RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 SLIT1O75093 1534 aa11.67□□□□□ -0.54
CBWD1-219ENST00000611457 DHX29Q7Z478 1369 aaKnown RBP11.66□□□□□ -0.54
CBWD1-219ENST00000611457 NWD1Q149M9 1564 aa11.66□□□□□ -0.54
CBWD1-219ENST00000611457 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
CBWD1-219ENST00000611457 NLRP1Q9C000 1473 aa11.65□□□□□ -0.54
CBWD1-219ENST00000611457 CEP170BQ9Y4F5 1589 aaPredicted RBP11.65□□□□□ -0.54
CBWD1-219ENST00000611457 CCNB3Q8WWL7 1395 aa11.65□□□□□ -0.54
CBWD1-219ENST00000611457 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
CBWD1-219ENST00000611457 ACIN1Q9UKV3 1341 aaKnown RBP11.65□□□□□ -0.54
CBWD1-219ENST00000611457 DIP2AQ14689 1571 aa11.65□□□□□ -0.54
CBWD1-219ENST00000611457 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.55
CBWD1-219ENST00000611457 DAPK1P53355 1430 aa11.64□□□□□ -0.55
CBWD1-219ENST00000611457 PTPRKQ15262 1439 aa11.64□□□□□ -0.55
CBWD1-219ENST00000611457 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
CBWD1-219ENST00000611457 SPHKAPQ2M3C7 1700 aa11.62□□□□□ -0.55
CBWD1-219ENST00000611457 ABCC5O15440 1437 aa11.61□□□□□ -0.55
CBWD1-219ENST00000611457 A2ML1A8K2U0 1454 aa11.61□□□□□ -0.55
CBWD1-219ENST00000611457 MTUS2Q5JR59 1369 aa11.6□□□□□ -0.55
CBWD1-219ENST00000611457 E9PCH4 1651 aa11.6□□□□□ -0.55
CBWD1-219ENST00000611457 LAMC1P11047 1609 aa11.59□□□□□ -0.55
CBWD1-219ENST00000611457 SETD1AO15047 1707 aaKnown RBP11.59□□□□□ -0.55
CBWD1-219ENST00000611457 ADGRB3O60242 1522 aa11.57□□□□□ -0.56
CBWD1-219ENST00000611457 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
CBWD1-219ENST00000611457 LTBP4Q8N2S1 1624 aa11.56□□□□□ -0.56
CBWD1-219ENST00000611457 NOS1P29475 1434 aa11.56□□□□□ -0.56
CBWD1-219ENST00000611457 NCOA1Q15788 1441 aa11.56□□□□□ -0.56
CBWD1-219ENST00000611457 KNDC1Q76NI1 1749 aa11.56□□□□□ -0.56
CBWD1-219ENST00000611457 TMEM131LA2VDJ0 1609 aa11.55□□□□□ -0.56
CBWD1-219ENST00000611457 IQGAP1P46940 1657 aa11.55□□□□□ -0.56
CBWD1-219ENST00000611457 ERVK-7P63135 1459 aa11.55□□□□□ -0.56
CBWD1-219ENST00000611457 TRPM2O94759 1503 aa11.53□□□□□ -0.56
CBWD1-219ENST00000611457 XIRP1Q702N8 1843 aaKnown RBP11.52□□□□□ -0.57
CBWD1-219ENST00000611457 CPS1P31327 1500 aa11.52□□□□□ -0.57
CBWD1-219ENST00000611457 SETBP1Q9Y6X0 1596 aa11.49□□□□□ -0.57
CBWD1-219ENST00000611457 PPLO60437 1756 aa11.49□□□□□ -0.57
CBWD1-219ENST00000611457 ALKQ9UM73 1620 aa11.49□□□□□ -0.57
CBWD1-219ENST00000611457 CHD2O14647 1828 aaKnown RBP11.49□□□□□ -0.57
CBWD1-219ENST00000611457 XRN1Q8IZH2 1706 aaKnown RBP11.48□□□□□ -0.57
CBWD1-219ENST00000611457 KIAA1210Q9ULL0 1709 aa11.48□□□□□ -0.57
CBWD1-219ENST00000611457 KIF1BO60333 1816 aa11.47□□□□□ -0.57
CBWD1-219ENST00000611457 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
CBWD1-219ENST00000611457 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.57
CBWD1-219ENST00000611457 HFM1A2PYH4 1435 aa11.46□□□□□ -0.57
CBWD1-219ENST00000611457 MYO5BQ9ULV0 1848 aa11.45□□□□□ -0.58
CBWD1-219ENST00000611457 UHRF1BP1Q6BDS2 1440 aa11.45□□□□□ -0.58
CBWD1-219ENST00000611457 AEBP2Q6ZN18 517 aaPredicted RBP11.45□□□□□ -0.58
CBWD1-219ENST00000611457 STRCP1A6NGW2 1772 aa11.45□□□□□ -0.58
CBWD1-219ENST00000611457 SPAG9O60271 1321 aaKnown RBP11.44□□□□□ -0.58
CBWD1-219ENST00000611457 NCOA3Q9Y6Q9 1424 aa11.44□□□□□ -0.58
CBWD1-219ENST00000611457 ANKRD30AQ9BXX3 1397 aa11.43□□□□□ -0.58
CBWD1-219ENST00000611457 ZFYVE9O95405 1425 aa11.42□□□□□ -0.58
CBWD1-219ENST00000611457 CFDP1Q9UEE9 299 aaPredicted RBP11.42□□□□□ -0.58
CBWD1-219ENST00000611457 RAPGEF3O95398 923 aa11.41□□□□□ -0.58
CBWD1-219ENST00000611457 KCNH8Q96L42 1107 aa11.4□□□□□ -0.58
CBWD1-219ENST00000611457 NKTRP30414 1462 aaKnown RBP11.39□□□□□ -0.59
CBWD1-219ENST00000611457 NRXN1Q9ULB1 1477 aa11.39□□□□□ -0.59
CBWD1-219ENST00000611457 ZMYM3Q14202 1370 aa11.39□□□□□ -0.59
CBWD1-219ENST00000611457 HRCP23327 699 aa11.39□□□□□ -0.59
CBWD1-219ENST00000611457 CLTCL1P53675 1640 aa11.38□□□□□ -0.59
CBWD1-219ENST00000611457 KIF15Q9NS87 1388 aa11.37□□□□□ -0.59
CBWD1-219ENST00000611457 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
CBWD1-219ENST00000611457 NAIPQ13075 1403 aa11.35□□□□□ -0.59
CBWD1-219ENST00000611457 KANK4Q5T7N3 995 aaPredicted RBP11.34□□□□□ -0.59
CBWD1-219ENST00000611457 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
CBWD1-219ENST00000611457 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
CBWD1-219ENST00000611457 ANKRD50Q9ULJ7 1429 aa11.33□□□□□ -0.6
CBWD1-219ENST00000611457 PKD2Q13563 968 aa11.32□□□□□ -0.6
CBWD1-219ENST00000611457 AFAP1Q8N556 730 aa11.32□□□□□ -0.6
CBWD1-219ENST00000611457 MYOM2P54296 1465 aa11.32□□□□□ -0.6
CBWD1-219ENST00000611457 TNRQ92752 1358 aa11.32□□□□□ -0.6
CBWD1-219ENST00000611457 USP54Q70EL1 1684 aa11.3□□□□□ -0.6
CBWD1-219ENST00000611457 NHSL1Q5SYE7 1610 aa11.29□□□□□ -0.6
CBWD1-219ENST00000611457 SCAF11Q99590 1463 aaKnown RBP11.29□□□□□ -0.6
CBWD1-219ENST00000611457 DLC1Q96QB1 1528 aa11.28□□□□□ -0.6
CBWD1-219ENST00000611457 KANK1Q14678 1352 aa11.27□□□□□ -0.61
CBWD1-219ENST00000611457 COL22A1Q8NFW1 1626 aaPredicted RBP11.27□□□□□ -0.61
CBWD1-219ENST00000611457 SHPRHQ149N8 1683 aa11.27□□□□□ -0.61
CBWD1-219ENST00000611457 DCCP43146 1447 aa11.26□□□□□ -0.61
CBWD1-219ENST00000611457 DMRT2Q9Y5R5 561 aa11.26□□□□□ -0.61
CBWD1-219ENST00000611457 HNRNPMP52272 730 aaKnown RBP eCLIP11.26□□□□□ -0.61
CBWD1-219ENST00000611457 AHDC1Q5TGY3 1603 aaPredicted RBP11.26□□□□□ -0.61
CBWD1-219ENST00000611457 ZNF644Q9H582 1327 aaPredicted RBP11.25□□□□□ -0.61
CBWD1-219ENST00000611457 PLEKHG1Q9ULL1 1385 aa11.25□□□□□ -0.61
CBWD1-219ENST00000611457 TECPR2O15040 1411 aa11.24□□□□□ -0.61
CBWD1-219ENST00000611457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
CBWD1-219ENST00000611457 TSPY4P0CV99 314 aa11.22□□□□□ -0.61
CBWD1-219ENST00000611457 TSPY10P0CW01 314 aa11.22□□□□□ -0.61
CBWD1-219ENST00000611457 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
CBWD1-219ENST00000611457 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
CBWD1-219ENST00000611457 NPHP4O75161 1426 aaPredicted RBP11.22□□□□□ -0.61
CBWD1-219ENST00000611457 CDC42BPGQ6DT37 1551 aa11.22□□□□□ -0.61
CBWD1-219ENST00000611457 TOPAZ1Q8N9V7 1692 aa11.21□□□□□ -0.61
CBWD1-219ENST00000611457 PTCH1Q13635 1447 aa11.21□□□□□ -0.61
CBWD1-219ENST00000611457 SPATA31E1Q6ZUB1 1445 aa11.21□□□□□ -0.62
CBWD1-219ENST00000611457 NALCNQ8IZF0 1738 aa11.21□□□□□ -0.62
CBWD1-219ENST00000611457 TMEM2Q9UHN6 1383 aa11.2□□□□□ -0.62
CBWD1-219ENST00000611457 MARF1Q9Y4F3 1742 aaKnown RBP11.2□□□□□ -0.62
CBWD1-219ENST00000611457 FMN2Q9NZ56 1722 aa11.19□□□□□ -0.62
CBWD1-219ENST00000611457 CRYBG1Q9Y4K1 1723 aa11.19□□□□□ -0.62
CBWD1-219ENST00000611457 SLC52A1Q9NWF4 448 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms