RNA–Protein interactions for RNA: ENST00000611360.4

SEM1-213, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 1 (best)

Gene SEM1, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-213ENST00000611360 ARAP3Q8WWN8 1544 aa9.6□□□□□ -0.87
SEM1-213ENST00000611360 CDC42BPBQ9Y5S2 1711 aa9.59□□□□□ -0.87
SEM1-213ENST00000611360 GLI2P10070 1586 aa9.59□□□□□ -0.87
SEM1-213ENST00000611360 FKBP8Q14318 412 aa9.59□□□□□ -0.87
SEM1-213ENST00000611360 KIF15Q9NS87 1388 aa9.59□□□□□ -0.87
SEM1-213ENST00000611360 ASXL2Q76L83 1435 aa9.58□□□□□ -0.88
SEM1-213ENST00000611360 PLXNC1O60486 1568 aa9.58□□□□□ -0.88
SEM1-213ENST00000611360 PLCH2O75038 1416 aa9.57□□□□□ -0.88
SEM1-213ENST00000611360 SYCP2Q9BX26 1530 aa9.57□□□□□ -0.88
SEM1-213ENST00000611360 TEX14Q8IWB6 1497 aa9.57□□□□□ -0.88
SEM1-213ENST00000611360 SPDYE4A6NLX3 237 aa9.56□□□□□ -0.88
SEM1-213ENST00000611360 WDR7Q9Y4E6 1490 aa9.55□□□□□ -0.88
SEM1-213ENST00000611360 ABCC1P33527 1531 aa9.55□□□□□ -0.88
SEM1-213ENST00000611360 HNRNPMP52272 730 aaKnown RBP eCLIP9.54□□□□□ -0.88
SEM1-213ENST00000611360 EFCAB2Q5VUJ9 269 aa9.54□□□□□ -0.88
SEM1-213ENST00000611360 NUP155O75694 1391 aa9.53□□□□□ -0.88
SEM1-213ENST00000611360 ERBINQ96RT1 1412 aa9.53□□□□□ -0.88
SEM1-213ENST00000611360 UNC13BO14795 1591 aa9.53□□□□□ -0.88
SEM1-213ENST00000611360 DUOX2Q9NRD8 1548 aa9.52□□□□□ -0.88
SEM1-213ENST00000611360 PPRC1Q5VV67 1664 aaKnown RBP9.52□□□□□ -0.89
SEM1-213ENST00000611360 ZNF692Q9BU19 519 aaPredicted RBP9.52□□□□□ -0.89
SEM1-213ENST00000611360 ARHGEF12Q9NZN5 1544 aa9.51□□□□□ -0.89
SEM1-213ENST00000611360 RTEL1-TNFRSF6BF6WH68 1400 aa9.51□□□□□ -0.89
SEM1-213ENST00000611360 PKD2Q13563 968 aa9.51□□□□□ -0.89
SEM1-213ENST00000611360 L3MBTL2Q969R5 705 aa9.51□□□□□ -0.89
SEM1-213ENST00000611360 ABCA9Q8IUA7 1624 aa9.51□□□□□ -0.89
SEM1-213ENST00000611360 MAP3K4Q9Y6R4 1608 aa9.51□□□□□ -0.89
SEM1-213ENST00000611360 FAM135AQ9P2D6 1515 aa9.51□□□□□ -0.89
SEM1-213ENST00000611360 MAGI2Q86UL8 1455 aa9.5□□□□□ -0.89
SEM1-213ENST00000611360 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
SEM1-213ENST00000611360 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
SEM1-213ENST00000611360 EIF4G2P78344 907 aaKnown RBP eCLIP9.49□□□□□ -0.89
SEM1-213ENST00000611360 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
SEM1-213ENST00000611360 KCNH8Q96L42 1107 aa9.49□□□□□ -0.89
SEM1-213ENST00000611360 IQGAP3Q86VI3 1631 aa9.48□□□□□ -0.89
SEM1-213ENST00000611360 FANCAO15360 1455 aa9.47□□□□□ -0.89
SEM1-213ENST00000611360 ZFYVE16Q7Z3T8 1539 aa9.47□□□□□ -0.89
SEM1-213ENST00000611360 UHRF1BP1Q6BDS2 1440 aa9.47□□□□□ -0.89
SEM1-213ENST00000611360 TSPOAP1O95153 1857 aa9.47□□□□□ -0.89
SEM1-213ENST00000611360 COL17A1Q9UMD9 1497 aaPredicted RBP9.47□□□□□ -0.89
SEM1-213ENST00000611360 DDX10Q13206 875 aaKnown RBP9.46□□□□□ -0.9
SEM1-213ENST00000611360 YTHDC1Q96MU7 727 aaKnown RBP9.46□□□□□ -0.9
SEM1-213ENST00000611360 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.9
SEM1-213ENST00000611360 SSUH2Q9Y2M2 353 aa9.46□□□□□ -0.9
SEM1-213ENST00000611360 TRAPPC8Q9Y2L5 1435 aa9.46□□□□□ -0.9
SEM1-213ENST00000611360 CFAP74Q9C0B2 1584 aa9.46□□□□□ -0.9
SEM1-213ENST00000611360 ANP32CO43423 234 aa9.45□□□□□ -0.9
SEM1-213ENST00000611360 HSPA5P11021 654 aaKnown RBP9.45□□□□□ -0.9
SEM1-213ENST00000611360 ATP10AO60312 1499 aa9.45□□□□□ -0.9
SEM1-213ENST00000611360 INO80Q9ULG1 1556 aaPredicted RBP9.45□□□□□ -0.9
SEM1-213ENST00000611360 CCER2I3L3R5 266 aa9.44□□□□□ -0.9
SEM1-213ENST00000611360 SPAG9O60271 1321 aaKnown RBP9.44□□□□□ -0.9
SEM1-213ENST00000611360 CCDC144AA2RUR9 1427 aa9.44□□□□□ -0.9
SEM1-213ENST00000611360 CD109Q6YHK3 1445 aa9.44□□□□□ -0.9
SEM1-213ENST00000611360 RALGAPBQ86X10 1494 aa9.44□□□□□ -0.9
SEM1-213ENST00000611360 ATP7AQ04656 1500 aa9.43□□□□□ -0.9
SEM1-213ENST00000611360 ADGRL1O94910 1474 aa9.43□□□□□ -0.9
SEM1-213ENST00000611360 SPATA31E1Q6ZUB1 1445 aa9.43□□□□□ -0.9
SEM1-213ENST00000611360 NBPF8Q3BBV2 869 aa9.43□□□□□ -0.9
SEM1-213ENST00000611360 EIF2AK4Q9P2K8 1649 aaKnown RBP9.42□□□□□ -0.9
SEM1-213ENST00000611360 HIRIP3Q9BW71 556 aaPredicted RBP9.42□□□□□ -0.9
SEM1-213ENST00000611360 ZNF518AQ6AHZ1 1483 aa9.41□□□□□ -0.9
SEM1-213ENST00000611360 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
SEM1-213ENST00000611360 DEPDC5O75140 1603 aa9.41□□□□□ -0.9
SEM1-213ENST00000611360 SCAPERQ9BY12 1400 aa9.4□□□□□ -0.9
SEM1-213ENST00000611360 CCDC7Q96M83 1385 aa9.4□□□□□ -0.9
SEM1-213ENST00000611360 ARID4BQ4LE39 1312 aaPredicted RBP9.4□□□□□ -0.9
SEM1-213ENST00000611360 WASHC2AQ641Q2 1341 aa9.4□□□□□ -0.9
SEM1-213ENST00000611360 KDM4FA0A1W2PPD8 638 aa9.4□□□□□ -0.9
SEM1-213ENST00000611360 AKT1S1Q96B36 256 aa9.4□□□□□ -0.9
SEM1-213ENST00000611360 POLR1AO95602 1720 aaPredicted RBP9.39□□□□□ -0.91
SEM1-213ENST00000611360 KANK1Q14678 1352 aa9.39□□□□□ -0.91
SEM1-213ENST00000611360 USP47Q96K76 1375 aa9.39□□□□□ -0.91
SEM1-213ENST00000611360 KDM5CP41229 1560 aa9.39□□□□□ -0.91
SEM1-213ENST00000611360 PRDM15P57071 1507 aaPredicted RBP9.38□□□□□ -0.91
SEM1-213ENST00000611360 PLA2R1Q13018 1463 aa9.38□□□□□ -0.91
SEM1-213ENST00000611360 VWDEQ8N2E2 1590 aa9.37□□□□□ -0.91
SEM1-213ENST00000611360 TRPM2O94759 1503 aa9.37□□□□□ -0.91
SEM1-213ENST00000611360 TET3O43151 1660 aa9.37□□□□□ -0.91
SEM1-213ENST00000611360 NEO1Q92859 1461 aa9.37□□□□□ -0.91
SEM1-213ENST00000611360 REM2Q8IYK8 340 aaPredicted RBP9.37□□□□□ -0.91
SEM1-213ENST00000611360 AFAP1Q8N556 730 aa9.37□□□□□ -0.91
SEM1-213ENST00000611360 GTF3C3Q9Y5Q9 886 aa9.37□□□□□ -0.91
SEM1-213ENST00000611360 POGZQ7Z3K3 1410 aa9.37□□□□□ -0.91
SEM1-213ENST00000611360 PRAG1Q86YV5 1406 aa9.37□□□□□ -0.91
SEM1-213ENST00000611360 ROCK2O75116 1388 aaKnown RBP9.37□□□□□ -0.91
SEM1-213ENST00000611360 DHX29Q7Z478 1369 aaKnown RBP9.37□□□□□ -0.91
SEM1-213ENST00000611360 LAMC1P11047 1609 aa9.36□□□□□ -0.91
SEM1-213ENST00000611360 NEURL4Q96JN8 1562 aa9.36□□□□□ -0.91
SEM1-213ENST00000611360 MLH3Q9UHC1 1453 aa9.35□□□□□ -0.91
SEM1-213ENST00000611360 PTPRTO14522 1441 aa9.35□□□□□ -0.91
SEM1-213ENST00000611360 ZNF326Q5BKZ1 582 aaKnown RBP9.35□□□□□ -0.91
SEM1-213ENST00000611360 PROM2Q8N271 834 aa9.35□□□□□ -0.91
SEM1-213ENST00000611360 STAC3Q96MF2 364 aa9.35□□□□□ -0.91
SEM1-213ENST00000611360 GPRASP1Q5JY77 1395 aa9.35□□□□□ -0.91
SEM1-213ENST00000611360 A2MP01023 1474 aa9.34□□□□□ -0.91
SEM1-213ENST00000611360 KIF7Q2M1P5 1343 aa9.34□□□□□ -0.91
SEM1-213ENST00000611360 HECW2Q9P2P5 1572 aa9.34□□□□□ -0.91
SEM1-213ENST00000611360 DCAF11Q8TEB1 546 aa9.34□□□□□ -0.91
SEM1-213ENST00000611360 CARD11Q9BXL7 1154 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms