RNA–Protein interactions for RNA: ENST00000611390.1

CDK13-206, Transcript of cyclin dependent kinase 13, humanhuman

TSL 5 BASIC

Gene CDK13, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-206ENST00000611390 USP47Q96K76 1375 aa16.7■□□□□ 0.26
CDK13-206ENST00000611390 ATP10AO60312 1499 aa16.69■□□□□ 0.26
CDK13-206ENST00000611390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■□□□□ 10.5
CDK13-206ENST00000611390 KDM5CP41229 1560 aa16.69■□□□□ 0.26
CDK13-206ENST00000611390 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
CDK13-206ENST00000611390 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
CDK13-206ENST00000611390 AFAP1Q8N556 730 aa16.67■□□□□ 0.26
CDK13-206ENST00000611390 KIF7Q2M1P5 1343 aa16.67■□□□□ 0.26
CDK13-206ENST00000611390 ADGRL1O94910 1474 aa16.66■□□□□ 0.26
CDK13-206ENST00000611390 ATP7AQ04656 1500 aa16.66■□□□□ 0.26
CDK13-206ENST00000611390 SCAPERQ9BY12 1400 aa16.64■□□□□ 0.25
CDK13-206ENST00000611390 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDK13-206ENST00000611390 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
CDK13-206ENST00000611390 DEPDC5O75140 1603 aa16.64■□□□□ 0.25
CDK13-206ENST00000611390 ARID4BQ4LE39 1312 aaPredicted RBP16.63■□□□□ 0.25
CDK13-206ENST00000611390 PRAG1Q86YV5 1406 aa16.62■□□□□ 0.25
CDK13-206ENST00000611390 A2MP01023 1474 aa16.61■□□□□ 0.25
CDK13-206ENST00000611390 CARD11Q9BXL7 1154 aa16.61■□□□□ 0.25
CDK13-206ENST00000611390 KDM2AQ9Y2K7 1162 aa16.61■□□□□ 0.25
CDK13-206ENST00000611390 BCORL1Q5H9F3 1711 aa16.61■□□□□ 0.25
CDK13-206ENST00000611390 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
CDK13-206ENST00000611390 TRPM1Q7Z4N2 1603 aa16.59■□□□□ 0.25
CDK13-206ENST00000611390 VWDEQ8N2E2 1590 aa16.59■□□□□ 0.25
CDK13-206ENST00000611390 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
CDK13-206ENST00000611390 DHX29Q7Z478 1369 aaKnown RBP16.58■□□□□ 0.24
CDK13-206ENST00000611390 E9PCH4 1651 aa16.58■□□□□ 0.24
CDK13-206ENST00000611390 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
CDK13-206ENST00000611390 ZNF518AQ6AHZ1 1483 aa16.57■□□□□ 0.24
CDK13-206ENST00000611390 TRPM2O94759 1503 aa16.57■□□□□ 0.24
CDK13-206ENST00000611390 TET3O43151 1660 aa16.57■□□□□ 0.24
CDK13-206ENST00000611390 PRKRIP1Q9H875 184 aaPredicted RBP16.57■□□□□ 0.24
CDK13-206ENST00000611390 GPRASP1Q5JY77 1395 aa16.56■□□□□ 0.24
CDK13-206ENST00000611390 CD109Q6YHK3 1445 aa16.56■□□□□ 0.24
CDK13-206ENST00000611390 PRDM15P57071 1507 aaPredicted RBP16.56■□□□□ 0.24
CDK13-206ENST00000611390 KANK1Q14678 1352 aa16.56■□□□□ 0.24
CDK13-206ENST00000611390 PTPRTO14522 1441 aa16.56■□□□□ 0.24
CDK13-206ENST00000611390 LAMC1P11047 1609 aa16.55■□□□□ 0.24
CDK13-206ENST00000611390 RGL3Q3MIN7 710 aa16.55■□□□□ 0.24
CDK13-206ENST00000611390 KIDINS220Q9ULH0 1771 aa16.54■□□□□ 0.24
CDK13-206ENST00000611390 MROH1Q8NDA8 1641 aa16.53■□□□□ 0.24
CDK13-206ENST00000611390 POGZQ7Z3K3 1410 aa16.52■□□□□ 0.24
CDK13-206ENST00000611390 SPHKAPQ2M3C7 1700 aa16.52■□□□□ 0.24
CDK13-206ENST00000611390 ST20-MTHFSA0A0A6YYL1 179 aa16.51■□□□□ 0.23
CDK13-206ENST00000611390 KIF3BO15066 747 aa16.51■□□□□ 0.23
CDK13-206ENST00000611390 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
CDK13-206ENST00000611390 MLH3Q9UHC1 1453 aa16.49■□□□□ 0.23
CDK13-206ENST00000611390 CEP152O94986 1710 aa16.49■□□□□ 0.23
CDK13-206ENST00000611390 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
CDK13-206ENST00000611390 NEO1Q92859 1461 aa16.48■□□□□ 0.23
CDK13-206ENST00000611390 STAC3Q96MF2 364 aa16.47■□□□□ 0.23
CDK13-206ENST00000611390 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
CDK13-206ENST00000611390 NEURL4Q96JN8 1562 aa16.47■□□□□ 0.23
CDK13-206ENST00000611390 LMTK2Q8IWU2 1503 aa16.47■□□□□ 0.23
CDK13-206ENST00000611390 NBPF1Q3BBV0 1214 aa16.47■□□□□ 0.23
CDK13-206ENST00000611390 POLR3GLQ9BT43 218 aa16.46■□□□□ 0.23
CDK13-206ENST00000611390 HECW2Q9P2P5 1572 aa16.46■□□□□ 0.23
CDK13-206ENST00000611390 EFCAB6Q5THR3 1501 aa16.46■□□□□ 0.23
CDK13-206ENST00000611390 SUPT16HQ9Y5B9 1047 aaKnown RBP16.46■□□□□ 0.23
CDK13-206ENST00000611390 CCDC184Q52MB2 194 aa16.45■□□□□ 0.22
CDK13-206ENST00000611390 MADDQ8WXG6 1647 aa16.45■□□□□ 0.22
CDK13-206ENST00000611390 MRS2Q9HD23 443 aa16.44■□□□□ 0.22
CDK13-206ENST00000611390 FRMPD1Q5SYB0 1578 aa16.44■□□□□ 0.22
CDK13-206ENST00000611390 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDK13-206ENST00000611390 COL17A1Q9UMD9 1497 aaPredicted RBP16.43■□□□□ 0.22
CDK13-206ENST00000611390 PPRC1Q5VV67 1664 aaKnown RBP16.41■□□□□ 0.22
CDK13-206ENST00000611390 ABCA6Q8N139 1617 aa16.4■□□□□ 0.22
CDK13-206ENST00000611390 MAP3K4Q9Y6R4 1608 aa16.4■□□□□ 0.22
CDK13-206ENST00000611390 TESK2Q96S53 571 aa16.39■□□□□ 0.22
CDK13-206ENST00000611390 GLI2P10070 1586 aa16.39■□□□□ 0.21
CDK13-206ENST00000611390 KTN1Q86UP2 1357 aaKnown RBP16.39■□□□□ 0.21
CDK13-206ENST00000611390 MYOM2P54296 1465 aa16.37■□□□□ 0.21
CDK13-206ENST00000611390 IQGAP1P46940 1657 aa16.37■□□□□ 0.21
CDK13-206ENST00000611390 UGGT1Q9NYU2 1555 aa16.36■□□□□ 0.21
CDK13-206ENST00000611390 FAM9BQ8IZU0 186 aa16.35■□□□□ 0.21
CDK13-206ENST00000611390 KIAA1210Q9ULL0 1709 aa16.35■□□□□ 0.21
CDK13-206ENST00000611390 RIMBP3CA6NJZ7 1639 aa16.35■□□□□ 0.21
CDK13-206ENST00000611390 RIMBP3BA6NNM3 1639 aa16.35■□□□□ 0.21
CDK13-206ENST00000611390 RIMBP3Q9UFD9 1639 aa16.35■□□□□ 0.21
CDK13-206ENST00000611390 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
CDK13-206ENST00000611390 DIP2CQ9Y2E4 1556 aa16.35■□□□□ 0.21
CDK13-206ENST00000611390 SCAF11Q99590 1463 aaKnown RBP16.34■□□□□ 0.21
CDK13-206ENST00000611390 RICTORQ6R327 1708 aa16.34■□□□□ 0.21
CDK13-206ENST00000611390 KIF1BO60333 1816 aa16.34■□□□□ 0.21
CDK13-206ENST00000611390 TMF1P82094 1093 aa16.34■□□□□ 0.21
CDK13-206ENST00000611390 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
CDK13-206ENST00000611390 NPATQ14207 1427 aa16.34■□□□□ 0.21
CDK13-206ENST00000611390 ABCC3O15438 1527 aa16.33■□□□□ 0.21
CDK13-206ENST00000611390 RAPGEF3O95398 923 aa16.33■□□□□ 0.2
CDK13-206ENST00000611390 RALBP1Q15311 655 aa16.33■□□□□ 0.2
CDK13-206ENST00000611390 ADGRB3O60242 1522 aa16.32■□□□□ 0.2
CDK13-206ENST00000611390 ZBED9Q6R2W3 1325 aa16.32■□□□□ 0.2
CDK13-206ENST00000611390 IFT172Q9UG01 1749 aa16.31■□□□□ 0.2
CDK13-206ENST00000611390 NEFLP07196 543 aa16.31■□□□□ 0.2
CDK13-206ENST00000611390 MYBBP1AQ9BQG0 1328 aaKnown RBP16.31■□□□□ 0.2
CDK13-206ENST00000611390 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
CDK13-206ENST00000611390 GGT6Q6P531 493 aa16.3■□□□□ 0.2
CDK13-206ENST00000611390 PELP1Q8IZL8 1130 aaKnown RBP16.3■□□□□ 0.2
CDK13-206ENST00000611390 NRXN1Q9ULB1 1477 aa16.3■□□□□ 0.2
CDK13-206ENST00000611390 BRD4O60885 1362 aaPredicted RBP16.3■□□□□ 0.2
CDK13-206ENST00000611390 FKBP8Q14318 412 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms