RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 NYAP1Q6ZVC0 841 aa10.93□□□□□ -0.66
RNU4-89P-201ENST00000607443 DDX27Q96GQ7 796 aaKnown RBP10.92□□□□□ -0.66
RNU4-89P-201ENST00000607443 KCNC4Q03721 635 aa10.91□□□□□ -0.66
RNU4-89P-201ENST00000607443 ZFRQ96KR1 1074 aaKnown RBP10.91□□□□□ -0.66
RNU4-89P-201ENST00000607443 KIAA1468Q9P260 1216 aa10.91□□□□□ -0.66
RNU4-89P-201ENST00000607443 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
RNU4-89P-201ENST00000607443 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
RNU4-89P-201ENST00000607443 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
RNU4-89P-201ENST00000607443 ONECUT3O60422 494 aaPredicted RBP10.88□□□□□ -0.67
RNU4-89P-201ENST00000607443 MFSD10Q14728 455 aa10.88□□□□□ -0.67
RNU4-89P-201ENST00000607443 TYW1BQ6NUM6 668 aa10.88□□□□□ -0.67
RNU4-89P-201ENST00000607443 PHF14O94880 888 aa10.87□□□□□ -0.67
RNU4-89P-201ENST00000607443 LAPTM4AQ15012 233 aa10.85□□□□□ -0.67
RNU4-89P-201ENST00000607443 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
RNU4-89P-201ENST00000607443 SEPT9Q9UHD8 586 aaPredicted RBP10.83□□□□□ -0.68
RNU4-89P-201ENST00000607443 LCE2BO14633 110 aa10.81□□□□□ -0.68
RNU4-89P-201ENST00000607443 C6orf132Q5T0Z8 1188 aa10.81□□□□□ -0.68
RNU4-89P-201ENST00000607443 TSR3Q9UJK0 312 aaKnown RBP10.81□□□□□ -0.68
RNU4-89P-201ENST00000607443 TRAF7Q6Q0C0 670 aa10.8□□□□□ -0.68
RNU4-89P-201ENST00000607443 FAM98CQ17RN3 349 aaKnown RBP10.79□□□□□ -0.68
RNU4-89P-201ENST00000607443 EPAS1Q99814 870 aa10.79□□□□□ -0.68
RNU4-89P-201ENST00000607443 TRIM6-TRIM34B2RNG4 842 aa10.78□□□□□ -0.68
RNU4-89P-201ENST00000607443 GFRA3O60609 400 aa10.78□□□□□ -0.68
RNU4-89P-201ENST00000607443 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.78□□□□□ -0.68
RNU4-89P-201ENST00000607443 HPS5Q9UPZ3 1129 aa10.78□□□□□ -0.68
RNU4-89P-201ENST00000607443 LRCH3Q96II8 777 aa10.77□□□□□ -0.69
RNU4-89P-201ENST00000607443 RBM33Q96EV2 1170 aaKnown RBP10.71□□□□□ -0.69
RNU4-89P-201ENST00000607443 PPP4CP60510 307 aa10.7□□□□□ -0.7
RNU4-89P-201ENST00000607443 CAMK2BQ13554 666 aa10.69□□□□□ -0.7
RNU4-89P-201ENST00000607443 TJAP1Q5JTD0 557 aa10.69□□□□□ -0.7
RNU4-89P-201ENST00000607443 CADPS2Q86UW7 1296 aa10.69□□□□□ -0.7
RNU4-89P-201ENST00000607443 PRKD2Q9BZL6 878 aa10.69□□□□□ -0.7
RNU4-89P-201ENST00000607443 NRG2O14511 850 aaPredicted RBP10.68□□□□□ -0.7
RNU4-89P-201ENST00000607443 PACS2Q86VP3 889 aa10.68□□□□□ -0.7
RNU4-89P-201ENST00000607443 DPYSL4O14531 572 aa10.67□□□□□ -0.7
RNU4-89P-201ENST00000607443 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
RNU4-89P-201ENST00000607443 DDX12PQ92771 950 aa10.65□□□□□ -0.7
RNU4-89P-201ENST00000607443 PPP1R18Q6NYC8 613 aa10.63□□□□□ -0.71
RNU4-89P-201ENST00000607443 V9GY48 417 aaPredicted RBP10.63□□□□□ -0.71
RNU4-89P-201ENST00000607443 TSR1Q2NL82 804 aaKnown RBP10.61□□□□□ -0.71
RNU4-89P-201ENST00000607443 SAMD7Q7Z3H4 446 aa10.61□□□□□ -0.71
RNU4-89P-201ENST00000607443 MTRQ99707 1265 aa10.61□□□□□ -0.71
RNU4-89P-201ENST00000607443 IL21Q9HBE4 155 aa10.61□□□□□ -0.71
RNU4-89P-201ENST00000607443 EN1Q05925 392 aaPredicted RBP10.6□□□□□ -0.71
RNU4-89P-201ENST00000607443 MAP3K7O43318 606 aa10.59□□□□□ -0.71
RNU4-89P-201ENST00000607443 ZNF787Q6DD87 383 aa10.59□□□□□ -0.71
RNU4-89P-201ENST00000607443 SMAPO00193 183 aa10.58□□□□□ -0.72
RNU4-89P-201ENST00000607443 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.58□□□□□ -0.72
RNU4-89P-201ENST00000607443 NBR1Q14596 966 aa10.57□□□□□ -0.72
RNU4-89P-201ENST00000607443 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
RNU4-89P-201ENST00000607443 ZNF516Q92618 1163 aa10.56□□□□□ -0.72
RNU4-89P-201ENST00000607443 FAM198AQ9UFP1 575 aa10.56□□□□□ -0.72
RNU4-89P-201ENST00000607443 PRSS12P56730 875 aa10.55□□□□□ -0.72
RNU4-89P-201ENST00000607443 PDZRN3Q9UPQ7 1066 aa10.55□□□□□ -0.72
RNU4-89P-201ENST00000607443 C3orf80F5H4A9 247 aa10.53□□□□□ -0.72
RNU4-89P-201ENST00000607443 TATDN2Q93075 761 aa10.52□□□□□ -0.73
RNU4-89P-201ENST00000607443 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
RNU4-89P-201ENST00000607443 APLP1P51693 650 aa10.5□□□□□ -0.73
RNU4-89P-201ENST00000607443 PDIA6Q15084 440 aa10.5□□□□□ -0.73
RNU4-89P-201ENST00000607443 NKX2-3Q8TAU0 364 aa10.5□□□□□ -0.73
RNU4-89P-201ENST00000607443 CERKQ8TCT0 537 aa10.5□□□□□ -0.73
RNU4-89P-201ENST00000607443 ZNF775Q96BV0 537 aaPredicted RBP10.5□□□□□ -0.73
RNU4-89P-201ENST00000607443 NBPF26B4DH59 902 aa10.49□□□□□ -0.73
RNU4-89P-201ENST00000607443 SPDYE16A6NNV3 312 aaPredicted RBP10.48□□□□□ -0.73
RNU4-89P-201ENST00000607443 HDGFP51858 240 aaKnown RBP10.48□□□□□ -0.73
RNU4-89P-201ENST00000607443 GGCXP38435 758 aa10.46□□□□□ -0.73
RNU4-89P-201ENST00000607443 RNF40O75150 1001 aa10.45□□□□□ -0.74
RNU4-89P-201ENST00000607443 PRIM1P49642 420 aaKnown RBP10.45□□□□□ -0.74
RNU4-89P-201ENST00000607443 NUDT18Q6ZVK8 323 aa10.45□□□□□ -0.74
RNU4-89P-201ENST00000607443 TMUB1Q9BVT8 246 aa10.45□□□□□ -0.74
RNU4-89P-201ENST00000607443 DCAF8L2P0C7V8 631 aa10.44□□□□□ -0.74
RNU4-89P-201ENST00000607443 COPS2P61201 443 aa10.41□□□□□ -0.74
RNU4-89P-201ENST00000607443 NECTIN2Q92692 538 aa10.41□□□□□ -0.74
RNU4-89P-201ENST00000607443 RBM27Q9P2N5 1060 aaKnown RBP10.4□□□□□ -0.74
RNU4-89P-201ENST00000607443 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
RNU4-89P-201ENST00000607443 TRIM67Q6ZTA4 783 aa10.39□□□□□ -0.75
RNU4-89P-201ENST00000607443 ZPR1O75312 459 aa10.38□□□□□ -0.75
RNU4-89P-201ENST00000607443 SWT1Q5T5J6 900 aaKnown RBP10.37□□□□□ -0.75
RNU4-89P-201ENST00000607443 SLF2Q8IX21 1173 aa10.37□□□□□ -0.75
RNU4-89P-201ENST00000607443 CDHR5Q9HBB8 845 aa10.37□□□□□ -0.75
RNU4-89P-201ENST00000607443 OSBPP22059 807 aa10.36□□□□□ -0.75
RNU4-89P-201ENST00000607443 SLC19A1P41440 591 aa10.36□□□□□ -0.75
RNU4-89P-201ENST00000607443 MYT1Q01538 1121 aa10.35□□□□□ -0.75
RNU4-89P-201ENST00000607443 TTC13Q8NBP0 860 aa10.35□□□□□ -0.75
RNU4-89P-201ENST00000607443 EMID1Q96A84 441 aaPredicted RBP10.35□□□□□ -0.75
RNU4-89P-201ENST00000607443 DGAT1O75907 488 aa10.34□□□□□ -0.75
RNU4-89P-201ENST00000607443 PKDCCQ504Y2 493 aa10.34□□□□□ -0.75
RNU4-89P-201ENST00000607443 ARIH1Q9Y4X5 557 aaPredicted RBP10.34□□□□□ -0.75
RNU4-89P-201ENST00000607443 RNF223E7ERA6 249 aa10.33□□□□□ -0.76
RNU4-89P-201ENST00000607443 POTECB2RU33 542 aa10.32□□□□□ -0.76
RNU4-89P-201ENST00000607443 E2F4Q16254 413 aa10.32□□□□□ -0.76
RNU4-89P-201ENST00000607443 SPRYD7Q5W111 196 aa10.31□□□□□ -0.76
RNU4-89P-201ENST00000607443 PRR20EP86478 221 aa10.3□□□□□ -0.76
RNU4-89P-201ENST00000607443 PRR20CP86479 221 aa10.3□□□□□ -0.76
RNU4-89P-201ENST00000607443 PRR20DP86480 221 aa10.3□□□□□ -0.76
RNU4-89P-201ENST00000607443 PRR20BP86481 221 aa10.3□□□□□ -0.76
RNU4-89P-201ENST00000607443 PRR20AP86496 221 aa10.3□□□□□ -0.76
RNU4-89P-201ENST00000607443 PADI6Q6TGC4 694 aa10.3□□□□□ -0.76
RNU4-89P-201ENST00000607443 ZNF598Q86UK7 904 aaKnown RBP10.3□□□□□ -0.76
RNU4-89P-201ENST00000607443 NPDC1Q9NQX5 325 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms