RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 MAP3K7O43318 606 aa13.2□□□□□ -0.3
CCL16-204ENST00000610493 JPH4Q96JJ6 628 aa13.2□□□□□ -0.3
CCL16-204ENST00000610493 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
CCL16-204ENST00000610493 EPAS1Q99814 870 aa13.19□□□□□ -0.3
CCL16-204ENST00000610493 TYW1BQ6NUM6 668 aa13.18□□□□□ -0.3
CCL16-204ENST00000610493 FOSBP53539 338 aa13.17□□□□□ -0.3
CCL16-204ENST00000610493 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
CCL16-204ENST00000610493 ZMYND10O75800 440 aa13.15□□□□□ -0.3
CCL16-204ENST00000610493 TSR1Q2NL82 804 aaKnown RBP13.14□□□□□ -0.31
CCL16-204ENST00000610493 CDHR5Q9HBB8 845 aa13.14□□□□□ -0.31
CCL16-204ENST00000610493 UNC13AQ9UPW8 1703 aa13.14□□□□□ -0.31
CCL16-204ENST00000610493 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
CCL16-204ENST00000610493 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
CCL16-204ENST00000610493 CCDC88BA6NC98 1476 aa13.12□□□□□ -0.31
CCL16-204ENST00000610493 GPR37O15354 613 aa13.12□□□□□ -0.31
CCL16-204ENST00000610493 ST18O60284 1047 aa13.12□□□□□ -0.31
CCL16-204ENST00000610493 SLC24A3Q9HC58 644 aa13.12□□□□□ -0.31
CCL16-204ENST00000610493 FAM163AQ96GL9 167 aaPredicted RBP13.11□□□□□ -0.31
CCL16-204ENST00000610493 ADAM33Q9BZ11 813 aa13.11□□□□□ -0.31
CCL16-204ENST00000610493 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
CCL16-204ENST00000610493 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
CCL16-204ENST00000610493 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
CCL16-204ENST00000610493 FCHSD2O94868 740 aa13.1□□□□□ -0.31
CCL16-204ENST00000610493 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
CCL16-204ENST00000610493 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
CCL16-204ENST00000610493 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
CCL16-204ENST00000610493 PTGDRQ13258 359 aa13.08□□□□□ -0.32
CCL16-204ENST00000610493 MARVELD3Q96A59 401 aa13.08□□□□□ -0.32
CCL16-204ENST00000610493 C6orf132Q5T0Z8 1188 aa13.07□□□□□ -0.32
CCL16-204ENST00000610493 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
CCL16-204ENST00000610493 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
CCL16-204ENST00000610493 FECHP22830 423 aa13.06□□□□□ -0.32
CCL16-204ENST00000610493 ERBB3P21860 1342 aa13.05□□□□□ -0.32
CCL16-204ENST00000610493 GNPATO15228 680 aa13.05□□□□□ -0.32
CCL16-204ENST00000610493 HIC1Q14526 733 aa13.05□□□□□ -0.32
CCL16-204ENST00000610493 EMP3P54852 163 aa13.04□□□□□ -0.32
CCL16-204ENST00000610493 NPDC1Q9NQX5 325 aaPredicted RBP13.04□□□□□ -0.32
CCL16-204ENST00000610493 VARS2Q5ST30 1063 aaKnown RBP13.02□□□□□ -0.32
CCL16-204ENST00000610493 EEA1Q15075 1411 aa12.99□□□□□ -0.33
CCL16-204ENST00000610493 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
CCL16-204ENST00000610493 BCL2L12Q9HB09 334 aa12.99□□□□□ -0.33
CCL16-204ENST00000610493 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
CCL16-204ENST00000610493 PTPREP23469 700 aa12.98□□□□□ -0.33
CCL16-204ENST00000610493 MAP2K5Q13163 448 aa12.98□□□□□ -0.33
CCL16-204ENST00000610493 AK7Q96M32 723 aa12.97□□□□□ -0.33
CCL16-204ENST00000610493 KCNK17Q96T54 332 aa12.97□□□□□ -0.33
CCL16-204ENST00000610493 COL9A1P20849 921 aa12.96□□□□□ -0.33
CCL16-204ENST00000610493 MINK1Q8N4C8 1332 aaPredicted RBP12.95□□□□□ -0.34
CCL16-204ENST00000610493 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
CCL16-204ENST00000610493 CCDC102AQ96A19 550 aa12.95□□□□□ -0.34
CCL16-204ENST00000610493 IRF6O14896 467 aa12.94□□□□□ -0.34
CCL16-204ENST00000610493 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
CCL16-204ENST00000610493 ATAD2BQ9ULI0 1458 aa12.93□□□□□ -0.34
CCL16-204ENST00000610493 ABCC8Q09428 1581 aa12.93□□□□□ -0.34
CCL16-204ENST00000610493 LCE2DQ5TA82 110 aaPredicted RBP12.93□□□□□ -0.34
CCL16-204ENST00000610493 FAM161AQ3B820 660 aa12.92□□□□□ -0.34
CCL16-204ENST00000610493 KCNH8Q96L42 1107 aa12.92□□□□□ -0.34
CCL16-204ENST00000610493 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
CCL16-204ENST00000610493 PSEN2P49810 448 aa12.91□□□□□ -0.34
CCL16-204ENST00000610493 CDCA7LQ96GN5 454 aa12.91□□□□□ -0.34
CCL16-204ENST00000610493 PPP1R3GB7ZBB8 358 aa12.91□□□□□ -0.34
CCL16-204ENST00000610493 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
CCL16-204ENST00000610493 TRIM66O15016 1216 aa12.9□□□□□ -0.34
CCL16-204ENST00000610493 PRSS12P56730 875 aa12.9□□□□□ -0.34
CCL16-204ENST00000610493 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
CCL16-204ENST00000610493 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
CCL16-204ENST00000610493 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
CCL16-204ENST00000610493 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
CCL16-204ENST00000610493 POTEB3A0JP26 581 aa12.88□□□□□ -0.35
CCL16-204ENST00000610493 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
CCL16-204ENST00000610493 POTEBQ6S5H4 581 aa12.88□□□□□ -0.35
CCL16-204ENST00000610493 POTEEQ6S8J3 1075 aa12.87□□□□□ -0.35
CCL16-204ENST00000610493 SOGA1O94964 1423 aa12.86□□□□□ -0.35
CCL16-204ENST00000610493 PROX2Q3B8N5 592 aa12.86□□□□□ -0.35
CCL16-204ENST00000610493 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
CCL16-204ENST00000610493 ARHGAP33O14559 1287 aa12.85□□□□□ -0.35
CCL16-204ENST00000610493 FAM198AQ9UFP1 575 aa12.85□□□□□ -0.35
CCL16-204ENST00000610493 PDE4DQ08499 809 aa12.84□□□□□ -0.35
CCL16-204ENST00000610493 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
CCL16-204ENST00000610493 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
CCL16-204ENST00000610493 TSKSQ9UJT2 592 aa12.84□□□□□ -0.35
CCL16-204ENST00000610493 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
CCL16-204ENST00000610493 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
CCL16-204ENST00000610493 TTC13Q8NBP0 860 aa12.82□□□□□ -0.36
CCL16-204ENST00000610493 ADGRG1Q9Y653 693 aa12.82□□□□□ -0.36
CCL16-204ENST00000610493 TRIM6-TRIM34B2RNG4 842 aa12.81□□□□□ -0.36
CCL16-204ENST00000610493 NLRP7Q8WX94 980 aa12.81□□□□□ -0.36
CCL16-204ENST00000610493 CEP162Q5TB80 1403 aa12.8□□□□□ -0.36
CCL16-204ENST00000610493 ZBED2Q9BTP6 218 aa12.8□□□□□ -0.36
CCL16-204ENST00000610493 TTLL12Q14166 644 aaPredicted RBP12.8□□□□□ -0.36
CCL16-204ENST00000610493 PHOX2BQ99453 314 aa12.8□□□□□ -0.36
CCL16-204ENST00000610493 PBX2P40425 430 aa12.79□□□□□ -0.36
CCL16-204ENST00000610493 METTL3Q86U44 580 aaKnown RBP12.79□□□□□ -0.36
CCL16-204ENST00000610493 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
CCL16-204ENST00000610493 OATP04181 439 aa12.78□□□□□ -0.36
CCL16-204ENST00000610493 NUDT18Q6ZVK8 323 aa12.78□□□□□ -0.36
CCL16-204ENST00000610493 C3orf80F5H4A9 247 aa12.77□□□□□ -0.36
CCL16-204ENST00000610493 SMAPO00193 183 aa12.77□□□□□ -0.36
CCL16-204ENST00000610493 PACS2Q86VP3 889 aa12.77□□□□□ -0.36
CCL16-204ENST00000610493 PNMA3Q9UL41 463 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms