RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
MSH6-212ENST00000607272 ITSN2Q9NZM3 1697 aa16.66■□□□□ 0.26
MSH6-212ENST00000607272 GPATCH8Q9UKJ3 1502 aaKnown RBP16.66■□□□□ 0.26
MSH6-212ENST00000607272 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
MSH6-212ENST00000607272 ANKRD50Q9ULJ7 1429 aa16.65■□□□□ 0.26
MSH6-212ENST00000607272 PDE3BQ13370 1112 aa16.65■□□□□ 0.26
MSH6-212ENST00000607272 TPRNQ4KMQ1 711 aa16.64■□□□□ 0.25
MSH6-212ENST00000607272 RCAN3Q9UKA8 241 aa16.64■□□□□ 0.25
MSH6-212ENST00000607272 ST20-MTHFSA0A0A6YYL1 179 aa16.62■□□□□ 0.25
MSH6-212ENST00000607272 CROCC2H7BZ55 1655 aa16.62■□□□□ 0.25
MSH6-212ENST00000607272 MS4A1P11836 297 aa16.62■□□□□ 0.25
MSH6-212ENST00000607272 ZNF777Q9ULD5 760 aaPredicted RBP16.62■□□□□ 0.25
MSH6-212ENST00000607272 NUP155O75694 1391 aa16.61■□□□□ 0.25
MSH6-212ENST00000607272 EXOC6Q8TAG9 804 aa16.61■□□□□ 0.25
MSH6-212ENST00000607272 SENP3-EIF4A1A0A087X0R7 540 aa16.6■□□□□ 0.25
MSH6-212ENST00000607272 NLRP13Q86W25 1043 aa16.6■□□□□ 0.25
MSH6-212ENST00000607272 ADCY10Q96PN6 1610 aa16.59■□□□□ 0.25
MSH6-212ENST00000607272 MRC2Q9UBG0 1479 aa16.58■□□□□ 0.25
MSH6-212ENST00000607272 PDE4AP27815 886 aa16.58■□□□□ 0.25
MSH6-212ENST00000607272 USP35Q9P2H5 1018 aa16.58■□□□□ 0.25
MSH6-212ENST00000607272 SHANK2Q9UPX8 1470 aa16.57■□□□□ 0.24
MSH6-212ENST00000607272 IFT140Q96RY7 1462 aa16.57■□□□□ 0.24
MSH6-212ENST00000607272 KDM5DQ9BY66 1539 aa16.57■□□□□ 0.24
MSH6-212ENST00000607272 BACH2Q9BYV9 841 aa16.57■□□□□ 0.24
MSH6-212ENST00000607272 PARD3Q8TEW0 1356 aa16.56■□□□□ 0.24
MSH6-212ENST00000607272 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
MSH6-212ENST00000607272 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
MSH6-212ENST00000607272 GRIN2AQ12879 1464 aa16.55■□□□□ 0.24
MSH6-212ENST00000607272 E9PCH4 1651 aa16.55■□□□□ 0.24
MSH6-212ENST00000607272 INSRP06213 1382 aa16.55■□□□□ 0.24
MSH6-212ENST00000607272 C9orf84Q5VXU9 1444 aa16.55■□□□□ 0.24
MSH6-212ENST00000607272 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
MSH6-212ENST00000607272 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
MSH6-212ENST00000607272 TSPY4P0CV99 314 aa16.53■□□□□ 0.24
MSH6-212ENST00000607272 TSPY10P0CW01 314 aa16.53■□□□□ 0.24
MSH6-212ENST00000607272 CEP170Q5SW79 1584 aa16.53■□□□□ 0.24
MSH6-212ENST00000607272 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.24
MSH6-212ENST00000607272 ZNF608Q9ULD9 1512 aaPredicted RBP16.52■□□□□ 0.24
MSH6-212ENST00000607272 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
MSH6-212ENST00000607272 PTPRGP23470 1445 aa16.52■□□□□ 0.24
MSH6-212ENST00000607272 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
MSH6-212ENST00000607272 ZMYM4Q5VZL5 1548 aa16.51■□□□□ 0.23
MSH6-212ENST00000607272 PLEKHD1A6NEE1 506 aa16.5■□□□□ 0.23
MSH6-212ENST00000607272 PER1O15534 1290 aaPredicted RBP16.5■□□□□ 0.23
MSH6-212ENST00000607272 SALL2Q9Y467 1007 aaPredicted RBP16.5■□□□□ 0.23
MSH6-212ENST00000607272 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
MSH6-212ENST00000607272 NEFMP07197 916 aa16.49■□□□□ 0.23
MSH6-212ENST00000607272 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
MSH6-212ENST00000607272 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
MSH6-212ENST00000607272 PRAG1Q86YV5 1406 aa16.47■□□□□ 0.23
MSH6-212ENST00000607272 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
MSH6-212ENST00000607272 ABCC10Q5T3U5 1492 aa16.46■□□□□ 0.23
MSH6-212ENST00000607272 CDC42BPAQ5VT25 1732 aa16.46■□□□□ 0.23
MSH6-212ENST00000607272 BLMP54132 1417 aaPredicted RBP16.45■□□□□ 0.22
MSH6-212ENST00000607272 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
MSH6-212ENST00000607272 GPRASP1Q5JY77 1395 aa16.45■□□□□ 0.22
MSH6-212ENST00000607272 PLEKHH2Q8IVE3 1493 aa16.45■□□□□ 0.22
MSH6-212ENST00000607272 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
MSH6-212ENST00000607272 CCDC144AA2RUR9 1427 aa16.43■□□□□ 0.22
MSH6-212ENST00000607272 TRPM1Q7Z4N2 1603 aa16.42■□□□□ 0.22
MSH6-212ENST00000607272 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
MSH6-212ENST00000607272 ARHGEF5Q12774 1597 aa16.42■□□□□ 0.22
MSH6-212ENST00000607272 COL17A1Q9UMD9 1497 aaPredicted RBP16.42■□□□□ 0.22
MSH6-212ENST00000607272 PLIN1O60240 522 aa16.41■□□□□ 0.22
MSH6-212ENST00000607272 CRBNQ96SW2 442 aa16.41■□□□□ 0.22
MSH6-212ENST00000607272 FAM135AQ9P2D6 1515 aa16.41■□□□□ 0.22
MSH6-212ENST00000607272 RSPH4AQ5TD94 716 aa16.41■□□□□ 0.22
MSH6-212ENST00000607272 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
MSH6-212ENST00000607272 HNRNPMP52272 730 aaKnown RBP eCLIP16.39■□□□□ 0.22
MSH6-212ENST00000607272 NBPF1Q3BBV0 1214 aa16.39■□□□□ 0.22
MSH6-212ENST00000607272 CC2D1BQ5T0F9 858 aaKnown RBP16.39■□□□□ 0.22
MSH6-212ENST00000607272 TESK2Q96S53 571 aa16.39■□□□□ 0.22
MSH6-212ENST00000607272 EIF4G3O43432 1585 aaKnown RBP16.39■□□□□ 0.21
MSH6-212ENST00000607272 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
MSH6-212ENST00000607272 LAMC1P11047 1609 aa16.39■□□□□ 0.21
MSH6-212ENST00000607272 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
MSH6-212ENST00000607272 ATP10BO94823 1461 aa16.39■□□□□ 0.21
MSH6-212ENST00000607272 PANK3Q9H999 370 aa16.38■□□□□ 0.21
MSH6-212ENST00000607272 ABCA8O94911 1581 aa16.37■□□□□ 0.21
MSH6-212ENST00000607272 TMF1P82094 1093 aa16.37■□□□□ 0.21
MSH6-212ENST00000607272 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
MSH6-212ENST00000607272 PRDM15P57071 1507 aaPredicted RBP16.36■□□□□ 0.21
MSH6-212ENST00000607272 CCDC141Q6ZP82 1450 aa16.36■□□□□ 0.21
MSH6-212ENST00000607272 ERBINQ96RT1 1412 aa16.36■□□□□ 0.21
MSH6-212ENST00000607272 DISP3Q9P2K9 1392 aa16.36■□□□□ 0.21
MSH6-212ENST00000607272 RGL3Q3MIN7 710 aa16.36■□□□□ 0.21
MSH6-212ENST00000607272 CENPQQ7L2Z9 268 aaPredicted RBP16.36■□□□□ 0.21
MSH6-212ENST00000607272 KDM2BQ8NHM5 1336 aa16.35■□□□□ 0.21
MSH6-212ENST00000607272 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
MSH6-212ENST00000607272 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
MSH6-212ENST00000607272 NUP160Q12769 1436 aa16.34■□□□□ 0.21
MSH6-212ENST00000607272 A2MP01023 1474 aa16.34■□□□□ 0.21
MSH6-212ENST00000607272 PLA2R1Q13018 1463 aa16.33■□□□□ 0.2
MSH6-212ENST00000607272 EIF2AK4Q9P2K8 1649 aaKnown RBP16.32■□□□□ 0.2
MSH6-212ENST00000607272 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
MSH6-212ENST00000607272 ADAMTS8Q9UP79 889 aa16.32■□□□□ 0.2
MSH6-212ENST00000607272 GSE1Q14687 1217 aa16.31■□□□□ 0.2
MSH6-212ENST00000607272 FBLN2P98095 1184 aa16.31■□□□□ 0.2
MSH6-212ENST00000607272 FAM161AQ3B820 660 aa16.31■□□□□ 0.2
MSH6-212ENST00000607272 C20orf194Q5TEA3 1177 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms