RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 STAC3Q96MF2 364 aa10.94□□□□□ -0.66
TMCO1-208ENST00000612311 ITPRIPQ8IWB1 547 aa10.94□□□□□ -0.66
TMCO1-208ENST00000612311 TRIM44Q96DX7 344 aaPredicted RBP10.94□□□□□ -0.66
TMCO1-208ENST00000612311 SMC4Q9NTJ3 1288 aa10.94□□□□□ -0.66
TMCO1-208ENST00000612311 IFT140Q96RY7 1462 aa10.94□□□□□ -0.66
TMCO1-208ENST00000612311 ABCA10Q8WWZ4 1543 aa10.93□□□□□ -0.66
TMCO1-208ENST00000612311 PEG3Q9GZU2 1588 aa10.93□□□□□ -0.66
TMCO1-208ENST00000612311 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
TMCO1-208ENST00000612311 RRP1P56182 461 aaKnown RBP10.93□□□□□ -0.66
TMCO1-208ENST00000612311 TROQ12816 1431 aaPredicted RBP10.92□□□□□ -0.66
TMCO1-208ENST00000612311 NBPF8Q3BBV2 869 aa10.92□□□□□ -0.66
TMCO1-208ENST00000612311 HSCBQ8IWL3 235 aa10.92□□□□□ -0.66
TMCO1-208ENST00000612311 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
TMCO1-208ENST00000612311 RRP7AQ9Y3A4 280 aaKnown RBP10.92□□□□□ -0.66
TMCO1-208ENST00000612311 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
TMCO1-208ENST00000612311 OS9Q13438 667 aaPredicted RBP10.92□□□□□ -0.66
TMCO1-208ENST00000612311 PLIN1O60240 522 aa10.92□□□□□ -0.66
TMCO1-208ENST00000612311 EXOC6Q8TAG9 804 aa10.92□□□□□ -0.66
TMCO1-208ENST00000612311 APAF1O14727 1248 aa10.91□□□□□ -0.66
TMCO1-208ENST00000612311 AFAP1Q8N556 730 aa10.91□□□□□ -0.66
TMCO1-208ENST00000612311 SYNJ2O15056 1496 aa10.91□□□□□ -0.66
TMCO1-208ENST00000612311 EVC2Q86UK5 1308 aa10.91□□□□□ -0.66
TMCO1-208ENST00000612311 IPO9Q96P70 1041 aaKnown RBP10.91□□□□□ -0.66
TMCO1-208ENST00000612311 CGNL1Q0VF96 1302 aa10.91□□□□□ -0.66
TMCO1-208ENST00000612311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.9□□□□□ -0.66
TMCO1-208ENST00000612311 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.66
TMCO1-208ENST00000612311 NAIPQ13075 1403 aa10.9□□□□□ -0.67
TMCO1-208ENST00000612311 E9PSI1 815 aa10.89□□□□□ -0.67
TMCO1-208ENST00000612311 PAK3O75914 559 aaPredicted RBP10.89□□□□□ -0.67
TMCO1-208ENST00000612311 DEKP35659 375 aaKnown RBP10.89□□□□□ -0.67
TMCO1-208ENST00000612311 KIAA1107Q9UPP5 1409 aa10.89□□□□□ -0.67
TMCO1-208ENST00000612311 APBB1O00213 710 aa10.88□□□□□ -0.67
TMCO1-208ENST00000612311 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
TMCO1-208ENST00000612311 EID1Q9Y6B2 187 aa10.88□□□□□ -0.67
TMCO1-208ENST00000612311 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
TMCO1-208ENST00000612311 SNAPC4Q5SXM2 1469 aa10.88□□□□□ -0.67
TMCO1-208ENST00000612311 CRBNQ96SW2 442 aa10.88□□□□□ -0.67
TMCO1-208ENST00000612311 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
TMCO1-208ENST00000612311 MINK1Q8N4C8 1332 aaPredicted RBP10.87□□□□□ -0.67
TMCO1-208ENST00000612311 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
TMCO1-208ENST00000612311 EPRSP07814 1512 aaKnown RBP10.87□□□□□ -0.67
TMCO1-208ENST00000612311 KIAA0586Q9BVV6 1533 aa10.87□□□□□ -0.67
TMCO1-208ENST00000612311 NUTM2FA1L443 756 aa10.87□□□□□ -0.67
TMCO1-208ENST00000612311 NGEFQ8N5V2 710 aa10.87□□□□□ -0.67
TMCO1-208ENST00000612311 BCL2L13Q9BXK5 485 aa10.87□□□□□ -0.67
TMCO1-208ENST00000612311 LMOD3Q0VAK6 560 aa10.86□□□□□ -0.67
TMCO1-208ENST00000612311 CENPQQ7L2Z9 268 aaPredicted RBP10.86□□□□□ -0.67
TMCO1-208ENST00000612311 ARHGAP5Q13017 1502 aa10.86□□□□□ -0.67
TMCO1-208ENST00000612311 HECW1Q76N89 1606 aa10.86□□□□□ -0.67
TMCO1-208ENST00000612311 NBPF1Q3BBV0 1214 aa10.86□□□□□ -0.67
TMCO1-208ENST00000612311 NGDNQ8NEJ9 315 aaKnown RBP10.86□□□□□ -0.67
TMCO1-208ENST00000612311 DAPK1P53355 1430 aa10.86□□□□□ -0.67
TMCO1-208ENST00000612311 MAP3K1Q13233 1512 aa10.86□□□□□ -0.67
TMCO1-208ENST00000612311 BRD4O60885 1362 aaPredicted RBP10.86□□□□□ -0.67
TMCO1-208ENST00000612311 WDR97A6NE52 1622 aa10.86□□□□□ -0.67
TMCO1-208ENST00000612311 KCNJ4P48050 445 aa10.86□□□□□ -0.67
TMCO1-208ENST00000612311 PDE4AP27815 886 aa10.85□□□□□ -0.67
TMCO1-208ENST00000612311 SLKQ9H2G2 1235 aaPredicted RBP10.85□□□□□ -0.67
TMCO1-208ENST00000612311 PCF11O94913 1555 aaKnown RBP10.85□□□□□ -0.67
TMCO1-208ENST00000612311 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
TMCO1-208ENST00000612311 STK31Q9BXU1 1019 aa10.84□□□□□ -0.67
TMCO1-208ENST00000612311 CDK13Q14004 1512 aaKnown RBP10.84□□□□□ -0.67
TMCO1-208ENST00000612311 SUPT6HQ7KZ85 1726 aaKnown RBP10.84□□□□□ -0.67
TMCO1-208ENST00000612311 CFAP70Q5T0N1 1121 aa10.84□□□□□ -0.67
TMCO1-208ENST00000612311 MCCP23508 829 aa10.83□□□□□ -0.68
TMCO1-208ENST00000612311 COG6Q9Y2V7 657 aa10.83□□□□□ -0.68
TMCO1-208ENST00000612311 PTMAP06454 111 aaKnown RBP10.83□□□□□ -0.68
TMCO1-208ENST00000612311 MFAP1P55081 439 aaKnown RBP10.83□□□□□ -0.68
TMCO1-208ENST00000612311 LAMC3Q9Y6N6 1575 aa10.83□□□□□ -0.68
TMCO1-208ENST00000612311 ROCK1Q13464 1354 aa10.82□□□□□ -0.68
TMCO1-208ENST00000612311 AMPHP49418 695 aa10.82□□□□□ -0.68
TMCO1-208ENST00000612311 ZKSCAN2Q63HK3 967 aa10.82□□□□□ -0.68
TMCO1-208ENST00000612311 RTN4Q9NQC3 1192 aaKnown RBP10.82□□□□□ -0.68
TMCO1-208ENST00000612311 FGD1P98174 961 aa10.82□□□□□ -0.68
TMCO1-208ENST00000612311 CHMP4AQ9BY43 222 aa10.82□□□□□ -0.68
TMCO1-208ENST00000612311 ELL2O00472 640 aaPredicted RBP10.82□□□□□ -0.68
TMCO1-208ENST00000612311 COG3Q96JB2 828 aa10.82□□□□□ -0.68
TMCO1-208ENST00000612311 ADAMTS8Q9UP79 889 aa10.82□□□□□ -0.68
TMCO1-208ENST00000612311 TMEM132EQ6IEE7 984 aa10.81□□□□□ -0.68
TMCO1-208ENST00000612311 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
TMCO1-208ENST00000612311 IQGAP2Q13576 1575 aa10.81□□□□□ -0.68
TMCO1-208ENST00000612311 HMMRO75330 724 aa10.8□□□□□ -0.68
TMCO1-208ENST00000612311 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
TMCO1-208ENST00000612311 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
TMCO1-208ENST00000612311 DIAPH1O60610 1272 aaKnown RBP10.8□□□□□ -0.68
TMCO1-208ENST00000612311 SLC4A10Q6U841 1118 aa10.8□□□□□ -0.68
TMCO1-208ENST00000612311 RUNDC1Q96C34 613 aa10.8□□□□□ -0.68
TMCO1-208ENST00000612311 PLEKHH2Q8IVE3 1493 aa10.8□□□□□ -0.68
TMCO1-208ENST00000612311 CUL7Q14999 1698 aa10.8□□□□□ -0.68
TMCO1-208ENST00000612311 CCDC184Q52MB2 194 aa10.8□□□□□ -0.68
TMCO1-208ENST00000612311 FAM69CQ0P6D2 419 aa10.79□□□□□ -0.68
TMCO1-208ENST00000612311 GLIPR1L2Q4G1C9 344 aa10.79□□□□□ -0.68
TMCO1-208ENST00000612311 PNISRQ8TF01 805 aaKnown RBP10.79□□□□□ -0.68
TMCO1-208ENST00000612311 ZRSR1Q15695 479 aaKnown RBP10.79□□□□□ -0.68
TMCO1-208ENST00000612311 L1TD1Q5T7N2 865 aaKnown RBP10.79□□□□□ -0.68
TMCO1-208ENST00000612311 LTV1Q96GA3 475 aaPredicted RBP10.79□□□□□ -0.68
TMCO1-208ENST00000612311 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
TMCO1-208ENST00000612311 CSB-PGBD3P0DP91 1061 aa10.78□□□□□ -0.68
TMCO1-208ENST00000612311 PPP2R1AP30153 589 aa10.78□□□□□ -0.68
TMCO1-208ENST00000612311 ANKRD30BQ9BXX2 1392 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms