RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 KTN1Q86UP2 1357 aaKnown RBP20.17■□□□□ 0.82
PCDHGB1-202ENST00000611598 CDC42BPAQ5VT25 1732 aa20.17■□□□□ 0.82
PCDHGB1-202ENST00000611598 CDCA7LQ96GN5 454 aa20.16■□□□□ 0.82
PCDHGB1-202ENST00000611598 CEP170Q5SW79 1584 aa20.16■□□□□ 0.82
PCDHGB1-202ENST00000611598 NLRP13Q86W25 1043 aa20.15■□□□□ 0.82
PCDHGB1-202ENST00000611598 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
PCDHGB1-202ENST00000611598 PDE4AP27815 886 aa20.14■□□□□ 0.82
PCDHGB1-202ENST00000611598 PARD3Q8TEW0 1356 aa20.14■□□□□ 0.81
PCDHGB1-202ENST00000611598 KDM5DQ9BY66 1539 aa20.13■□□□□ 0.81
PCDHGB1-202ENST00000611598 SHANK2Q9UPX8 1470 aa20.12■□□□□ 0.81
PCDHGB1-202ENST00000611598 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
PCDHGB1-202ENST00000611598 PLIN1O60240 522 aa20.12■□□□□ 0.81
PCDHGB1-202ENST00000611598 SKAP1Q86WV1 359 aa20.11■□□□□ 0.81
PCDHGB1-202ENST00000611598 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
PCDHGB1-202ENST00000611598 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
PCDHGB1-202ENST00000611598 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.81
PCDHGB1-202ENST00000611598 BACH2Q9BYV9 841 aa20.1■□□□□ 0.81
PCDHGB1-202ENST00000611598 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
PCDHGB1-202ENST00000611598 PTPRGP23470 1445 aa20.1■□□□□ 0.81
PCDHGB1-202ENST00000611598 ABCC10Q5T3U5 1492 aa20.1■□□□□ 0.81
PCDHGB1-202ENST00000611598 PER1O15534 1290 aaPredicted RBP20.09■□□□□ 0.81
PCDHGB1-202ENST00000611598 NBPF1Q3BBV0 1214 aa20.09■□□□□ 0.81
PCDHGB1-202ENST00000611598 PLEKHD1A6NEE1 506 aa20.09■□□□□ 0.81
PCDHGB1-202ENST00000611598 PDE3BQ13370 1112 aa20.08■□□□□ 0.81
PCDHGB1-202ENST00000611598 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
PCDHGB1-202ENST00000611598 FBLN2P98095 1184 aa20.07■□□□□ 0.8
PCDHGB1-202ENST00000611598 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
PCDHGB1-202ENST00000611598 PRAG1Q86YV5 1406 aa20.07■□□□□ 0.8
PCDHGB1-202ENST00000611598 RGL3Q3MIN7 710 aa20.06■□□□□ 0.8
PCDHGB1-202ENST00000611598 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
PCDHGB1-202ENST00000611598 TRPM1Q7Z4N2 1603 aa20.05■□□□□ 0.8
PCDHGB1-202ENST00000611598 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
PCDHGB1-202ENST00000611598 MS4A1P11836 297 aa20.04■□□□□ 0.8
PCDHGB1-202ENST00000611598 ATP10BO94823 1461 aa20.04■□□□□ 0.8
PCDHGB1-202ENST00000611598 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
PCDHGB1-202ENST00000611598 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
PCDHGB1-202ENST00000611598 CRBNQ96SW2 442 aa20.03■□□□□ 0.8
PCDHGB1-202ENST00000611598 DISP3Q9P2K9 1392 aa20.03■□□□□ 0.8
PCDHGB1-202ENST00000611598 NEFMP07197 916 aa20.02■□□□□ 0.8
PCDHGB1-202ENST00000611598 ABCA8O94911 1581 aa20.02■□□□□ 0.8
PCDHGB1-202ENST00000611598 CCDC144AA2RUR9 1427 aa20.01■□□□□ 0.79
PCDHGB1-202ENST00000611598 COL17A1Q9UMD9 1497 aaPredicted RBP20.01■□□□□ 0.79
PCDHGB1-202ENST00000611598 TESK2Q96S53 571 aa20■□□□□ 0.79
PCDHGB1-202ENST00000611598 BLMP54132 1417 aaPredicted RBP20■□□□□ 0.79
PCDHGB1-202ENST00000611598 SYNJ2O15056 1496 aa20■□□□□ 0.79
PCDHGB1-202ENST00000611598 PANK3Q9H999 370 aa19.99■□□□□ 0.79
PCDHGB1-202ENST00000611598 C20orf194Q5TEA3 1177 aa19.98■□□□□ 0.79
PCDHGB1-202ENST00000611598 IL27Q8NEV9 243 aa19.98■□□□□ 0.79
PCDHGB1-202ENST00000611598 A2MP01023 1474 aa19.98■□□□□ 0.79
PCDHGB1-202ENST00000611598 PLA2R1Q13018 1463 aa19.97■□□□□ 0.79
PCDHGB1-202ENST00000611598 GPRASP1Q5JY77 1395 aa19.97■□□□□ 0.79
PCDHGB1-202ENST00000611598 ARHGEF5Q12774 1597 aa19.97■□□□□ 0.79
PCDHGB1-202ENST00000611598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.94■□□□□ 0.78
PCDHGB1-202ENST00000611598 CCDC141Q6ZP82 1450 aa19.94■□□□□ 0.78
PCDHGB1-202ENST00000611598 NUP160Q12769 1436 aa19.94■□□□□ 0.78
PCDHGB1-202ENST00000611598 SAMD9LQ8IVG5 1584 aa19.94■□□□□ 0.78
PCDHGB1-202ENST00000611598 PRDM15P57071 1507 aaPredicted RBP19.93■□□□□ 0.78
PCDHGB1-202ENST00000611598 ERBINQ96RT1 1412 aa19.93■□□□□ 0.78
PCDHGB1-202ENST00000611598 WASHC2CQ9Y4E1 1318 aa19.93■□□□□ 0.78
PCDHGB1-202ENST00000611598 USP35Q9P2H5 1018 aa19.92■□□□□ 0.78
PCDHGB1-202ENST00000611598 ZMYM4Q5VZL5 1548 aa19.92■□□□□ 0.78
PCDHGB1-202ENST00000611598 ADAMTS8Q9UP79 889 aa19.91■□□□□ 0.78
PCDHGB1-202ENST00000611598 INSRP06213 1382 aa19.9■□□□□ 0.78
PCDHGB1-202ENST00000611598 PPM1GO15355 546 aaPredicted RBP19.9■□□□□ 0.78
PCDHGB1-202ENST00000611598 RTN4Q9NQC3 1192 aaKnown RBP19.9■□□□□ 0.78
PCDHGB1-202ENST00000611598 KDM2BQ8NHM5 1336 aa19.88■□□□□ 0.77
PCDHGB1-202ENST00000611598 TMF1P82094 1093 aa19.88■□□□□ 0.77
PCDHGB1-202ENST00000611598 CDC42BPBQ9Y5S2 1711 aa19.88■□□□□ 0.77
PCDHGB1-202ENST00000611598 PLEKHH1Q9ULM0 1364 aa19.88■□□□□ 0.77
PCDHGB1-202ENST00000611598 SLC4A3P48751 1232 aa19.88■□□□□ 0.77
PCDHGB1-202ENST00000611598 PLEKHH2Q8IVE3 1493 aa19.87■□□□□ 0.77
PCDHGB1-202ENST00000611598 LAMC1P11047 1609 aa19.87■□□□□ 0.77
PCDHGB1-202ENST00000611598 MYO5CQ9NQX4 1742 aa19.86■□□□□ 0.77
PCDHGB1-202ENST00000611598 DDRGK1Q96HY6 314 aa19.86■□□□□ 0.77
PCDHGB1-202ENST00000611598 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
PCDHGB1-202ENST00000611598 DUSP27Q5VZP5 1158 aa19.85■□□□□ 0.77
PCDHGB1-202ENST00000611598 UNC13BO14795 1591 aa19.85■□□□□ 0.77
PCDHGB1-202ENST00000611598 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
PCDHGB1-202ENST00000611598 ANO8Q9HCE9 1232 aaPredicted RBP19.84■□□□□ 0.77
PCDHGB1-202ENST00000611598 MAGI2Q86UL8 1455 aa19.84■□□□□ 0.77
PCDHGB1-202ENST00000611598 PPP2R1AP30153 589 aa19.82■□□□□ 0.76
PCDHGB1-202ENST00000611598 EIF2AK4Q9P2K8 1649 aaKnown RBP19.81■□□□□ 0.76
PCDHGB1-202ENST00000611598 RSPH4AQ5TD94 716 aa19.81■□□□□ 0.76
PCDHGB1-202ENST00000611598 CENPQQ7L2Z9 268 aaPredicted RBP19.81■□□□□ 0.76
PCDHGB1-202ENST00000611598 WDR7Q9Y4E6 1490 aa19.8■□□□□ 0.76
PCDHGB1-202ENST00000611598 WDR43Q15061 677 aaKnown RBP eCLIP19.8■□□□□ 0.76
PCDHGB1-202ENST00000611598 NFKBIBQ15653 356 aa19.8■□□□□ 0.76
PCDHGB1-202ENST00000611598 C8orf34Q49A92 452 aa19.79■□□□□ 0.76
PCDHGB1-202ENST00000611598 ZNF521Q96K83 1311 aa19.79■□□□□ 0.76
PCDHGB1-202ENST00000611598 IQGAP3Q86VI3 1631 aa19.78■□□□□ 0.76
PCDHGB1-202ENST00000611598 KNSTRNQ9Y448 316 aa19.78■□□□□ 0.76
PCDHGB1-202ENST00000611598 AMER1Q5JTC6 1135 aaPredicted RBP19.77■□□□□ 0.76
PCDHGB1-202ENST00000611598 ARHGAP5Q13017 1502 aa19.77■□□□□ 0.75
PCDHGB1-202ENST00000611598 GOLGA2Q08379 1002 aa19.76■□□□□ 0.75
PCDHGB1-202ENST00000611598 TTC37Q6PGP7 1564 aa19.76■□□□□ 0.75
PCDHGB1-202ENST00000611598 RNF17Q9BXT8 1623 aaKnown RBP19.76■□□□□ 0.75
PCDHGB1-202ENST00000611598 FAM161AQ3B820 660 aa19.76■□□□□ 0.75
PCDHGB1-202ENST00000611598 MAST1Q9Y2H9 1570 aa19.75■□□□□ 0.75
PCDHGB1-202ENST00000611598 RGS3P49796 1198 aa19.75■□□□□ 0.75
PCDHGB1-202ENST00000611598 CCDC146Q8IYE0 955 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms