RNA–Protein interactions for RNA: ENST00000611331.1

LINC01949-202, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 2

Gene LINC01949, Length 1,618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-202ENST00000611331 CDK13Q14004 1512 aaKnown RBP12.63□□□□□ -0.39
LINC01949-202ENST00000611331 SETD1AO15047 1707 aaKnown RBP12.63□□□□□ -0.39
LINC01949-202ENST00000611331 POLR1AO95602 1720 aaPredicted RBP12.61□□□□□ -0.39
LINC01949-202ENST00000611331 DSG3P32926 999 aa12.61□□□□□ -0.39
LINC01949-202ENST00000611331 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
LINC01949-202ENST00000611331 CLTCQ00610 1675 aaKnown RBP12.6□□□□□ -0.39
LINC01949-202ENST00000611331 NEURL4Q96JN8 1562 aa12.59□□□□□ -0.39
LINC01949-202ENST00000611331 VWDEQ8N2E2 1590 aa12.58□□□□□ -0.4
LINC01949-202ENST00000611331 DNMT1P26358 1616 aaKnown RBP12.58□□□□□ -0.4
LINC01949-202ENST00000611331 A2ML1A8K2U0 1454 aa12.57□□□□□ -0.4
LINC01949-202ENST00000611331 KIF14Q15058 1648 aa12.57□□□□□ -0.4
LINC01949-202ENST00000611331 RNF17Q9BXT8 1623 aaKnown RBP12.57□□□□□ -0.4
LINC01949-202ENST00000611331 KIDINS220Q9ULH0 1771 aa12.57□□□□□ -0.4
LINC01949-202ENST00000611331 ITSN2Q9NZM3 1697 aa12.54□□□□□ -0.4
LINC01949-202ENST00000611331 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC01949-202ENST00000611331 ABCC1P33527 1531 aa12.53□□□□□ -0.4
LINC01949-202ENST00000611331 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.4
LINC01949-202ENST00000611331 LRRC7Q96NW7 1537 aa12.52□□□□□ -0.41
LINC01949-202ENST00000611331 CDC42BPBQ9Y5S2 1711 aa12.52□□□□□ -0.41
LINC01949-202ENST00000611331 ABCB7O75027 752 aa12.51□□□□□ -0.41
LINC01949-202ENST00000611331 POLA2Q14181 598 aa12.51□□□□□ -0.41
LINC01949-202ENST00000611331 ANKLE2Q86XL3 938 aa12.51□□□□□ -0.41
LINC01949-202ENST00000611331 SYNMO15061 1565 aa12.51□□□□□ -0.41
LINC01949-202ENST00000611331 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
LINC01949-202ENST00000611331 NPHP4O75161 1426 aaPredicted RBP12.5□□□□□ -0.41
LINC01949-202ENST00000611331 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
LINC01949-202ENST00000611331 CLIP1P30622 1438 aa12.48□□□□□ -0.41
LINC01949-202ENST00000611331 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
LINC01949-202ENST00000611331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01949-202ENST00000611331 GGT6Q6P531 493 aa12.48□□□□□ -0.41
LINC01949-202ENST00000611331 MED14O60244 1454 aa12.47□□□□□ -0.41
LINC01949-202ENST00000611331 PREX2Q70Z35 1606 aa12.47□□□□□ -0.41
LINC01949-202ENST00000611331 SAMD9LQ8IVG5 1584 aa12.47□□□□□ -0.41
LINC01949-202ENST00000611331 DEPDC5O75140 1603 aa12.47□□□□□ -0.41
LINC01949-202ENST00000611331 IQGAP1P46940 1657 aa12.46□□□□□ -0.41
LINC01949-202ENST00000611331 PLXNC1O60486 1568 aa12.45□□□□□ -0.42
LINC01949-202ENST00000611331 TNRQ92752 1358 aa12.45□□□□□ -0.42
LINC01949-202ENST00000611331 SPAG9O60271 1321 aaKnown RBP12.44□□□□□ -0.42
LINC01949-202ENST00000611331 THEMISQ8N1K5 641 aaPredicted RBP12.44□□□□□ -0.42
LINC01949-202ENST00000611331 A2MP01023 1474 aa12.43□□□□□ -0.42
LINC01949-202ENST00000611331 FAM135BQ49AJ0 1406 aa12.43□□□□□ -0.42
LINC01949-202ENST00000611331 SRCAPQ6ZRS2 3230 aa12.42□□□□□ -0.42
LINC01949-202ENST00000611331 TRIM52Q96A61 297 aa12.42□□□□□ -0.42
LINC01949-202ENST00000611331 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
LINC01949-202ENST00000611331 FAM135AQ9P2D6 1515 aa12.41□□□□□ -0.42
LINC01949-202ENST00000611331 FBXO31Q5XUX0 539 aaPredicted RBP12.4□□□□□ -0.42
LINC01949-202ENST00000611331 UGGT1Q9NYU2 1555 aa12.4□□□□□ -0.42
LINC01949-202ENST00000611331 FMN1Q68DA7 1419 aa12.39□□□□□ -0.43
LINC01949-202ENST00000611331 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
LINC01949-202ENST00000611331 SYCP2Q9BX26 1530 aa12.39□□□□□ -0.43
LINC01949-202ENST00000611331 INO80Q9ULG1 1556 aaPredicted RBP12.38□□□□□ -0.43
LINC01949-202ENST00000611331 NLRP1Q9C000 1473 aa12.38□□□□□ -0.43
LINC01949-202ENST00000611331 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
LINC01949-202ENST00000611331 ZNF777Q9ULD5 760 aaPredicted RBP12.37□□□□□ -0.43
LINC01949-202ENST00000611331 XIRP1Q702N8 1843 aaKnown RBP12.37□□□□□ -0.43
LINC01949-202ENST00000611331 PZPP20742 1482 aa12.37□□□□□ -0.43
LINC01949-202ENST00000611331 CDC42BPAQ5VT25 1732 aa12.37□□□□□ -0.43
LINC01949-202ENST00000611331 ADGBQ8N7X0 1667 aa12.35□□□□□ -0.43
LINC01949-202ENST00000611331 HNRNPMP52272 730 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC01949-202ENST00000611331 ZNF772Q68DY9 489 aaPredicted RBP12.35□□□□□ -0.43
LINC01949-202ENST00000611331 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
LINC01949-202ENST00000611331 ZC3H13Q5T200 1668 aaKnown RBP12.35□□□□□ -0.43
LINC01949-202ENST00000611331 JCADQ9P266 1359 aa12.34□□□□□ -0.43
LINC01949-202ENST00000611331 LRRIQ1Q96JM4 1722 aa12.34□□□□□ -0.43
LINC01949-202ENST00000611331 MEX3CQ5U5Q3 659 aaKnown RBP12.33□□□□□ -0.44
LINC01949-202ENST00000611331 KDM5DQ9BY66 1539 aa12.33□□□□□ -0.44
LINC01949-202ENST00000611331 RXRBP28702 533 aa12.32□□□□□ -0.44
LINC01949-202ENST00000611331 PHLPP1O60346 1717 aa12.32□□□□□ -0.44
LINC01949-202ENST00000611331 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
LINC01949-202ENST00000611331 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
LINC01949-202ENST00000611331 KIAA1107Q9UPP5 1409 aa12.29□□□□□ -0.44
LINC01949-202ENST00000611331 PLEKHH2Q8IVE3 1493 aa12.29□□□□□ -0.44
LINC01949-202ENST00000611331 LRP6O75581 1613 aa12.29□□□□□ -0.44
LINC01949-202ENST00000611331 WASHC2CQ9Y4E1 1318 aa12.28□□□□□ -0.44
LINC01949-202ENST00000611331 TMEM94Q12767 1356 aa12.28□□□□□ -0.44
LINC01949-202ENST00000611331 SCAF11Q99590 1463 aaKnown RBP12.28□□□□□ -0.44
LINC01949-202ENST00000611331 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.44
LINC01949-202ENST00000611331 SPATA31A6Q5VVP1 1343 aa12.27□□□□□ -0.45
LINC01949-202ENST00000611331 KIF3BO15066 747 aa12.26□□□□□ -0.45
LINC01949-202ENST00000611331 GPATCH8Q9UKJ3 1502 aaKnown RBP12.25□□□□□ -0.45
LINC01949-202ENST00000611331 DHX29Q7Z478 1369 aaKnown RBP12.25□□□□□ -0.45
LINC01949-202ENST00000611331 CCDC18Q5T9S5 1454 aa12.25□□□□□ -0.45
LINC01949-202ENST00000611331 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
LINC01949-202ENST00000611331 MAP3K1Q13233 1512 aa12.24□□□□□ -0.45
LINC01949-202ENST00000611331 COL16A1Q07092 1604 aaPredicted RBP12.24□□□□□ -0.45
LINC01949-202ENST00000611331 SETBP1Q9Y6X0 1596 aa12.23□□□□□ -0.45
LINC01949-202ENST00000611331 EEA1Q15075 1411 aa12.23□□□□□ -0.45
LINC01949-202ENST00000611331 TXNDC2Q86VQ3 553 aa12.22□□□□□ -0.45
LINC01949-202ENST00000611331 CFDP1Q9UEE9 299 aaPredicted RBP12.22□□□□□ -0.45
LINC01949-202ENST00000611331 FGD6Q6ZV73 1430 aa12.22□□□□□ -0.45
LINC01949-202ENST00000611331 UBR1Q8IWV7 1749 aa12.22□□□□□ -0.45
LINC01949-202ENST00000611331 LTKP29376 864 aa12.22□□□□□ -0.45
LINC01949-202ENST00000611331 PROSER2Q86WR7 435 aaPredicted RBP12.22□□□□□ -0.45
LINC01949-202ENST00000611331 NUTM2BA6NNL0 878 aaPredicted RBP12.21□□□□□ -0.46
LINC01949-202ENST00000611331 NUTM2EB1AL46 878 aaPredicted RBP12.21□□□□□ -0.46
LINC01949-202ENST00000611331 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.46
LINC01949-202ENST00000611331 NUTM2AQ8IVF1 878 aaPredicted RBP12.21□□□□□ -0.46
LINC01949-202ENST00000611331 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.46
LINC01949-202ENST00000611331 SLAIN2Q9P270 581 aa12.21□□□□□ -0.46
LINC01949-202ENST00000611331 RGS12O14924 1447 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms