RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
LINC02538-201ENST00000609107 IPO9Q96P70 1041 aaKnown RBP18.35■□□□□ 0.53
LINC02538-201ENST00000609107 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
LINC02538-201ENST00000609107 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
LINC02538-201ENST00000609107 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.53
LINC02538-201ENST00000609107 STK26Q9P289 416 aa18.34■□□□□ 0.53
LINC02538-201ENST00000609107 BRD4O60885 1362 aaPredicted RBP18.34■□□□□ 0.53
LINC02538-201ENST00000609107 FANCIQ9NVI1 1328 aa18.33■□□□□ 0.53
LINC02538-201ENST00000609107 WASHC2CQ9Y4E1 1318 aa18.33■□□□□ 0.52
LINC02538-201ENST00000609107 CCDC146Q8IYE0 955 aa18.31■□□□□ 0.52
LINC02538-201ENST00000609107 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
LINC02538-201ENST00000609107 ARXQ96QS3 562 aa18.29■□□□□ 0.52
LINC02538-201ENST00000609107 EXOC6Q8TAG9 804 aa18.29■□□□□ 0.52
LINC02538-201ENST00000609107 DEKP35659 375 aaKnown RBP18.28■□□□□ 0.52
LINC02538-201ENST00000609107 IPO8O15397 1037 aaKnown RBP18.28■□□□□ 0.52
LINC02538-201ENST00000609107 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
LINC02538-201ENST00000609107 ANKRD30BQ9BXX2 1392 aa18.28■□□□□ 0.52
LINC02538-201ENST00000609107 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
LINC02538-201ENST00000609107 TRAK1Q9UPV9 953 aa18.28■□□□□ 0.52
LINC02538-201ENST00000609107 CENPJQ9HC77 1338 aaPredicted RBP18.28■□□□□ 0.52
LINC02538-201ENST00000609107 GOLGA6L22H0YM25 854 aa18.27■□□□□ 0.52
LINC02538-201ENST00000609107 TERF2IPQ9NYB0 399 aa18.27■□□□□ 0.52
LINC02538-201ENST00000609107 RWDD1Q9H446 243 aaPredicted RBP18.27■□□□□ 0.52
LINC02538-201ENST00000609107 ABCC5O15440 1437 aa18.27■□□□□ 0.51
LINC02538-201ENST00000609107 CASC1Q6TDU7 716 aa18.27■□□□□ 0.51
LINC02538-201ENST00000609107 C14orf37Q86TY3 774 aa18.26■□□□□ 0.51
LINC02538-201ENST00000609107 NGEFQ8N5V2 710 aa18.26■□□□□ 0.51
LINC02538-201ENST00000609107 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
LINC02538-201ENST00000609107 PMFBP1Q8TBY8 1022 aa18.26■□□□□ 0.51
LINC02538-201ENST00000609107 AKNAQ7Z591 1439 aa18.26■□□□□ 0.51
LINC02538-201ENST00000609107 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
LINC02538-201ENST00000609107 CALD1Q05682 793 aaKnown RBP18.24■□□□□ 0.51
LINC02538-201ENST00000609107 E9PSI1 815 aa18.24■□□□□ 0.51
LINC02538-201ENST00000609107 CENPQQ7L2Z9 268 aaPredicted RBP18.24■□□□□ 0.51
LINC02538-201ENST00000609107 MLECQ14165 292 aa18.23■□□□□ 0.51
LINC02538-201ENST00000609107 VGFO15240 615 aaPredicted RBP18.22■□□□□ 0.51
LINC02538-201ENST00000609107 CAMSAP2Q08AD1 1489 aa18.22■□□□□ 0.51
LINC02538-201ENST00000609107 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
LINC02538-201ENST00000609107 PLIN1O60240 522 aa18.21■□□□□ 0.51
LINC02538-201ENST00000609107 PDE4AP27815 886 aa18.21■□□□□ 0.51
LINC02538-201ENST00000609107 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
LINC02538-201ENST00000609107 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
LINC02538-201ENST00000609107 EVC2Q86UK5 1308 aa18.19■□□□□ 0.5
LINC02538-201ENST00000609107 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
LINC02538-201ENST00000609107 PNISRQ8TF01 805 aaKnown RBP18.18■□□□□ 0.5
LINC02538-201ENST00000609107 ZBTB7CA1YPR0 619 aa18.18■□□□□ 0.5
LINC02538-201ENST00000609107 APAF1O14727 1248 aa18.18■□□□□ 0.5
LINC02538-201ENST00000609107 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
LINC02538-201ENST00000609107 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
LINC02538-201ENST00000609107 CFAP43Q8NDM7 1665 aa18.18■□□□□ 0.5
LINC02538-201ENST00000609107 UGGT2Q9NYU1 1516 aa18.17■□□□□ 0.5
LINC02538-201ENST00000609107 RPRD2Q5VT52 1461 aaKnown RBP18.17■□□□□ 0.5
LINC02538-201ENST00000609107 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
LINC02538-201ENST00000609107 NBPF1Q3BBV0 1214 aa18.17■□□□□ 0.5
LINC02538-201ENST00000609107 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
LINC02538-201ENST00000609107 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
LINC02538-201ENST00000609107 PTPRKQ15262 1439 aa18.17■□□□□ 0.5
LINC02538-201ENST00000609107 ITPRIPQ8IWB1 547 aa18.16■□□□□ 0.5
LINC02538-201ENST00000609107 PLB1Q6P1J6 1458 aa18.16■□□□□ 0.5
LINC02538-201ENST00000609107 NCOA1Q15788 1441 aa18.16■□□□□ 0.5
LINC02538-201ENST00000609107 CFAP44Q96MT7 982 aa18.16■□□□□ 0.5
LINC02538-201ENST00000609107 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
LINC02538-201ENST00000609107 CTTNBP2Q8WZ74 1663 aa18.15■□□□□ 0.5
LINC02538-201ENST00000609107 AFAP1Q8N556 730 aa18.15■□□□□ 0.5
LINC02538-201ENST00000609107 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
LINC02538-201ENST00000609107 CCDC141Q6ZP82 1450 aa18.13■□□□□ 0.49
LINC02538-201ENST00000609107 C11orf95C9JLR9 678 aaPredicted RBP18.13■□□□□ 0.49
LINC02538-201ENST00000609107 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
LINC02538-201ENST00000609107 TRIM44Q96DX7 344 aaPredicted RBP18.13■□□□□ 0.49
LINC02538-201ENST00000609107 RRP7AQ9Y3A4 280 aaKnown RBP18.12■□□□□ 0.49
LINC02538-201ENST00000609107 CLUAP1Q96AJ1 413 aa18.12■□□□□ 0.49
LINC02538-201ENST00000609107 ARHGEF11O15085 1522 aa18.12■□□□□ 0.49
LINC02538-201ENST00000609107 NCLP19338 710 aaKnown RBP18.12■□□□□ 0.49
LINC02538-201ENST00000609107 ADAMTS8Q9UP79 889 aa18.1■□□□□ 0.49
LINC02538-201ENST00000609107 KIF14Q15058 1648 aa18.1■□□□□ 0.49
LINC02538-201ENST00000609107 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
LINC02538-201ENST00000609107 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
LINC02538-201ENST00000609107 USP35Q9P2H5 1018 aa18.09■□□□□ 0.49
LINC02538-201ENST00000609107 PPP2R1AP30153 589 aa18.08■□□□□ 0.49
LINC02538-201ENST00000609107 RTF1Q92541 710 aaKnown RBP18.08■□□□□ 0.49
LINC02538-201ENST00000609107 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.48
LINC02538-201ENST00000609107 ERBINQ96RT1 1412 aa18.08■□□□□ 0.48
LINC02538-201ENST00000609107 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
LINC02538-201ENST00000609107 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
LINC02538-201ENST00000609107 SOX12O15370 315 aa18.06■□□□□ 0.48
LINC02538-201ENST00000609107 PLEKHG5O94827 1062 aa18.06■□□□□ 0.48
LINC02538-201ENST00000609107 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
LINC02538-201ENST00000609107 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
LINC02538-201ENST00000609107 L1TD1Q5T7N2 865 aaKnown RBP18.05■□□□□ 0.48
LINC02538-201ENST00000609107 CDCA7LQ96GN5 454 aa18.05■□□□□ 0.48
LINC02538-201ENST00000609107 COG6Q9Y2V7 657 aa18.04■□□□□ 0.48
LINC02538-201ENST00000609107 GPATCH8Q9UKJ3 1502 aaKnown RBP18.03■□□□□ 0.48
LINC02538-201ENST00000609107 SCAPERQ9BY12 1400 aa18.03■□□□□ 0.48
LINC02538-201ENST00000609107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.02■□□□□ 0.48
LINC02538-201ENST00000609107 SLKQ9H2G2 1235 aaPredicted RBP18.02■□□□□ 0.48
LINC02538-201ENST00000609107 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
LINC02538-201ENST00000609107 RAPGEF6Q8TEU7 1601 aa18.01■□□□□ 0.47
LINC02538-201ENST00000609107 MINK1Q8N4C8 1332 aaPredicted RBP18.01■□□□□ 0.47
LINC02538-201ENST00000609107 AAMPQ13685 434 aa18.01■□□□□ 0.47
LINC02538-201ENST00000609107 SPRYD3Q8NCJ5 442 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms