RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
CDK11B-205ENST00000611150 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
CDK11B-205ENST00000611150 HSP90B1P14625 803 aaKnown RBP21.99■■□□□ 1.11
CDK11B-205ENST00000611150 MRS2Q9HD23 443 aa21.98■■□□□ 1.11
CDK11B-205ENST00000611150 CCDC184Q52MB2 194 aa21.97■■□□□ 1.11
CDK11B-205ENST00000611150 ARID3AQ99856 593 aa21.97■■□□□ 1.11
CDK11B-205ENST00000611150 DYNC1I1O14576 645 aa21.97■■□□□ 1.11
CDK11B-205ENST00000611150 CNPY4Q8N129 248 aa21.96■■□□□ 1.11
CDK11B-205ENST00000611150 GRIN2AQ12879 1464 aa21.95■■□□□ 1.11
CDK11B-205ENST00000611150 GRPEL1Q9HAV7 217 aa21.95■■□□□ 1.1
CDK11B-205ENST00000611150 FHAD1B1AJZ9 1412 aa21.95■■□□□ 1.1
CDK11B-205ENST00000611150 CLGNO14967 610 aa21.91■■□□□ 1.1
CDK11B-205ENST00000611150 SLC20A2Q08357 652 aa21.91■■□□□ 1.1
CDK11B-205ENST00000611150 EXOC6Q8TAG9 804 aa21.91■■□□□ 1.1
CDK11B-205ENST00000611150 UQCRHLA0A096LP55 91 aa21.91■■□□□ 1.1
CDK11B-205ENST00000611150 UQCRHP07919 91 aa21.91■■□□□ 1.1
CDK11B-205ENST00000611150 CYB5RLQ6IPT4 315 aa21.91■■□□□ 1.1
CDK11B-205ENST00000611150 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
CDK11B-205ENST00000611150 RRBP1Q9P2E9 1410 aaKnown RBP21.89■■□□□ 1.1
CDK11B-205ENST00000611150 MMP14P50281 582 aa21.89■■□□□ 1.1
CDK11B-205ENST00000611150 AMER1Q5JTC6 1135 aaPredicted RBP21.89■■□□□ 1.1
CDK11B-205ENST00000611150 ZSCAN30Q86W11 494 aa21.89■■□□□ 1.1
CDK11B-205ENST00000611150 R3HCC1Q9Y3T6 440 aaKnown RBP21.89■■□□□ 1.1
CDK11B-205ENST00000611150 RAB3GAP2Q9H2M9 1393 aa21.88■■□□□ 1.09
CDK11B-205ENST00000611150 C14orf37Q86TY3 774 aa21.88■■□□□ 1.09
CDK11B-205ENST00000611150 DNAJC2Q99543 621 aaKnown RBP21.88■■□□□ 1.09
CDK11B-205ENST00000611150 E9PSI1 815 aa21.88■■□□□ 1.09
CDK11B-205ENST00000611150 FAM161AQ3B820 660 aa21.88■■□□□ 1.09
CDK11B-205ENST00000611150 PLPPR3Q6T4P5 718 aa21.88■■□□□ 1.09
CDK11B-205ENST00000611150 MSNP26038 577 aaKnown RBP21.87■■□□□ 1.09
CDK11B-205ENST00000611150 GZF1Q9H116 711 aaPredicted RBP21.87■■□□□ 1.09
CDK11B-205ENST00000611150 NUP160Q12769 1436 aa21.86■■□□□ 1.09
CDK11B-205ENST00000611150 KCNG1Q9UIX4 513 aa21.86■■□□□ 1.09
CDK11B-205ENST00000611150 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
CDK11B-205ENST00000611150 CGNQ9P2M7 1197 aaKnown RBP21.85■■□□□ 1.09
CDK11B-205ENST00000611150 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
CDK11B-205ENST00000611150 RRP1P56182 461 aaKnown RBP21.85■■□□□ 1.09
CDK11B-205ENST00000611150 HDAC5Q9UQL6 1122 aa21.85■■□□□ 1.09
CDK11B-205ENST00000611150 BECN1Q14457 450 aa21.84■■□□□ 1.09
CDK11B-205ENST00000611150 WWC1Q8IX03 1113 aa21.84■■□□□ 1.09
CDK11B-205ENST00000611150 ZBTB22O15209 634 aa21.84■■□□□ 1.09
CDK11B-205ENST00000611150 PRKRIP1Q9H875 184 aaPredicted RBP21.84■■□□□ 1.09
CDK11B-205ENST00000611150 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.09
CDK11B-205ENST00000611150 MAPK8IP2Q13387 824 aaPredicted RBP21.81■■□□□ 1.08
CDK11B-205ENST00000611150 APPP05067 770 aa21.8■■□□□ 1.08
CDK11B-205ENST00000611150 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.8■■□□□ 1.08
CDK11B-205ENST00000611150 TMC1Q8TDI8 760 aa21.8■■□□□ 1.08
CDK11B-205ENST00000611150 IRX5P78411 483 aaPredicted RBP21.8■■□□□ 1.08
CDK11B-205ENST00000611150 IGF1RP08069 1367 aa21.79■■□□□ 1.08
CDK11B-205ENST00000611150 AXDND1Q5T1B0 1012 aaPredicted RBP21.79■■□□□ 1.08
CDK11B-205ENST00000611150 CNTLNQ9NXG0 1405 aa21.78■■□□□ 1.08
CDK11B-205ENST00000611150 PTMSP20962 102 aa21.77■■□□□ 1.08
CDK11B-205ENST00000611150 C8orf34Q49A92 452 aa21.77■■□□□ 1.08
CDK11B-205ENST00000611150 CCDC173Q0VFZ6 552 aa21.76■■□□□ 1.07
CDK11B-205ENST00000611150 SLKQ9H2G2 1235 aaPredicted RBP21.76■■□□□ 1.07
CDK11B-205ENST00000611150 MCM4P33991 863 aa21.76■■□□□ 1.07
CDK11B-205ENST00000611150 TRAK2O60296 914 aa21.75■■□□□ 1.07
CDK11B-205ENST00000611150 CUL7Q14999 1698 aa21.75■■□□□ 1.07
CDK11B-205ENST00000611150 CBX1P83916 185 aa21.74■■□□□ 1.07
CDK11B-205ENST00000611150 ZNF622Q969S3 477 aaKnown RBP eCLIP21.74■■□□□ 1.071e-6■■■□□ 18.5
CDK11B-205ENST00000611150 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
CDK11B-205ENST00000611150 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
CDK11B-205ENST00000611150 FAM193AP78312 1265 aa21.73■■□□□ 1.07
CDK11B-205ENST00000611150 ANTXR1Q9H6X2 564 aa21.73■■□□□ 1.07
CDK11B-205ENST00000611150 PSEN1P49768 467 aa21.72■■□□□ 1.07
CDK11B-205ENST00000611150 SLC52A1Q9NWF4 448 aa21.72■■□□□ 1.07
CDK11B-205ENST00000611150 CSPP1Q1MSJ5 1256 aa21.72■■□□□ 1.07
CDK11B-205ENST00000611150 CERS3Q8IU89 383 aa21.72■■□□□ 1.07
CDK11B-205ENST00000611150 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
CDK11B-205ENST00000611150 KTN1Q86UP2 1357 aaKnown RBP21.71■■□□□ 1.07
CDK11B-205ENST00000611150 PTMAP06454 111 aaKnown RBP21.7■■□□□ 1.07
CDK11B-205ENST00000611150 NCOA2Q15596 1464 aa21.7■■□□□ 1.06
CDK11B-205ENST00000611150 AEBP1Q8IUX7 1158 aa21.7■■□□□ 1.06
CDK11B-205ENST00000611150 ERCC6L2Q5T890 1561 aa21.69■■□□□ 1.06
CDK11B-205ENST00000611150 PPP1R9BQ96SB3 815 aa21.69■■□□□ 1.06
CDK11B-205ENST00000611150 SASS6Q6UVJ0 657 aa21.69■■□□□ 1.06
CDK11B-205ENST00000611150 SETD5Q9C0A6 1442 aa21.68■■□□□ 1.06
CDK11B-205ENST00000611150 ZNF500O60304 480 aaPredicted RBP21.67■■□□□ 1.06
CDK11B-205ENST00000611150 KCNJ4P48050 445 aa21.67■■□□□ 1.06
CDK11B-205ENST00000611150 SKAP1Q86WV1 359 aa21.67■■□□□ 1.06
CDK11B-205ENST00000611150 YY1AP1Q9H869 796 aa21.67■■□□□ 1.06
CDK11B-205ENST00000611150 CARMIL1Q5VZK9 1371 aa21.66■■□□□ 1.06
CDK11B-205ENST00000611150 TONSLQ96HA7 1378 aa21.66■■□□□ 1.06
CDK11B-205ENST00000611150 MYCNP04198 464 aaPredicted RBP21.66■■□□□ 1.06
CDK11B-205ENST00000611150 HS1BP3Q53T59 392 aa21.65■■□□□ 1.06
CDK11B-205ENST00000611150 JPH4Q96JJ6 628 aa21.65■■□□□ 1.06
CDK11B-205ENST00000611150 GEMIN8Q9NWZ8 242 aaKnown RBP21.65■■□□□ 1.06
CDK11B-205ENST00000611150 PATL2C9JE40 543 aaKnown RBP21.64■■□□□ 1.05
CDK11B-205ENST00000611150 RCAN3Q9UKA8 241 aa21.64■■□□□ 1.05
CDK11B-205ENST00000611150 ZNF771Q7L3S4 317 aaPredicted RBP21.63■■□□□ 1.05
CDK11B-205ENST00000611150 SOX12O15370 315 aa21.62■■□□□ 1.05
CDK11B-205ENST00000611150 PRG4Q92954 1404 aaPredicted RBP21.62■■□□□ 1.05
CDK11B-205ENST00000611150 KIAA0586Q9BVV6 1533 aa21.61■■□□□ 1.05
CDK11B-205ENST00000611150 DDX11L8A8MPP1 907 aa21.6■■□□□ 1.05
CDK11B-205ENST00000611150 NBPF1Q3BBV0 1214 aa21.6■■□□□ 1.05
CDK11B-205ENST00000611150 RALBP1Q15311 655 aa21.59■■□□□ 1.05
CDK11B-205ENST00000611150 NGEFQ8N5V2 710 aa21.59■■□□□ 1.05
CDK11B-205ENST00000611150 CCDC66A2RUB6 948 aa21.59■■□□□ 1.05
CDK11B-205ENST00000611150 KIF21BO75037 1637 aa21.58■■□□□ 1.05
CDK11B-205ENST00000611150 TSPYL1Q9H0U9 437 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms