown RBP25.79■■□□□ 1.72
SMAD6-205ENST00000612349 TOMM22Q9NS69 142 aa25.78■■□□□ 1.72
SMAD6-205ENST00000612349 CASKIN1Q8WXD9 1431 aa25.77■■□□□ 1.72
SMAD6-205ENST00000612349 LRRC9Q6ZRR7 1453 aa25.77■■□□□ 1.72
SMAD6-205ENST00000612349 KIF16BQ96L93 1317 aa25.77■■□□□ 1.72
SMAD6-205ENST00000612349 LRRFIP1Q32MZ4 808 aaKnown RBP25.77■■□□□ 1.72
SMAD6-205ENST00000612349 ELL2O00472 640 aaPredicted RBP25.77■■□□□ 1.72
SMAD6-205ENST00000612349 CENPQQ7L2Z9 268 aaPredicted RBP25.76■■□□□ 1.71
SMAD6-205ENST00000612349 PSME1Q06323 249 aa25.75■■□□□ 1.71
SMAD6-205ENST00000612349 ANKRD50Q9ULJ7 1429 aa25.74■■□□□ 1.71
SMAD6-205ENST00000612349 RASSF8Q8NHQ8 419 aa25.74■■□□□ 1.71
SMAD6-205ENST00000612349 NCOA2Q15596 1464 aa25.71■■□□□ 1.71
SMAD6-205ENST00000612349 NESP48681 1621 aa25.71■■□□□ 1.71
SMAD6-205ENST00000612349 API5Q9BZZ5 524 aaKnown RBP25.71■■□□□ 1.71
SMAD6-205ENST00000612349 FYCO1Q9BQS8 1478 aa25.7■■□□□ 1.7
SMAD6-205ENST00000612349 ZBED9Q6R2W3 1325 aa25.69■■□□□ 1.7
SMAD6-205ENST00000612349 AFAP1Q8N556 730 aa25.69■■□□□ 1.7
SMAD6-205ENST00000612349 IPO9Q96P70 1041 aaKnown RBP25.69■■□□□ 1.7
SMAD6-205ENST00000612349 APAF1O14727 1248 aa25.69■■□□□ 1.7
SMAD6-205ENST00000612349 DDX58O95786 925 aaKnown RBP25.69■■□□□ 1.7
SMAD6-205ENST00000612349 ANKRD45Q5TZF3 282 aa25.68■■□□□ 1.7
SMAD6-205ENST00000612349 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
SMAD6-205ENST00000612349 GZF1Q9H116 711 aaPredicted RBP25.68■■□□□ 1.7
SMAD6-205ENST00000612349 C9orf78Q9NZ63 289 aaPredicted RBP25.68■■□□□ 1.7
SMAD6-205ENST00000612349 BCL2L13Q9BXK5 485 aa25.67■■□□□ 1.7
SMAD6-205ENST00000612349 DDX19BQ9UMR2 479 aa25.67■■□□□ 1.7
SMAD6-205ENST00000612349 PRG4Q92954 1404 aaPredicted RBP25.66■■□□□ 1.7
SMAD6-205ENST00000612349 SF3A1Q15459 793 aaKnown RBP25.66■■□□□ 1.7
SMAD6-205ENST00000612349 RILPL2Q969X0 211 aa25.66■■□□□ 1.7
SMAD6-205ENST00000612349 PHF14O94880 888 aa25.65■■□□□ 1.7
SMAD6-205ENST00000612349 MRC2Q9UBG0 1479 aa25.65■■□□□ 1.7
SMAD6-205ENST00000612349 RUFY2Q8WXA3 655 aa25.65■■□□□ 1.7
SMAD6-205ENST00000612349 NOL8Q76FK4 1167 aaKnown RBP25.65■■□□□ 1.7
SMAD6-205ENST00000612349 ERICH3Q5RHP9 1530 aa25.64■■□□□ 1.7
SMAD6-205ENST00000612349 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms