RNA–Protein interactions for RNA: ENST00000608214.1

AP003481.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003481.1, Length 503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003481.1-202ENST00000608214 TROQ12816 1431 aaPredicted RBP11.39□□□□□ -0.59
AP003481.1-202ENST00000608214 TRIM26Q12899 539 aaPredicted RBP11.39□□□□□ -0.59
AP003481.1-202ENST00000608214 NPATQ14207 1427 aa11.38□□□□□ -0.59
AP003481.1-202ENST00000608214 CNTLNQ9NXG0 1405 aa11.38□□□□□ -0.59
AP003481.1-202ENST00000608214 KIDINS220Q9ULH0 1771 aa11.38□□□□□ -0.59
AP003481.1-202ENST00000608214 ZNF335Q9H4Z2 1342 aaPredicted RBP11.37□□□□□ -0.59
AP003481.1-202ENST00000608214 MROH2AA6NES4 1674 aa11.37□□□□□ -0.59
AP003481.1-202ENST00000608214 ABCC1P33527 1531 aa11.37□□□□□ -0.59
AP003481.1-202ENST00000608214 ITSN2Q9NZM3 1697 aa11.36□□□□□ -0.59
AP003481.1-202ENST00000608214 FMN1Q68DA7 1419 aa11.36□□□□□ -0.59
AP003481.1-202ENST00000608214 LRRIQ1Q96JM4 1722 aa11.36□□□□□ -0.59
AP003481.1-202ENST00000608214 PCGF6Q9BYE7 350 aa11.36□□□□□ -0.59
AP003481.1-202ENST00000608214 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
AP003481.1-202ENST00000608214 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
AP003481.1-202ENST00000608214 PREX2Q70Z35 1606 aa11.35□□□□□ -0.59
AP003481.1-202ENST00000608214 UBAP1LF5GYI3 381 aa11.35□□□□□ -0.59
AP003481.1-202ENST00000608214 ESF1Q9H501 851 aaKnown RBP11.35□□□□□ -0.59
AP003481.1-202ENST00000608214 MYT1LQ9UL68 1186 aa11.35□□□□□ -0.59
AP003481.1-202ENST00000608214 ZNF142P52746 1687 aaPredicted RBP11.34□□□□□ -0.59
AP003481.1-202ENST00000608214 PLA2R1Q13018 1463 aa11.34□□□□□ -0.59
AP003481.1-202ENST00000608214 TCOF1Q13428 1488 aaKnown RBP11.34□□□□□ -0.59
AP003481.1-202ENST00000608214 ARHGAP35Q9NRY4 1499 aa11.34□□□□□ -0.59
AP003481.1-202ENST00000608214 ZMYM3Q14202 1370 aa11.33□□□□□ -0.6
AP003481.1-202ENST00000608214 LHX8Q68G74 356 aa11.33□□□□□ -0.6
AP003481.1-202ENST00000608214 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
AP003481.1-202ENST00000608214 CLIP1P30622 1438 aa11.33□□□□□ -0.6
AP003481.1-202ENST00000608214 MED1Q15648 1581 aaPredicted RBP11.33□□□□□ -0.6
AP003481.1-202ENST00000608214 MYO3AQ8NEV4 1616 aa11.32□□□□□ -0.6
AP003481.1-202ENST00000608214 PKD2Q13563 968 aa11.31□□□□□ -0.6
AP003481.1-202ENST00000608214 SAMD9LQ8IVG5 1584 aa11.31□□□□□ -0.6
AP003481.1-202ENST00000608214 CEP170BQ9Y4F5 1589 aaPredicted RBP11.31□□□□□ -0.6
AP003481.1-202ENST00000608214 CDC42BPAQ5VT25 1732 aa11.3□□□□□ -0.6
AP003481.1-202ENST00000608214 CLTCQ00610 1675 aaKnown RBP11.3□□□□□ -0.6
AP003481.1-202ENST00000608214 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
AP003481.1-202ENST00000608214 PTPRKQ15262 1439 aa11.29□□□□□ -0.6
AP003481.1-202ENST00000608214 HSPA1LP34931 641 aa11.29□□□□□ -0.6
AP003481.1-202ENST00000608214 PLXNC1O60486 1568 aa11.28□□□□□ -0.6
AP003481.1-202ENST00000608214 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
AP003481.1-202ENST00000608214 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
AP003481.1-202ENST00000608214 ZEB1P37275 1124 aaPredicted RBP11.25□□□□□ -0.61
AP003481.1-202ENST00000608214 SYCP2Q9BX26 1530 aa11.25□□□□□ -0.61
AP003481.1-202ENST00000608214 NEURL4Q96JN8 1562 aa11.24□□□□□ -0.61
AP003481.1-202ENST00000608214 INO80Q9ULG1 1556 aaPredicted RBP11.24□□□□□ -0.61
AP003481.1-202ENST00000608214 DNMT1P26358 1616 aaKnown RBP11.24□□□□□ -0.61
AP003481.1-202ENST00000608214 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
AP003481.1-202ENST00000608214 CPS1P31327 1500 aa11.24□□□□□ -0.61
AP003481.1-202ENST00000608214 ATP7AQ04656 1500 aa11.24□□□□□ -0.61
AP003481.1-202ENST00000608214 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
AP003481.1-202ENST00000608214 PIP4K2BP78356 416 aa11.23□□□□□ -0.61
AP003481.1-202ENST00000608214 SPAG9O60271 1321 aaKnown RBP11.23□□□□□ -0.61
AP003481.1-202ENST00000608214 A2ML1A8K2U0 1454 aa11.23□□□□□ -0.61
AP003481.1-202ENST00000608214 A2MP01023 1474 aa11.23□□□□□ -0.61
AP003481.1-202ENST00000608214 CCDC18Q5T9S5 1454 aa11.23□□□□□ -0.61
AP003481.1-202ENST00000608214 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
AP003481.1-202ENST00000608214 TOM1O60784 492 aa11.22□□□□□ -0.61
AP003481.1-202ENST00000608214 CLCN6P51797 869 aa11.22□□□□□ -0.61
AP003481.1-202ENST00000608214 CASKIN1Q8WXD9 1431 aa11.22□□□□□ -0.61
AP003481.1-202ENST00000608214 GPATCH8Q9UKJ3 1502 aaKnown RBP11.22□□□□□ -0.61
AP003481.1-202ENST00000608214 SHANK2Q9UPX8 1470 aa11.22□□□□□ -0.61
AP003481.1-202ENST00000608214 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.61
AP003481.1-202ENST00000608214 HNRNPMP52272 730 aaKnown RBP eCLIP11.21□□□□□ -0.61
AP003481.1-202ENST00000608214 ZNF777Q9ULD5 760 aaPredicted RBP11.2□□□□□ -0.62
AP003481.1-202ENST00000608214 VWDEQ8N2E2 1590 aa11.2□□□□□ -0.62
AP003481.1-202ENST00000608214 GGT6Q6P531 493 aa11.19□□□□□ -0.62
AP003481.1-202ENST00000608214 EHMT2Q96KQ7 1210 aa11.19□□□□□ -0.62
AP003481.1-202ENST00000608214 ADGBQ8N7X0 1667 aa11.18□□□□□ -0.62
AP003481.1-202ENST00000608214 PLEKHH2Q8IVE3 1493 aa11.17□□□□□ -0.62
AP003481.1-202ENST00000608214 POTEIP0CG38 1075 aa11.16□□□□□ -0.62
AP003481.1-202ENST00000608214 MED14O60244 1454 aa11.15□□□□□ -0.62
AP003481.1-202ENST00000608214 FYCO1Q9BQS8 1478 aa11.15□□□□□ -0.62
AP003481.1-202ENST00000608214 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
AP003481.1-202ENST00000608214 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
AP003481.1-202ENST00000608214 STRCP1A6NGW2 1772 aa11.15□□□□□ -0.62
AP003481.1-202ENST00000608214 TNRQ92752 1358 aa11.15□□□□□ -0.63
AP003481.1-202ENST00000608214 PZPP20742 1482 aa11.14□□□□□ -0.63
AP003481.1-202ENST00000608214 DEPDC5O75140 1603 aa11.14□□□□□ -0.63
AP003481.1-202ENST00000608214 FBXO31Q5XUX0 539 aaPredicted RBP11.14□□□□□ -0.63
AP003481.1-202ENST00000608214 CFDP1Q9UEE9 299 aaPredicted RBP11.13□□□□□ -0.63
AP003481.1-202ENST00000608214 RGS17Q9UGC6 210 aaPredicted RBP11.13□□□□□ -0.63
AP003481.1-202ENST00000608214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.13□□□□□ -0.63
AP003481.1-202ENST00000608214 MBD5Q9P267 1494 aa11.12□□□□□ -0.63
AP003481.1-202ENST00000608214 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
AP003481.1-202ENST00000608214 ANKLE2Q86XL3 938 aa11.12□□□□□ -0.63
AP003481.1-202ENST00000608214 LRRC7Q96NW7 1537 aa11.12□□□□□ -0.63
AP003481.1-202ENST00000608214 DHX29Q7Z478 1369 aaKnown RBP11.12□□□□□ -0.63
AP003481.1-202ENST00000608214 RTEL1-TNFRSF6BF6WH68 1400 aa11.11□□□□□ -0.63
AP003481.1-202ENST00000608214 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
AP003481.1-202ENST00000608214 FAM135AQ9P2D6 1515 aa11.11□□□□□ -0.63
AP003481.1-202ENST00000608214 IQGAP1P46940 1657 aa11.11□□□□□ -0.63
AP003481.1-202ENST00000608214 RNF17Q9BXT8 1623 aaKnown RBP11.1□□□□□ -0.63
AP003481.1-202ENST00000608214 THEMISQ8N1K5 641 aaPredicted RBP11.1□□□□□ -0.63
AP003481.1-202ENST00000608214 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
AP003481.1-202ENST00000608214 NLRP1Q9C000 1473 aa11.1□□□□□ -0.63
AP003481.1-202ENST00000608214 UGGT1Q9NYU2 1555 aa11.1□□□□□ -0.63
AP003481.1-202ENST00000608214 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
AP003481.1-202ENST00000608214 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
AP003481.1-202ENST00000608214 SYNMO15061 1565 aa11.09□□□□□ -0.63
AP003481.1-202ENST00000608214 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
AP003481.1-202ENST00000608214 ZC3H13Q5T200 1668 aaKnown RBP11.08□□□□□ -0.64
AP003481.1-202ENST00000608214 KIF3BO15066 747 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms