RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 KIDINS220Q9ULH0 1771 aa9.71□□□□□ -0.85
LINC00649-213ENST00000608431 AFAP1Q8N556 730 aa9.71□□□□□ -0.86
LINC00649-213ENST00000608431 STRCP1A6NGW2 1772 aa9.7□□□□□ -0.86
LINC00649-213ENST00000608431 DEPDC5O75140 1603 aa9.7□□□□□ -0.86
LINC00649-213ENST00000608431 IQGAP1P46940 1657 aa9.69□□□□□ -0.86
LINC00649-213ENST00000608431 ARHGAP5Q13017 1502 aa9.69□□□□□ -0.86
LINC00649-213ENST00000608431 FKBP8Q14318 412 aa9.69□□□□□ -0.86
LINC00649-213ENST00000608431 ITSN2Q9NZM3 1697 aa9.68□□□□□ -0.86
LINC00649-213ENST00000608431 LRRC7Q96NW7 1537 aa9.68□□□□□ -0.86
LINC00649-213ENST00000608431 CDC42BPBQ9Y5S2 1711 aa9.68□□□□□ -0.86
LINC00649-213ENST00000608431 XIRP1Q702N8 1843 aaKnown RBP9.67□□□□□ -0.86
LINC00649-213ENST00000608431 PRXQ9BXM0 1461 aa9.66□□□□□ -0.86
LINC00649-213ENST00000608431 KIF14Q15058 1648 aa9.66□□□□□ -0.86
LINC00649-213ENST00000608431 MED14O60244 1454 aa9.66□□□□□ -0.86
LINC00649-213ENST00000608431 CAPN15O75808 1086 aa9.65□□□□□ -0.86
LINC00649-213ENST00000608431 ANKLE2Q86XL3 938 aa9.65□□□□□ -0.86
LINC00649-213ENST00000608431 CDK13Q14004 1512 aaKnown RBP9.64□□□□□ -0.87
LINC00649-213ENST00000608431 FAM135BQ49AJ0 1406 aa9.64□□□□□ -0.87
LINC00649-213ENST00000608431 MKRN4PQ13434 485 aaPredicted RBP9.63□□□□□ -0.87
LINC00649-213ENST00000608431 ROBO1Q9Y6N7 1651 aa9.63□□□□□ -0.87
LINC00649-213ENST00000608431 NPHP4O75161 1426 aaPredicted RBP9.63□□□□□ -0.87
LINC00649-213ENST00000608431 ABCC1P33527 1531 aa9.62□□□□□ -0.87
LINC00649-213ENST00000608431 PREX2Q70Z35 1606 aa9.61□□□□□ -0.87
LINC00649-213ENST00000608431 POLA2Q14181 598 aa9.61□□□□□ -0.87
LINC00649-213ENST00000608431 ZNF772Q68DY9 489 aaPredicted RBP9.61□□□□□ -0.87
LINC00649-213ENST00000608431 PHLPP1O60346 1717 aa9.61□□□□□ -0.87
LINC00649-213ENST00000608431 CDK12Q9NYV4 1490 aaPredicted RBP9.6□□□□□ -0.87
LINC00649-213ENST00000608431 EP400Q96L91 3159 aa9.6□□□□□ -0.87
LINC00649-213ENST00000608431 THEMISQ8N1K5 641 aaPredicted RBP9.6□□□□□ -0.87
LINC00649-213ENST00000608431 TRIM52Q96A61 297 aa9.6□□□□□ -0.87
LINC00649-213ENST00000608431 CDK11AQ9UQ88 783 aaPredicted RBP9.6□□□□□ -0.87
LINC00649-213ENST00000608431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.6□□□□□ -0.87
LINC00649-213ENST00000608431 PLXNC1O60486 1568 aa9.59□□□□□ -0.87
LINC00649-213ENST00000608431 ZC3H13Q5T200 1668 aaKnown RBP9.59□□□□□ -0.87
LINC00649-213ENST00000608431 ADGBQ8N7X0 1667 aa9.58□□□□□ -0.88
LINC00649-213ENST00000608431 FAM135AQ9P2D6 1515 aa9.58□□□□□ -0.88
LINC00649-213ENST00000608431 SAMD9LQ8IVG5 1584 aa9.58□□□□□ -0.88
LINC00649-213ENST00000608431 UGGT1Q9NYU2 1555 aa9.58□□□□□ -0.88
LINC00649-213ENST00000608431 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
LINC00649-213ENST00000608431 TNRQ92752 1358 aa9.57□□□□□ -0.88
LINC00649-213ENST00000608431 JCADQ9P266 1359 aa9.57□□□□□ -0.88
LINC00649-213ENST00000608431 LRRC9Q6ZRR7 1453 aa9.57□□□□□ -0.88
LINC00649-213ENST00000608431 CLIP1P30622 1438 aa9.56□□□□□ -0.88
LINC00649-213ENST00000608431 KDM5DQ9BY66 1539 aa9.56□□□□□ -0.88
LINC00649-213ENST00000608431 NLRP1Q9C000 1473 aa9.56□□□□□ -0.88
LINC00649-213ENST00000608431 RXRBP28702 533 aa9.56□□□□□ -0.88
LINC00649-213ENST00000608431 GGT6Q6P531 493 aa9.55□□□□□ -0.88
LINC00649-213ENST00000608431 CDC42BPAQ5VT25 1732 aa9.55□□□□□ -0.88
LINC00649-213ENST00000608431 ATP7AQ04656 1500 aa9.55□□□□□ -0.88
LINC00649-213ENST00000608431 A2MP01023 1474 aa9.54□□□□□ -0.88
LINC00649-213ENST00000608431 MEX3CQ5U5Q3 659 aaKnown RBP9.54□□□□□ -0.88
LINC00649-213ENST00000608431 TROQ12816 1431 aaPredicted RBP9.54□□□□□ -0.88
LINC00649-213ENST00000608431 SHPRHQ149N8 1683 aa9.53□□□□□ -0.88
LINC00649-213ENST00000608431 ABCB7O75027 752 aa9.53□□□□□ -0.88
LINC00649-213ENST00000608431 INO80Q9ULG1 1556 aaPredicted RBP9.53□□□□□ -0.88
LINC00649-213ENST00000608431 SPAG9O60271 1321 aaKnown RBP9.53□□□□□ -0.88
LINC00649-213ENST00000608431 PZPP20742 1482 aa9.53□□□□□ -0.88
LINC00649-213ENST00000608431 SETBP1Q9Y6X0 1596 aa9.52□□□□□ -0.89
LINC00649-213ENST00000608431 SPATA31A6Q5VVP1 1343 aa9.52□□□□□ -0.89
LINC00649-213ENST00000608431 LRP5O75197 1615 aa9.5□□□□□ -0.89
LINC00649-213ENST00000608431 COL16A1Q07092 1604 aaPredicted RBP9.5□□□□□ -0.89
LINC00649-213ENST00000608431 DSG3P32926 999 aa9.5□□□□□ -0.89
LINC00649-213ENST00000608431 RBM33Q96EV2 1170 aaKnown RBP9.5□□□□□ -0.89
LINC00649-213ENST00000608431 FGD6Q6ZV73 1430 aa9.49□□□□□ -0.89
LINC00649-213ENST00000608431 RANGAP1P46060 587 aaPredicted RBP9.49□□□□□ -0.89
LINC00649-213ENST00000608431 LRP6O75581 1613 aa9.49□□□□□ -0.89
LINC00649-213ENST00000608431 MIA2Q96PC5 1412 aa9.48□□□□□ -0.89
LINC00649-213ENST00000608431 LRRIQ1Q96JM4 1722 aa9.48□□□□□ -0.89
LINC00649-213ENST00000608431 SYCP2Q9BX26 1530 aa9.48□□□□□ -0.89
LINC00649-213ENST00000608431 FBXO31Q5XUX0 539 aaPredicted RBP9.48□□□□□ -0.89
LINC00649-213ENST00000608431 UBR1Q8IWV7 1749 aa9.48□□□□□ -0.89
LINC00649-213ENST00000608431 CFAP65Q6ZU64 1925 aaKnown RBP9.47□□□□□ -0.89
LINC00649-213ENST00000608431 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
LINC00649-213ENST00000608431 ATP1B4Q9UN42 357 aaPredicted RBP9.47□□□□□ -0.89
LINC00649-213ENST00000608431 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
LINC00649-213ENST00000608431 FMN1Q68DA7 1419 aa9.47□□□□□ -0.89
LINC00649-213ENST00000608431 SCAF11Q99590 1463 aaKnown RBP9.46□□□□□ -0.9
LINC00649-213ENST00000608431 NUTM2BA6NNL0 878 aaPredicted RBP9.45□□□□□ -0.9
LINC00649-213ENST00000608431 NUTM2EB1AL46 878 aaPredicted RBP9.45□□□□□ -0.9
LINC00649-213ENST00000608431 NUTM2DQ5VT03 806 aaPredicted RBP9.45□□□□□ -0.9
LINC00649-213ENST00000608431 NUTM2AQ8IVF1 878 aaPredicted RBP9.45□□□□□ -0.9
LINC00649-213ENST00000608431 TMEM94Q12767 1356 aa9.45□□□□□ -0.9
LINC00649-213ENST00000608431 RGS12O14924 1447 aa9.45□□□□□ -0.9
LINC00649-213ENST00000608431 SPDYE4A6NLX3 237 aa9.44□□□□□ -0.9
LINC00649-213ENST00000608431 PLEKHH2Q8IVE3 1493 aa9.44□□□□□ -0.9
LINC00649-213ENST00000608431 ABCC3O15438 1527 aa9.44□□□□□ -0.9
LINC00649-213ENST00000608431 MAP3K1Q13233 1512 aa9.44□□□□□ -0.9
LINC00649-213ENST00000608431 TIAM1Q13009 1591 aa9.44□□□□□ -0.9
LINC00649-213ENST00000608431 RBM6P78332 1123 aaKnown RBP9.43□□□□□ -0.9
LINC00649-213ENST00000608431 MSH6P52701 1360 aa9.42□□□□□ -0.9
LINC00649-213ENST00000608431 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
LINC00649-213ENST00000608431 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
LINC00649-213ENST00000608431 KIAA1107Q9UPP5 1409 aa9.41□□□□□ -0.9
LINC00649-213ENST00000608431 WASHC2CQ9Y4E1 1318 aa9.41□□□□□ -0.9
LINC00649-213ENST00000608431 NGLY1Q96IV0 654 aa9.41□□□□□ -0.9
LINC00649-213ENST00000608431 ZNF777Q9ULD5 760 aaPredicted RBP9.41□□□□□ -0.9
LINC00649-213ENST00000608431 KDM5AP29375 1690 aaKnown RBP9.41□□□□□ -0.9
LINC00649-213ENST00000608431 AHDC1Q5TGY3 1603 aaPredicted RBP9.41□□□□□ -0.9
LINC00649-213ENST00000608431 SLIT1O75093 1534 aa9.41□□□□□ -0.9
LINC00649-213ENST00000608431 PRDM15P57071 1507 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms