RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 NUTM2FA1L443 756 aa3.82□□□□□ -1.8
SNORA28-201ENST00000606769 RIMBP2O15034 1052 aa3.82□□□□□ -1.8
SNORA28-201ENST00000606769 SNPHO15079 494 aa3.82□□□□□ -1.8
SNORA28-201ENST00000606769 BRPF1P55201 1214 aaPredicted RBP3.82□□□□□ -1.8
SNORA28-201ENST00000606769 C6orf132Q5T0Z8 1188 aa3.82□□□□□ -1.8
SNORA28-201ENST00000606769 TULP1O00294 542 aaPredicted RBP3.81□□□□□ -1.8
SNORA28-201ENST00000606769 GNPATO15228 680 aa3.81□□□□□ -1.8
SNORA28-201ENST00000606769 MAP3K7O43318 606 aa3.81□□□□□ -1.8
SNORA28-201ENST00000606769 HIC1Q14526 733 aa3.81□□□□□ -1.8
SNORA28-201ENST00000606769 FBXW7Q969H0 707 aa3.81□□□□□ -1.8
SNORA28-201ENST00000606769 MARVELD3Q96A59 401 aa3.81□□□□□ -1.8
SNORA28-201ENST00000606769 PHOX2BQ99453 314 aa3.81□□□□□ -1.8
SNORA28-201ENST00000606769 BCL2L12Q9HB09 334 aa3.81□□□□□ -1.8
SNORA28-201ENST00000606769 IRF6O14896 467 aa3.8□□□□□ -1.8
SNORA28-201ENST00000606769 TRIM66O15016 1216 aa3.8□□□□□ -1.8
SNORA28-201ENST00000606769 FCHSD2O94868 740 aa3.8□□□□□ -1.8
SNORA28-201ENST00000606769 FAM161AQ3B820 660 aa3.8□□□□□ -1.8
SNORA28-201ENST00000606769 MAP2K5Q13163 448 aa3.79□□□□□ -1.8
SNORA28-201ENST00000606769 VARS2Q5ST30 1063 aaKnown RBP3.79□□□□□ -1.8
SNORA28-201ENST00000606769 PADI6Q6TGC4 694 aa3.79□□□□□ -1.8
SNORA28-201ENST00000606769 CCDC102AQ96A19 550 aa3.79□□□□□ -1.8
SNORA28-201ENST00000606769 FAM163AQ96GL9 167 aaPredicted RBP3.79□□□□□ -1.8
SNORA28-201ENST00000606769 REPIN1Q9BWE0 567 aaKnown RBP3.79□□□□□ -1.8
SNORA28-201ENST00000606769 TSKSQ9UJT2 592 aa3.79□□□□□ -1.8
SNORA28-201ENST00000606769 MINK1Q8N4C8 1332 aaPredicted RBP3.78□□□□□ -1.8
SNORA28-201ENST00000606769 PSEN2P49810 448 aa3.78□□□□□ -1.8
SNORA28-201ENST00000606769 PPP4R3BQ5MIZ7 849 aa3.78□□□□□ -1.8
SNORA28-201ENST00000606769 DMRTA1Q5VZB9 504 aa3.78□□□□□ -1.8
SNORA28-201ENST00000606769 AK7Q96M32 723 aa3.78□□□□□ -1.8
SNORA28-201ENST00000606769 TMUB1Q9BVT8 246 aa3.78□□□□□ -1.8
SNORA28-201ENST00000606769 GPBP1L1Q9HC44 474 aaPredicted RBP3.78□□□□□ -1.8
SNORA28-201ENST00000606769 AXIN2Q9Y2T1 843 aa3.78□□□□□ -1.8
SNORA28-201ENST00000606769 ADGRG1Q9Y653 693 aa3.78□□□□□ -1.8
SNORA28-201ENST00000606769 FAM205CA6NFA0 338 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 PPP1R3GB7ZBB8 358 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 EMP3P54852 163 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 PRSS12P56730 875 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 PDE4DQ08499 809 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 PROX2Q3B8N5 592 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 NLRP7Q8WX94 980 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 CDCA7LQ96GN5 454 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 HS3ST6Q96QI5 342 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 ZBED2Q9BTP6 218 aa3.77□□□□□ -1.81
SNORA28-201ENST00000606769 PSDA5PKW4 1024 aaPredicted RBP3.76□□□□□ -1.81
SNORA28-201ENST00000606769 AMHR2Q16671 573 aa3.76□□□□□ -1.81
SNORA28-201ENST00000606769 METTL3Q86U44 580 aaKnown RBP3.76□□□□□ -1.81
SNORA28-201ENST00000606769 PARP9Q8IXQ6 854 aa3.76□□□□□ -1.81
SNORA28-201ENST00000606769 ZNF687Q8N1G0 1237 aa3.76□□□□□ -1.81
SNORA28-201ENST00000606769 KCNK17Q96T54 332 aa3.76□□□□□ -1.81
SNORA28-201ENST00000606769 EYA1Q99502 592 aa3.76□□□□□ -1.81
SNORA28-201ENST00000606769 RBM27Q9P2N5 1060 aaKnown RBP3.76□□□□□ -1.81
SNORA28-201ENST00000606769 ERBB3P21860 1342 aa3.75□□□□□ -1.81
SNORA28-201ENST00000606769 PTPREP23469 700 aa3.75□□□□□ -1.81
SNORA28-201ENST00000606769 KRI1Q8N9T8 703 aaKnown RBP3.75□□□□□ -1.81
SNORA28-201ENST00000606769 PXYLP1Q8TE99 480 aa3.75□□□□□ -1.81
SNORA28-201ENST00000606769 KRTAP3-3Q9BYR6 98 aa3.75□□□□□ -1.81
SNORA28-201ENST00000606769 KRTAP3-2Q9BYR7 98 aa3.75□□□□□ -1.81
SNORA28-201ENST00000606769 TRIM6-TRIM34B2RNG4 842 aa3.74□□□□□ -1.81
SNORA28-201ENST00000606769 ARHGAP33O14559 1287 aa3.74□□□□□ -1.81
SNORA28-201ENST00000606769 MS4A1P11836 297 aa3.74□□□□□ -1.81
SNORA28-201ENST00000606769 CERKQ8TCT0 537 aa3.74□□□□□ -1.81
SNORA28-201ENST00000606769 KDM4CQ9H3R0 1056 aa3.74□□□□□ -1.81
SNORA28-201ENST00000606769 PLEKHG3A1L390 1219 aa3.73□□□□□ -1.81
SNORA28-201ENST00000606769 BHMG1C9JSJ3 638 aaPredicted RBP3.73□□□□□ -1.81
SNORA28-201ENST00000606769 SMAPO00193 183 aa3.73□□□□□ -1.81
SNORA28-201ENST00000606769 NEUROD2Q15784 382 aa3.73□□□□□ -1.81
SNORA28-201ENST00000606769 SLC4A5Q9BY07 1137 aa3.73□□□□□ -1.81
SNORA28-201ENST00000606769 VPS9D1Q9Y2B5 631 aa3.73□□□□□ -1.81
SNORA28-201ENST00000606769 HRO43593 1189 aa3.72□□□□□ -1.81
SNORA28-201ENST00000606769 ONECUT3O60422 494 aaPredicted RBP3.72□□□□□ -1.81
SNORA28-201ENST00000606769 MDM2Q00987 491 aaPredicted RBP3.72□□□□□ -1.81
SNORA28-201ENST00000606769 NUDT18Q6ZVK8 323 aa3.72□□□□□ -1.81
SNORA28-201ENST00000606769 TATDN2Q93075 761 aa3.72□□□□□ -1.81
SNORA28-201ENST00000606769 FAM117AQ9C073 453 aa3.72□□□□□ -1.81
SNORA28-201ENST00000606769 KIAA1468Q9P260 1216 aa3.72□□□□□ -1.81
SNORA28-201ENST00000606769 RCCD1A6NED2 376 aa3.71□□□□□ -1.82
SNORA28-201ENST00000606769 PBX2P40425 430 aa3.71□□□□□ -1.82
SNORA28-201ENST00000606769 GIGYF2Q6Y7W6 1299 aaKnown RBP3.71□□□□□ -1.82
SNORA28-201ENST00000606769 OATP04181 439 aa3.7□□□□□ -1.82
SNORA28-201ENST00000606769 LSM11P83369 360 aaKnown RBP eCLIP3.7□□□□□ -1.82
SNORA28-201ENST00000606769 TMEM134Q9H6X4 195 aa3.7□□□□□ -1.82
SNORA28-201ENST00000606769 FAM217BQ9NTX9 383 aaPredicted RBP3.7□□□□□ -1.82
SNORA28-201ENST00000606769 SEPT9Q9UHD8 586 aaPredicted RBP3.7□□□□□ -1.82
SNORA28-201ENST00000606769 RABGEF1Q9UJ41 708 aa3.7□□□□□ -1.82
SNORA28-201ENST00000606769 PNMA3Q9UL41 463 aa3.7□□□□□ -1.82
SNORA28-201ENST00000606769 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.69□□□□□ -1.82
SNORA28-201ENST00000606769 TK2O00142 265 aa3.69□□□□□ -1.82
SNORA28-201ENST00000606769 TMEM132AQ24JP5 1023 aa3.69□□□□□ -1.82
SNORA28-201ENST00000606769 FBXO31Q5XUX0 539 aaPredicted RBP3.69□□□□□ -1.82
SNORA28-201ENST00000606769 ADGRD1Q6QNK2 874 aa3.69□□□□□ -1.82
SNORA28-201ENST00000606769 POTEGQ6S5H5 508 aa3.69□□□□□ -1.82
SNORA28-201ENST00000606769 IL27Q8NEV9 243 aa3.69□□□□□ -1.82
SNORA28-201ENST00000606769 GPCPD1Q9NPB8 672 aa3.69□□□□□ -1.82
SNORA28-201ENST00000606769 NBPF26B4DH59 902 aa3.68□□□□□ -1.82
SNORA28-201ENST00000606769 SLC10A3P09131 477 aa3.68□□□□□ -1.82
SNORA28-201ENST00000606769 SSTR3P32745 418 aaPredicted RBP3.68□□□□□ -1.82
SNORA28-201ENST00000606769 PACS2Q86VP3 889 aa3.68□□□□□ -1.82
SNORA28-201ENST00000606769 RBM46Q8TBY0 533 aaKnown RBP3.68□□□□□ -1.82
SNORA28-201ENST00000606769 DAXXQ9UER7 740 aaPredicted RBP3.68□□□□□ -1.82
SNORA28-201ENST00000606769 POTEMA6NI47 508 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms