RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 C1orf141Q5JVX7 400 aa4.9□□□□□ -1.63
LINC01278-202ENST00000608623 TERF2IPQ9NYB0 399 aa4.9□□□□□ -1.63
LINC01278-202ENST00000608623 MAPK8IP3Q9UPT6 1336 aa4.9□□□□□ -1.63
LINC01278-202ENST00000608623 GRIN2AQ12879 1464 aa4.9□□□□□ -1.63
LINC01278-202ENST00000608623 ARHGEF11O15085 1522 aa4.9□□□□□ -1.63
LINC01278-202ENST00000608623 DNMBPQ6XZF7 1577 aa4.89□□□□□ -1.63
LINC01278-202ENST00000608623 NEFLP07196 543 aa4.89□□□□□ -1.63
LINC01278-202ENST00000608623 ZC3H6P61129 1189 aaKnown RBP4.89□□□□□ -1.63
LINC01278-202ENST00000608623 FOXO3O43524 673 aa4.89□□□□□ -1.63
LINC01278-202ENST00000608623 FBXO31Q5XUX0 539 aaPredicted RBP4.89□□□□□ -1.63
LINC01278-202ENST00000608623 USP21Q9UK80 565 aa4.89□□□□□ -1.63
LINC01278-202ENST00000608623 WWC3Q9ULE0 1092 aa4.89□□□□□ -1.63
LINC01278-202ENST00000608623 FRAT2O75474 233 aaPredicted RBP4.89□□□□□ -1.63
LINC01278-202ENST00000608623 QTRT2Q9H974 415 aaKnown RBP4.89□□□□□ -1.63
LINC01278-202ENST00000608623 STK32BQ9NY57 414 aa4.89□□□□□ -1.63
LINC01278-202ENST00000608623 CLEC11AQ9Y240 323 aa4.89□□□□□ -1.63
LINC01278-202ENST00000608623 URB2Q14146 1524 aaKnown RBP4.89□□□□□ -1.63
LINC01278-202ENST00000608623 TTC5Q8N0Z6 440 aa4.88□□□□□ -1.63
LINC01278-202ENST00000608623 RBM42Q9BTD8 480 aaKnown RBP4.88□□□□□ -1.63
LINC01278-202ENST00000608623 SLC52A1Q9NWF4 448 aa4.88□□□□□ -1.63
LINC01278-202ENST00000608623 FANCAO15360 1455 aa4.88□□□□□ -1.63
LINC01278-202ENST00000608623 KIAA0586Q9BVV6 1533 aa4.88□□□□□ -1.63
LINC01278-202ENST00000608623 CEP162Q5TB80 1403 aa4.88□□□□□ -1.63
LINC01278-202ENST00000608623 ADGRL1O94910 1474 aa4.88□□□□□ -1.63
LINC01278-202ENST00000608623 WDHD1O75717 1129 aaPredicted RBP4.87□□□□□ -1.63
LINC01278-202ENST00000608623 PHLDB1Q86UU1 1377 aa4.87□□□□□ -1.63
LINC01278-202ENST00000608623 NCBP3Q53F19 620 aaKnown RBP4.87□□□□□ -1.63
LINC01278-202ENST00000608623 LRPPRCP42704 1394 aaKnown RBP4.87□□□□□ -1.63
LINC01278-202ENST00000608623 ZNF316A6NFI3 1004 aaPredicted RBP4.87□□□□□ -1.63
LINC01278-202ENST00000608623 NLRP13Q86W25 1043 aa4.87□□□□□ -1.63
LINC01278-202ENST00000608623 TNRQ92752 1358 aa4.87□□□□□ -1.63
LINC01278-202ENST00000608623 FAM135AQ9P2D6 1515 aa4.87□□□□□ -1.63
LINC01278-202ENST00000608623 COG3Q96JB2 828 aa4.87□□□□□ -1.63
LINC01278-202ENST00000608623 SALL2Q9Y467 1007 aaPredicted RBP4.87□□□□□ -1.63
LINC01278-202ENST00000608623 TAF7LQ5H9L4 462 aa4.86□□□□□ -1.63
LINC01278-202ENST00000608623 AMOTL2Q9Y2J4 779 aa4.86□□□□□ -1.63
LINC01278-202ENST00000608623 TULP1O00294 542 aaPredicted RBP4.86□□□□□ -1.63
LINC01278-202ENST00000608623 CCAR1Q8IX12 1150 aaKnown RBP4.86□□□□□ -1.63
LINC01278-202ENST00000608623 APBA3O96018 575 aa4.86□□□□□ -1.63
LINC01278-202ENST00000608623 MORC1Q86VD1 984 aa4.86□□□□□ -1.63
LINC01278-202ENST00000608623 ZNF526Q8TF50 670 aaPredicted RBP4.86□□□□□ -1.63
LINC01278-202ENST00000608623 TMF1P82094 1093 aa4.85□□□□□ -1.63
LINC01278-202ENST00000608623 NEUROD2Q15784 382 aa4.85□□□□□ -1.63
LINC01278-202ENST00000608623 EXOC5O00471 708 aa4.85□□□□□ -1.63
LINC01278-202ENST00000608623 TRPC5Q9UL62 973 aaPredicted RBP4.85□□□□□ -1.63
LINC01278-202ENST00000608623 CHMP3Q9Y3E7 222 aa4.85□□□□□ -1.63
LINC01278-202ENST00000608623 ARHGAP35Q9NRY4 1499 aa4.85□□□□□ -1.63
LINC01278-202ENST00000608623 NGEFQ8N5V2 710 aa4.85□□□□□ -1.63
LINC01278-202ENST00000608623 DHX57Q6P158 1386 aaKnown RBP4.85□□□□□ -1.63
LINC01278-202ENST00000608623 TFCP2L1Q9NZI6 479 aa4.84□□□□□ -1.63
LINC01278-202ENST00000608623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC01278-202ENST00000608623 ZNF644Q9H582 1327 aaPredicted RBP4.84□□□□□ -1.63
LINC01278-202ENST00000608623 HSPA1LP34931 641 aa4.84□□□□□ -1.63
LINC01278-202ENST00000608623 TEFQ10587 303 aa4.84□□□□□ -1.63
LINC01278-202ENST00000608623 C19orf44Q9H6X5 657 aa4.84□□□□□ -1.63
LINC01278-202ENST00000608623 ZNF219Q9P2Y4 722 aaPredicted RBP4.84□□□□□ -1.63
LINC01278-202ENST00000608623 FAM177BA6PVY3 158 aa4.84□□□□□ -1.63
LINC01278-202ENST00000608623 KRT28Q7Z3Y7 464 aa4.84□□□□□ -1.63
LINC01278-202ENST00000608623 AK7Q96M32 723 aa4.84□□□□□ -1.63
LINC01278-202ENST00000608623 NPHP3Q7Z494 1330 aa4.84□□□□□ -1.64
LINC01278-202ENST00000608623 TTLL12Q14166 644 aaPredicted RBP4.84□□□□□ -1.64
LINC01278-202ENST00000608623 YTHDC1Q96MU7 727 aaKnown RBP4.84□□□□□ -1.64
LINC01278-202ENST00000608623 PNNQ9H307 717 aaKnown RBP4.84□□□□□ -1.64
LINC01278-202ENST00000608623 ZNF335Q9H4Z2 1342 aaPredicted RBP4.84□□□□□ -1.64
LINC01278-202ENST00000608623 ANP32CO43423 234 aa4.83□□□□□ -1.64
LINC01278-202ENST00000608623 SLAIN2Q9P270 581 aa4.83□□□□□ -1.64
LINC01278-202ENST00000608623 TATP17735 454 aaPredicted RBP4.83□□□□□ -1.64
LINC01278-202ENST00000608623 TMEM132EQ6IEE7 984 aa4.83□□□□□ -1.64
LINC01278-202ENST00000608623 CAPN15O75808 1086 aa4.83□□□□□ -1.64
LINC01278-202ENST00000608623 SLC4A2P04920 1241 aa4.83□□□□□ -1.64
LINC01278-202ENST00000608623 KIF15Q9NS87 1388 aa4.83□□□□□ -1.64
LINC01278-202ENST00000608623 KCNJ4P48050 445 aa4.83□□□□□ -1.64
LINC01278-202ENST00000608623 OS9Q13438 667 aaPredicted RBP4.83□□□□□ -1.64
LINC01278-202ENST00000608623 PHF14O94880 888 aa4.82□□□□□ -1.64
LINC01278-202ENST00000608623 AIDAQ96BJ3 306 aa4.82□□□□□ -1.64
LINC01278-202ENST00000608623 TRIM34Q9BYJ4 488 aa4.82□□□□□ -1.64
LINC01278-202ENST00000608623 PHF8Q9UPP1 1060 aa4.82□□□□□ -1.64
LINC01278-202ENST00000608623 EVC2Q86UK5 1308 aa4.82□□□□□ -1.64
LINC01278-202ENST00000608623 PLEKHH2Q8IVE3 1493 aa4.82□□□□□ -1.64
LINC01278-202ENST00000608623 PPP4R3CPQ6ZMV5 832 aa4.82□□□□□ -1.64
LINC01278-202ENST00000608623 EIF3AQ14152 1382 aaKnown RBP4.82□□□□□ -1.64
LINC01278-202ENST00000608623 BICDL1Q6ZP65 573 aa4.82□□□□□ -1.64
LINC01278-202ENST00000608623 KRI1Q8N9T8 703 aaKnown RBP4.82□□□□□ -1.64
LINC01278-202ENST00000608623 TCERG1O14776 1098 aaKnown RBP4.81□□□□□ -1.64
LINC01278-202ENST00000608623 CTDP1Q9Y5B0 961 aaPredicted RBP4.81□□□□□ -1.64
LINC01278-202ENST00000608623 KDM6BO15054 1643 aa4.81□□□□□ -1.64
LINC01278-202ENST00000608623 SENP3-EIF4A1A0A087X0R7 540 aa4.81□□□□□ -1.64
LINC01278-202ENST00000608623 FAM98CQ17RN3 349 aaKnown RBP4.81□□□□□ -1.64
LINC01278-202ENST00000608623 PSDA5PKW4 1024 aaPredicted RBP4.81□□□□□ -1.64
LINC01278-202ENST00000608623 ZPR1O75312 459 aa4.81□□□□□ -1.64
LINC01278-202ENST00000608623 DDB1Q16531 1140 aa4.81□□□□□ -1.64
LINC01278-202ENST00000608623 MYH16Q9H6N6 1097 aa4.81□□□□□ -1.64
LINC01278-202ENST00000608623 WDR7Q9Y4E6 1490 aa4.81□□□□□ -1.64
LINC01278-202ENST00000608623 CCDC144AA2RUR9 1427 aa4.8□□□□□ -1.64
LINC01278-202ENST00000608623 CHRNA2Q15822 529 aa4.8□□□□□ -1.64
LINC01278-202ENST00000608623 DAXXQ9UER7 740 aaPredicted RBP4.8□□□□□ -1.64
LINC01278-202ENST00000608623 ZMYM3Q14202 1370 aa4.8□□□□□ -1.64
LINC01278-202ENST00000608623 PRAM1Q96QH2 718 aa4.8□□□□□ -1.64
LINC01278-202ENST00000608623 CHMP4AQ9BY43 222 aa4.8□□□□□ -1.64
LINC01278-202ENST00000608623 GORABQ5T7V8 394 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms