RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 FBXW7Q969H0 707 aa7.74□□□□□ -1.17
ZEB1-224ENST00000606161 PRIM1P49642 420 aaKnown RBP7.73□□□□□ -1.17
ZEB1-224ENST00000606161 C6orf132Q5T0Z8 1188 aa7.72□□□□□ -1.17
ZEB1-224ENST00000606161 THSD4Q6ZMP0 1018 aa7.72□□□□□ -1.17
ZEB1-224ENST00000606161 STAC3Q96MF2 364 aa7.72□□□□□ -1.17
ZEB1-224ENST00000606161 EPAS1Q99814 870 aa7.72□□□□□ -1.17
ZEB1-224ENST00000606161 PLA2G2EQ9NZK7 142 aa7.72□□□□□ -1.17
ZEB1-224ENST00000606161 E2F4Q16254 413 aa7.71□□□□□ -1.18
ZEB1-224ENST00000606161 RBM33Q96EV2 1170 aaKnown RBP7.71□□□□□ -1.18
ZEB1-224ENST00000606161 ARIH1Q9Y4X5 557 aaPredicted RBP7.71□□□□□ -1.18
ZEB1-224ENST00000606161 PTPN5P54829 565 aa7.7□□□□□ -1.18
ZEB1-224ENST00000606161 TSR1Q2NL82 804 aaKnown RBP7.7□□□□□ -1.18
ZEB1-224ENST00000606161 MRPL50Q8N5N7 158 aaKnown RBP7.7□□□□□ -1.18
ZEB1-224ENST00000606161 RABGEF1Q9UJ41 708 aa7.7□□□□□ -1.18
ZEB1-224ENST00000606161 EN1Q05925 392 aaPredicted RBP7.69□□□□□ -1.18
ZEB1-224ENST00000606161 NBR1Q14596 966 aa7.69□□□□□ -1.18
ZEB1-224ENST00000606161 WNT2BQ93097 391 aa7.69□□□□□ -1.18
ZEB1-224ENST00000606161 NBPF3Q9H094 633 aa7.68□□□□□ -1.18
ZEB1-224ENST00000606161 TSHZ2Q9NRE2 1034 aa7.68□□□□□ -1.18
ZEB1-224ENST00000606161 SPDYE16A6NNV3 312 aaPredicted RBP7.67□□□□□ -1.18
ZEB1-224ENST00000606161 KIAA1468Q9P260 1216 aa7.67□□□□□ -1.18
ZEB1-224ENST00000606161 TRIM6-TRIM34B2RNG4 842 aa7.65□□□□□ -1.18
ZEB1-224ENST00000606161 WDR70Q9NW82 654 aa7.65□□□□□ -1.18
ZEB1-224ENST00000606161 SEPT9Q9UHD8 586 aaPredicted RBP7.65□□□□□ -1.18
ZEB1-224ENST00000606161 TSKSQ9UJT2 592 aa7.65□□□□□ -1.18
ZEB1-224ENST00000606161 GOLGA8CPA6NN73 597 aa7.64□□□□□ -1.19
ZEB1-224ENST00000606161 MAP3K7O43318 606 aa7.64□□□□□ -1.19
ZEB1-224ENST00000606161 BCAMP50895 628 aa7.64□□□□□ -1.19
ZEB1-224ENST00000606161 GRXCR2A6NFK2 248 aa7.63□□□□□ -1.19
ZEB1-224ENST00000606161 C3orf80F5H4A9 247 aa7.63□□□□□ -1.19
ZEB1-224ENST00000606161 ONECUT3O60422 494 aaPredicted RBP7.63□□□□□ -1.19
ZEB1-224ENST00000606161 CDHR5Q9HBB8 845 aa7.63□□□□□ -1.19
ZEB1-224ENST00000606161 FAM198AQ9UFP1 575 aa7.63□□□□□ -1.19
ZEB1-224ENST00000606161 OSBPP22059 807 aa7.62□□□□□ -1.19
ZEB1-224ENST00000606161 LAPTM4BQ86VI4 370 aa7.62□□□□□ -1.19
ZEB1-224ENST00000606161 ZFRQ96KR1 1074 aaKnown RBP7.62□□□□□ -1.19
ZEB1-224ENST00000606161 SOWAHBA6NEL2 793 aa7.6□□□□□ -1.19
ZEB1-224ENST00000606161 ANKK1Q8NFD2 765 aa7.6□□□□□ -1.19
ZEB1-224ENST00000606161 FAM98CQ17RN3 349 aaKnown RBP7.59□□□□□ -1.19
ZEB1-224ENST00000606161 KCNV2Q8TDN2 545 aa7.59□□□□□ -1.19
ZEB1-224ENST00000606161 CDCA7LQ96GN5 454 aa7.58□□□□□ -1.2
ZEB1-224ENST00000606161 SMAPO00193 183 aa7.57□□□□□ -1.2
ZEB1-224ENST00000606161 SLC24A1O60721 1099 aa7.57□□□□□ -1.2
ZEB1-224ENST00000606161 PRSS12P56730 875 aa7.57□□□□□ -1.2
ZEB1-224ENST00000606161 IFFO2Q5TF58 517 aa7.57□□□□□ -1.2
ZEB1-224ENST00000606161 WBP1LQ9NX94 342 aa7.57□□□□□ -1.2
ZEB1-224ENST00000606161 MLLT3P42568 568 aaPredicted RBP7.56□□□□□ -1.2
ZEB1-224ENST00000606161 NPDC1Q9NQX5 325 aaPredicted RBP7.55□□□□□ -1.2
ZEB1-224ENST00000606161 ITGBL1O95965 494 aaPredicted RBP7.54□□□□□ -1.2
ZEB1-224ENST00000606161 ARHGEF1Q92888 912 aaKnown RBP7.54□□□□□ -1.2
ZEB1-224ENST00000606161 A0A0G2JS52 829 aa7.53□□□□□ -1.2
ZEB1-224ENST00000606161 PACS2Q86VP3 889 aa7.53□□□□□ -1.2
ZEB1-224ENST00000606161 CERKQ8TCT0 537 aa7.53□□□□□ -1.2
ZEB1-224ENST00000606161 TTC13Q8NBP0 860 aa7.52□□□□□ -1.21
ZEB1-224ENST00000606161 TATDN2Q93075 761 aa7.52□□□□□ -1.21
ZEB1-224ENST00000606161 LRCH3Q96II8 777 aa7.52□□□□□ -1.21
ZEB1-224ENST00000606161 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.52□□□□□ -1.21
ZEB1-224ENST00000606161 HPS5Q9UPZ3 1129 aa7.52□□□□□ -1.21
ZEB1-224ENST00000606161 PADI6Q6TGC4 694 aa7.51□□□□□ -1.21
ZEB1-224ENST00000606161 RBM27Q9P2N5 1060 aaKnown RBP7.51□□□□□ -1.21
ZEB1-224ENST00000606161 PNMA3Q9UL41 463 aa7.51□□□□□ -1.21
ZEB1-224ENST00000606161 NUDT18Q6ZVK8 323 aa7.5□□□□□ -1.21
ZEB1-224ENST00000606161 SAMD7Q7Z3H4 446 aa7.5□□□□□ -1.21
ZEB1-224ENST00000606161 TSR3Q9UJK0 312 aaKnown RBP7.5□□□□□ -1.21
ZEB1-224ENST00000606161 NBPF26B4DH59 902 aa7.49□□□□□ -1.21
ZEB1-224ENST00000606161 NYAP1Q6ZVC0 841 aa7.48□□□□□ -1.21
ZEB1-224ENST00000606161 PLCB2Q00722 1185 aa7.47□□□□□ -1.21
ZEB1-224ENST00000606161 SEMA3EO15041 775 aa7.45□□□□□ -1.22
ZEB1-224ENST00000606161 PTGDRQ13258 359 aa7.45□□□□□ -1.22
ZEB1-224ENST00000606161 PPP4CP60510 307 aa7.44□□□□□ -1.22
ZEB1-224ENST00000606161 EYA1Q99502 592 aa7.44□□□□□ -1.22
ZEB1-224ENST00000606161 KCNC4Q03721 635 aa7.43□□□□□ -1.22
ZEB1-224ENST00000606161 TJAP1Q5JTD0 557 aa7.43□□□□□ -1.22
ZEB1-224ENST00000606161 RGS20O76081 388 aa7.42□□□□□ -1.22
ZEB1-224ENST00000606161 APLP1P51693 650 aa7.42□□□□□ -1.22
ZEB1-224ENST00000606161 SWT1Q5T5J6 900 aaKnown RBP7.42□□□□□ -1.22
ZEB1-224ENST00000606161 P3H3Q8IVL6 736 aa7.42□□□□□ -1.22
ZEB1-224ENST00000606161 RNF40O75150 1001 aa7.4□□□□□ -1.22
ZEB1-224ENST00000606161 FAM161AQ3B820 660 aa7.4□□□□□ -1.22
ZEB1-224ENST00000606161 MTRQ99707 1265 aa7.4□□□□□ -1.22
ZEB1-224ENST00000606161 ADGRG1Q9Y653 693 aa7.39□□□□□ -1.23
ZEB1-224ENST00000606161 NUTM2FA1L443 756 aa7.38□□□□□ -1.23
ZEB1-224ENST00000606161 TESPA1A2RU30 521 aaPredicted RBP7.38□□□□□ -1.23
ZEB1-224ENST00000606161 ZNF516Q92618 1163 aa7.37□□□□□ -1.23
ZEB1-224ENST00000606161 KDM2AQ9Y2K7 1162 aa7.37□□□□□ -1.23
ZEB1-224ENST00000606161 GPR37O15354 613 aa7.36□□□□□ -1.23
ZEB1-224ENST00000606161 RBM26Q5T8P6 1007 aaKnown RBP7.36□□□□□ -1.23
ZEB1-224ENST00000606161 IL21Q9HBE4 155 aa7.35□□□□□ -1.23
ZEB1-224ENST00000606161 SLF2Q8IX21 1173 aa7.34□□□□□ -1.23
ZEB1-224ENST00000606161 NKX2-3Q8TAU0 364 aa7.34□□□□□ -1.23
ZEB1-224ENST00000606161 TMEM134Q9H6X4 195 aa7.34□□□□□ -1.23
ZEB1-224ENST00000606161 RCCD1A6NED2 376 aa7.33□□□□□ -1.24
ZEB1-224ENST00000606161 FCHSD2O94868 740 aa7.33□□□□□ -1.24
ZEB1-224ENST00000606161 FECHP22830 423 aa7.33□□□□□ -1.24
ZEB1-224ENST00000606161 DNAJB2P25686 324 aa7.33□□□□□ -1.24
ZEB1-224ENST00000606161 HDGFP51858 240 aaKnown RBP7.33□□□□□ -1.24
ZEB1-224ENST00000606161 HAP1P54257 671 aaPredicted RBP7.33□□□□□ -1.24
ZEB1-224ENST00000606161 COPS2P61201 443 aa7.32□□□□□ -1.24
ZEB1-224ENST00000606161 RBM46Q8TBY0 533 aaKnown RBP7.32□□□□□ -1.24
ZEB1-224ENST00000606161 IRX2Q9BZI1 471 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms