RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 FAM184AQ8NB25 1140 aa15.22■□□□□ 0.03
HLCS-207ENST00000612277 TSPYL1Q9H0U9 437 aa15.22■□□□□ 0.03
HLCS-207ENST00000612277 IFT57Q9NWB7 429 aa15.22■□□□□ 0.03
HLCS-207ENST00000612277 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
HLCS-207ENST00000612277 MORC1Q86VD1 984 aa15.22■□□□□ 0.03
HLCS-207ENST00000612277 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.22■□□□□ 0.03
HLCS-207ENST00000612277 CCDC39Q9UFE4 941 aa15.2■□□□□ 0.02
HLCS-207ENST00000612277 KTN1Q86UP2 1357 aaKnown RBP15.19■□□□□ 0.02
HLCS-207ENST00000612277 CCDC47Q96A33 483 aaKnown RBP15.19■□□□□ 0.02
HLCS-207ENST00000612277 RSF1Q96T23 1441 aaPredicted RBP15.19■□□□□ 0.02
HLCS-207ENST00000612277 NEFHP12036 1026 aa15.18■□□□□ 0.02
HLCS-207ENST00000612277 HDAC5Q9UQL6 1122 aa15.17■□□□□ 0.02
HLCS-207ENST00000612277 HOOK1Q9UJC3 728 aaKnown RBP15.17■□□□□ 0.02
HLCS-207ENST00000612277 NAP1L1P55209 391 aaKnown RBP15.16■□□□□ 0.02
HLCS-207ENST00000612277 FAM161AQ3B820 660 aa15.16■□□□□ 0.02
HLCS-207ENST00000612277 DYDC1Q8WWB3 177 aa15.16■□□□□ 0.02
HLCS-207ENST00000612277 TOMM22Q9NS69 142 aa15.16■□□□□ 0.02
HLCS-207ENST00000612277 INCENPQ9NQS7 918 aa15.16■□□□□ 0.02
HLCS-207ENST00000612277 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
HLCS-207ENST00000612277 USP8P40818 1118 aa15.16■□□□□ 0.02
HLCS-207ENST00000612277 SLC4A3P48751 1232 aa15.16■□□□□ 0.02
HLCS-207ENST00000612277 FOXD4L6Q3SYB3 417 aaPredicted RBP15.16■□□□□ 0.02
HLCS-207ENST00000612277 FOXD4L3Q6VB84 417 aaPredicted RBP15.16■□□□□ 0.02
HLCS-207ENST00000612277 CLIP1P30622 1438 aa15.15■□□□□ 0.02
HLCS-207ENST00000612277 KIAA0754O94854 1291 aa15.15■□□□□ 0.02
HLCS-207ENST00000612277 CCDC173Q0VFZ6 552 aa15.15■□□□□ 0.02
HLCS-207ENST00000612277 ZNF526Q8TF50 670 aaPredicted RBP15.15■□□□□ 0.02
HLCS-207ENST00000612277 CAGE1Q8TC20 777 aa15.15■□□□□ 0.02
HLCS-207ENST00000612277 GOLGA6L7A0A1B0GV03 622 aa15.15■□□□□ 0.02
HLCS-207ENST00000612277 AKAP17AQ02040 695 aaKnown RBP15.14■□□□□ 0.01
HLCS-207ENST00000612277 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.14■□□□□ 0.014e-8■■■■■ 170.1
HLCS-207ENST00000612277 CHMP4AQ9BY43 222 aa15.14■□□□□ 0.01
HLCS-207ENST00000612277 SMC4Q9NTJ3 1288 aa15.14■□□□□ 0.01
HLCS-207ENST00000612277 MCTP1Q6DN14 999 aa15.13■□□□□ 0.01
HLCS-207ENST00000612277 SASS6Q6UVJ0 657 aa15.13■□□□□ 0.01
HLCS-207ENST00000612277 CHMP3Q9Y3E7 222 aa15.13■□□□□ 0.01
HLCS-207ENST00000612277 PDE4AP27815 886 aa15.13■□□□□ 0.01
HLCS-207ENST00000612277 STK31Q9BXU1 1019 aa15.13■□□□□ 0.01
HLCS-207ENST00000612277 TAF3Q5VWG9 929 aa15.13■□□□□ 0.01
HLCS-207ENST00000612277 DEF6Q9H4E7 631 aa15.13■□□□□ 0.01
HLCS-207ENST00000612277 FANCIQ9NVI1 1328 aa15.12■□□□□ 0.01
HLCS-207ENST00000612277 SIN3AQ96ST3 1273 aa15.12■□□□□ 0.01
HLCS-207ENST00000612277 KRI1Q8N9T8 703 aaKnown RBP15.12■□□□□ 0.01
HLCS-207ENST00000612277 TMX4Q9H1E5 349 aaPredicted RBP15.12■□□□□ 0.01
HLCS-207ENST00000612277 BICD2Q8TD16 824 aa15.11■□□□□ 0.01
HLCS-207ENST00000612277 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
HLCS-207ENST00000612277 HSP90AB2PQ58FF8 381 aa15.11■□□□□ 0.01
HLCS-207ENST00000612277 AXDND1Q5T1B0 1012 aaPredicted RBP15.11■□□□□ 0.01
HLCS-207ENST00000612277 CT47A1Q5JQC4 288 aaPredicted RBP15.1■□□□□ 0.01
HLCS-207ENST00000612277 BCL11BQ9C0K0 894 aaPredicted RBP15.1■□□□□ 0.01
HLCS-207ENST00000612277 CHMP5Q9NZZ3 219 aa15.1■□□□□ 0.01
HLCS-207ENST00000612277 CENPQQ7L2Z9 268 aaPredicted RBP15.1■□□□□ 0.01
HLCS-207ENST00000612277 TRIM29Q14134 588 aa15.1■□□□□ 0.01
HLCS-207ENST00000612277 ODF2Q5BJF6 829 aa15.09■□□□□ 0.01
HLCS-207ENST00000612277 MRE11P49959 708 aa15.09■□□□□ 0.01
HLCS-207ENST00000612277 RALBP1Q15311 655 aa15.08■□□□□ 0.01
HLCS-207ENST00000612277 GIMAP7Q8NHV1 300 aa15.08■□□□□ 0.01
HLCS-207ENST00000612277 SYNE3Q6ZMZ3 975 aa15.08■□□□□ 0
HLCS-207ENST00000612277 RBM10P98175 930 aaKnown RBP15.08■□□□□ 0
HLCS-207ENST00000612277 SKIDA1Q1XH10 827 aa15.08■□□□□ 0
HLCS-207ENST00000612277 CCP110O43303 1012 aa15.07■□□□□ 0
HLCS-207ENST00000612277 CENPJQ9HC77 1338 aaPredicted RBP15.07■□□□□ 0
HLCS-207ENST00000612277 SOX12O15370 315 aa15.07■□□□□ 0
HLCS-207ENST00000612277 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
HLCS-207ENST00000612277 HMGN5P82970 282 aaKnown RBP15.07■□□□□ 0
HLCS-207ENST00000612277 SRPK2P78362 688 aaKnown RBP15.06■□□□□ 0
HLCS-207ENST00000612277 NASPP49321 788 aaPredicted RBP15.06■□□□□ 0
HLCS-207ENST00000612277 RILPL2Q969X0 211 aa15.06■□□□□ 0
HLCS-207ENST00000612277 TCEAL9Q9UHQ7 104 aa15.06■□□□□ 0
HLCS-207ENST00000612277 SPAG9O60271 1321 aaKnown RBP15.06■□□□□ 0
HLCS-207ENST00000612277 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
HLCS-207ENST00000612277 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
HLCS-207ENST00000612277 ZNF330Q9Y3S2 320 aaPredicted RBP15.05■□□□□ 0
HLCS-207ENST00000612277 CPLX2Q6PUV4 134 aaKnown RBP15.05■□□□□ -0
HLCS-207ENST00000612277 NAT10Q9H0A0 1025 aaKnown RBP15.04■□□□□ -0
HLCS-207ENST00000612277 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
HLCS-207ENST00000612277 HSPA5P11021 654 aaKnown RBP15.04■□□□□ -0
HLCS-207ENST00000612277 PDILTQ8N807 584 aa15.04■□□□□ -0
HLCS-207ENST00000612277 GOLGA6L10A6NI86 522 aa15.04■□□□□ -0
HLCS-207ENST00000612277 FBXW7Q969H0 707 aa15.04■□□□□ -0
HLCS-207ENST00000612277 PDE3BQ13370 1112 aa15.03■□□□□ -0
HLCS-207ENST00000612277 CLUAP1Q96AJ1 413 aa15.03■□□□□ -0
HLCS-207ENST00000612277 EEA1Q15075 1411 aa15.03■□□□□ -0
HLCS-207ENST00000612277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
HLCS-207ENST00000612277 NUCB2P80303 420 aa15.03■□□□□ -0
HLCS-207ENST00000612277 HDGFL2Q7Z4V5 671 aaPredicted RBP15.02■□□□□ -0
HLCS-207ENST00000612277 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.02■□□□□ -05e-6■□□□□ 8.4
HLCS-207ENST00000612277 ZCCHC6Q5VYS8 1495 aaKnown RBP15.02■□□□□ -0
HLCS-207ENST00000612277 OLFM4Q6UX06 510 aa15.02■□□□□ -0
HLCS-207ENST00000612277 CCDC73Q6ZRK6 1079 aa15.02□□□□□ -0.01
HLCS-207ENST00000612277 G3V3G9 751 aa15.01□□□□□ -0.01
HLCS-207ENST00000612277 ERLIN2O94905 339 aa15.01□□□□□ -0.01
HLCS-207ENST00000612277 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
HLCS-207ENST00000612277 ANKRD18AQ8IVF6 992 aa15.01□□□□□ -0.01
HLCS-207ENST00000612277 DCAF11Q8TEB1 546 aa15.01□□□□□ -0.01
HLCS-207ENST00000612277 RRP9O43818 475 aaKnown RBP15.01□□□□□ -0.01
HLCS-207ENST00000612277 CLASRPQ8N2M8 674 aaKnown RBP15.01□□□□□ -0.01
HLCS-207ENST00000612277 PLEKHD1A6NEE1 506 aa15.01□□□□□ -0.01
HLCS-207ENST00000612277 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
HLCS-207ENST00000612277 EIF3JO75822 258 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms