RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 PLEKHH2Q8IVE3 1493 aa23.58■■□□□ 1.37
NEK3-206ENST00000611833 CLASP1Q7Z460 1538 aa23.58■■□□□ 1.37
NEK3-206ENST00000611833 ZCCHC11Q5TAX3 1644 aaKnown RBP23.57■■□□□ 1.36
NEK3-206ENST00000611833 ZBED9Q6R2W3 1325 aa23.57■■□□□ 1.36
NEK3-206ENST00000611833 CNGB1Q14028 1251 aaPredicted RBP23.56■■□□□ 1.36
NEK3-206ENST00000611833 CCDC144AA2RUR9 1427 aa23.55■■□□□ 1.36
NEK3-206ENST00000611833 PLA2R1Q13018 1463 aa23.54■■□□□ 1.36
NEK3-206ENST00000611833 PLCH2O75038 1416 aa23.53■■□□□ 1.36
NEK3-206ENST00000611833 IQGAP3Q86VI3 1631 aa23.53■■□□□ 1.36
NEK3-206ENST00000611833 ST20-MTHFSA0A0A6YYL1 179 aa23.53■■□□□ 1.36
NEK3-206ENST00000611833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.53■■□□□ 1.367e-6■■■□□ 15
NEK3-206ENST00000611833 UHRF1BP1LA0JNW5 1464 aa23.52■■□□□ 1.36
NEK3-206ENST00000611833 ROCK2O75116 1388 aaKnown RBP23.52■■□□□ 1.36
NEK3-206ENST00000611833 DUOX2Q9NRD8 1548 aa23.51■■□□□ 1.35
NEK3-206ENST00000611833 ERICH6BQ5W0A0 696 aa23.5■■□□□ 1.35
NEK3-206ENST00000611833 TRPM1Q7Z4N2 1603 aa23.5■■□□□ 1.35
NEK3-206ENST00000611833 PRAG1Q86YV5 1406 aa23.49■■□□□ 1.35
NEK3-206ENST00000611833 MAGI2Q86UL8 1455 aa23.47■■□□□ 1.35
NEK3-206ENST00000611833 RBM19Q9Y4C8 960 aaKnown RBP23.47■■□□□ 1.35
NEK3-206ENST00000611833 ABCC1P33527 1531 aa23.47■■□□□ 1.35
NEK3-206ENST00000611833 ERBINQ96RT1 1412 aa23.46■■□□□ 1.35
NEK3-206ENST00000611833 RGL3Q3MIN7 710 aa23.46■■□□□ 1.35
NEK3-206ENST00000611833 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
NEK3-206ENST00000611833 A2MP01023 1474 aa23.46■■□□□ 1.35
NEK3-206ENST00000611833 TRAPPC8Q9Y2L5 1435 aa23.43■■□□□ 1.34
NEK3-206ENST00000611833 PPP4R2Q9NY27 417 aa23.42■■□□□ 1.34
NEK3-206ENST00000611833 E9PCH4 1651 aa23.42■■□□□ 1.34
NEK3-206ENST00000611833 ATP10AO60312 1499 aa23.41■■□□□ 1.34
NEK3-206ENST00000611833 NBPF1Q3BBV0 1214 aa23.4■■□□□ 1.34
NEK3-206ENST00000611833 TMC1Q8TDI8 760 aa23.39■■□□□ 1.33
NEK3-206ENST00000611833 GPRASP1Q5JY77 1395 aa23.39■■□□□ 1.33
NEK3-206ENST00000611833 LAMC1P11047 1609 aa23.36■■□□□ 1.33
NEK3-206ENST00000611833 ARAP3Q8WWN8 1544 aa23.35■■□□□ 1.33
NEK3-206ENST00000611833 PNISRQ8TF01 805 aaKnown RBP23.34■■□□□ 1.33
NEK3-206ENST00000611833 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
NEK3-206ENST00000611833 SMG6Q86US8 1419 aaKnown RBP23.33■■□□□ 1.32
NEK3-206ENST00000611833 EIF2AK4Q9P2K8 1649 aaKnown RBP23.33■■□□□ 1.32
NEK3-206ENST00000611833 SPAG9O60271 1321 aaKnown RBP23.32■■□□□ 1.32
NEK3-206ENST00000611833 ZFYVE16Q7Z3T8 1539 aa23.32■■□□□ 1.32
NEK3-206ENST00000611833 AFAP1Q8N556 730 aa23.32■■□□□ 1.32
NEK3-206ENST00000611833 ANP32EQ9BTT0 268 aa23.32■■□□□ 1.32
NEK3-206ENST00000611833 RALBP1Q15311 655 aa23.31■■□□□ 1.32
NEK3-206ENST00000611833 RTEL1-TNFRSF6BF6WH68 1400 aa23.31■■□□□ 1.32
NEK3-206ENST00000611833 KTN1Q86UP2 1357 aaKnown RBP23.31■■□□□ 1.32
NEK3-206ENST00000611833 NUDCQ9Y266 331 aa23.3■■□□□ 1.32
NEK3-206ENST00000611833 MYBBP1AQ9BQG0 1328 aaKnown RBP23.29■■□□□ 1.32
NEK3-206ENST00000611833 WDR7Q9Y4E6 1490 aa23.29■■□□□ 1.32
NEK3-206ENST00000611833 COL17A1Q9UMD9 1497 aaPredicted RBP23.28■■□□□ 1.32
NEK3-206ENST00000611833 BRD4O60885 1362 aaPredicted RBP23.27■■□□□ 1.32
NEK3-206ENST00000611833 TESK2Q96S53 571 aa23.27■■□□□ 1.32
NEK3-206ENST00000611833 B4GALNT3Q6L9W6 998 aa23.27■■□□□ 1.32
NEK3-206ENST00000611833 LRPPRCP42704 1394 aaKnown RBP23.25■■□□□ 1.31
NEK3-206ENST00000611833 DISP3Q9P2K9 1392 aa23.25■■□□□ 1.31
NEK3-206ENST00000611833 ABCA9Q8IUA7 1624 aa23.25■■□□□ 1.31
NEK3-206ENST00000611833 RNF17Q9BXT8 1623 aaKnown RBP23.25■■□□□ 1.31
NEK3-206ENST00000611833 SENP3-EIF4A1A0A087X0R7 540 aa23.24■■□□□ 1.31
NEK3-206ENST00000611833 DEPDC5O75140 1603 aa23.24■■□□□ 1.31
NEK3-206ENST00000611833 FANCAO15360 1455 aa23.24■■□□□ 1.31
NEK3-206ENST00000611833 PER1O15534 1290 aaPredicted RBP23.23■■□□□ 1.31
NEK3-206ENST00000611833 PARD3Q8TEW0 1356 aa23.22■■□□□ 1.31
NEK3-206ENST00000611833 TRPM2O94759 1503 aa23.22■■□□□ 1.31
NEK3-206ENST00000611833 INO80Q9ULG1 1556 aaPredicted RBP23.22■■□□□ 1.31
NEK3-206ENST00000611833 ATP7AQ04656 1500 aa23.21■■□□□ 1.31
NEK3-206ENST00000611833 SPHKAPQ2M3C7 1700 aa23.21■■□□□ 1.31
NEK3-206ENST00000611833 MADDQ8WXG6 1647 aa23.2■■□□□ 1.3
NEK3-206ENST00000611833 CEP152O94986 1710 aa23.19■■□□□ 1.3
NEK3-206ENST00000611833 PTPRTO14522 1441 aa23.18■■□□□ 1.3
NEK3-206ENST00000611833 TET3O43151 1660 aa23.18■■□□□ 1.3
NEK3-206ENST00000611833 NLRP13Q86W25 1043 aa23.17■■□□□ 1.3
NEK3-206ENST00000611833 CLTCL1P53675 1640 aa23.17■■□□□ 1.3
NEK3-206ENST00000611833 TMF1P82094 1093 aa23.16■■□□□ 1.3
NEK3-206ENST00000611833 ADGRL1O94910 1474 aa23.16■■□□□ 1.3
NEK3-206ENST00000611833 RNF123Q5XPI4 1314 aa23.16■■□□□ 1.3
NEK3-206ENST00000611833 VWDEQ8N2E2 1590 aa23.15■■□□□ 1.3
NEK3-206ENST00000611833 SCAPERQ9BY12 1400 aa23.14■■□□□ 1.3
NEK3-206ENST00000611833 PANK3Q9H999 370 aa23.13■■□□□ 1.29
NEK3-206ENST00000611833 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
NEK3-206ENST00000611833 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
NEK3-206ENST00000611833 FANCIQ9NVI1 1328 aa23.13■■□□□ 1.29
NEK3-206ENST00000611833 WASHC2CQ9Y4E1 1318 aa23.13■■□□□ 1.29
NEK3-206ENST00000611833 KIF3BO15066 747 aa23.11■■□□□ 1.29
NEK3-206ENST00000611833 KANK1Q14678 1352 aa23.11■■□□□ 1.29
NEK3-206ENST00000611833 CC2D1BQ5T0F9 858 aaKnown RBP23.1■■□□□ 1.29
NEK3-206ENST00000611833 MROH1Q8NDA8 1641 aa23.09■■□□□ 1.29
NEK3-206ENST00000611833 MYT1LQ9UL68 1186 aa23.09■■□□□ 1.29
NEK3-206ENST00000611833 CCDC136Q96JN2 1154 aa23.08■■□□□ 1.28
NEK3-206ENST00000611833 STAC3Q96MF2 364 aa23.07■■□□□ 1.28
NEK3-206ENST00000611833 SALL2Q9Y467 1007 aaPredicted RBP23.06■■□□□ 1.28
NEK3-206ENST00000611833 MSH5O43196 834 aa23.05■■□□□ 1.28
NEK3-206ENST00000611833 SCAF11Q99590 1463 aaKnown RBP23.05■■□□□ 1.28
NEK3-206ENST00000611833 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
NEK3-206ENST00000611833 NEURL4Q96JN8 1562 aa23.02■■□□□ 1.28
NEK3-206ENST00000611833 UGGT1Q9NYU2 1555 aa23.02■■□□□ 1.28
NEK3-206ENST00000611833 PDE3BQ13370 1112 aa23.01■■□□□ 1.27
NEK3-206ENST00000611833 EFCAB6Q5THR3 1501 aa23■■□□□ 1.27
NEK3-206ENST00000611833 KIAA1210Q9ULL0 1709 aa22.99■■□□□ 1.27
NEK3-206ENST00000611833 ZNF518AQ6AHZ1 1483 aa22.98■■□□□ 1.27
NEK3-206ENST00000611833 RCAN3Q9UKA8 241 aa22.98■■□□□ 1.27
NEK3-206ENST00000611833 RRP1P56182 461 aaKnown RBP22.97■■□□□ 1.27
NEK3-206ENST00000611833 SYNMO15061 1565 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms