RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 PTPRTO14522 1441 aa21.65■■□□□ 1.06
CTSA-211ENST00000606066 NCOA1Q15788 1441 aa21.64■■□□□ 1.06
CTSA-211ENST00000606066 KIF3BO15066 747 aa21.63■■□□□ 1.05
CTSA-211ENST00000606066 ADGRL2O95490 1459 aa21.63■■□□□ 1.05
CTSA-211ENST00000606066 CNTLNQ9NXG0 1405 aa21.63■■□□□ 1.05
CTSA-211ENST00000606066 DUOX2Q9NRD8 1548 aa21.62■■□□□ 1.05
CTSA-211ENST00000606066 SETD1BQ9UPS6 1966 aaKnown RBP21.62■■□□□ 1.05
CTSA-211ENST00000606066 GGT6Q6P531 493 aa21.62■■□□□ 1.05
CTSA-211ENST00000606066 PTPRKQ15262 1439 aa21.62■■□□□ 1.05
CTSA-211ENST00000606066 ROCK1Q13464 1354 aa21.61■■□□□ 1.05
CTSA-211ENST00000606066 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
CTSA-211ENST00000606066 PREX1Q8TCU6 1659 aa21.6■■□□□ 1.05
CTSA-211ENST00000606066 ERBINQ96RT1 1412 aa21.58■■□□□ 1.05
CTSA-211ENST00000606066 ZMYM3Q14202 1370 aa21.56■■□□□ 1.04
CTSA-211ENST00000606066 NPATQ14207 1427 aa21.55■■□□□ 1.04
CTSA-211ENST00000606066 STRCQ7RTU9 1775 aa21.53■■□□□ 1.04
CTSA-211ENST00000606066 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
CTSA-211ENST00000606066 EIF2AK4Q9P2K8 1649 aaKnown RBP21.52■■□□□ 1.04
CTSA-211ENST00000606066 WASHC2CQ9Y4E1 1318 aa21.51■■□□□ 1.03
CTSA-211ENST00000606066 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
CTSA-211ENST00000606066 FAM135AQ9P2D6 1515 aa21.46■■□□□ 1.03
CTSA-211ENST00000606066 PKD2Q13563 968 aa21.46■■□□□ 1.03
CTSA-211ENST00000606066 ILDR2Q71H61 639 aa21.46■■□□□ 1.03
CTSA-211ENST00000606066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.46■■□□□ 1.031e-6■□□□□ 9.5
CTSA-211ENST00000606066 KANK1Q14678 1352 aa21.46■■□□□ 1.03
CTSA-211ENST00000606066 IQSEC2Q5JU85 1478 aa21.45■■□□□ 1.03
CTSA-211ENST00000606066 LTBP4Q8N2S1 1624 aa21.45■■□□□ 1.02
CTSA-211ENST00000606066 C3P01024 1663 aa21.45■■□□□ 1.02
CTSA-211ENST00000606066 RNF17Q9BXT8 1623 aaKnown RBP21.44■■□□□ 1.02
CTSA-211ENST00000606066 NCKAP5LQ9HCH0 1330 aa21.44■■□□□ 1.02
CTSA-211ENST00000606066 SOCS7O14512 581 aa21.43■■□□□ 1.02
CTSA-211ENST00000606066 KDM5DQ9BY66 1539 aa21.43■■□□□ 1.02
CTSA-211ENST00000606066 HFM1A2PYH4 1435 aa21.42■■□□□ 1.02
CTSA-211ENST00000606066 NAIPQ13075 1403 aa21.41■■□□□ 1.02
CTSA-211ENST00000606066 PRDM15P57071 1507 aaPredicted RBP21.39■■□□□ 1.01
CTSA-211ENST00000606066 MROH2AA6NES4 1674 aa21.37■■□□□ 1.01
CTSA-211ENST00000606066 CLTCQ00610 1675 aaKnown RBP21.37■■□□□ 1.01
CTSA-211ENST00000606066 MROH1Q8NDA8 1641 aa21.37■■□□□ 1.01
CTSA-211ENST00000606066 ABCC3O15438 1527 aa21.37■■□□□ 1.01
CTSA-211ENST00000606066 PLA2R1Q13018 1463 aa21.37■■□□□ 1.01
CTSA-211ENST00000606066 DEPDC5O75140 1603 aa21.37■■□□□ 1.01
CTSA-211ENST00000606066 CAMSAP1Q5T5Y3 1602 aa21.37■■□□□ 1.01
CTSA-211ENST00000606066 ZNF335Q9H4Z2 1342 aaPredicted RBP21.36■■□□□ 1.01
CTSA-211ENST00000606066 ZC3H13Q5T200 1668 aaKnown RBP21.34■■□□□ 1.01
CTSA-211ENST00000606066 NUP155O75694 1391 aa21.33■■□□□ 1
CTSA-211ENST00000606066 ACIN1Q9UKV3 1341 aaKnown RBP21.32■■□□□ 1
CTSA-211ENST00000606066 UBAP1LF5GYI3 381 aa21.32■■□□□ 1
CTSA-211ENST00000606066 PZPP20742 1482 aa21.32■■□□□ 1
CTSA-211ENST00000606066 LMTK2Q8IWU2 1503 aa21.31■■□□□ 1
CTSA-211ENST00000606066 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
CTSA-211ENST00000606066 GCC2Q8IWJ2 1684 aa21.31■■□□□ 1
CTSA-211ENST00000606066 ARHGAP31Q2M1Z3 1444 aa21.3■■□□□ 1
CTSA-211ENST00000606066 UNC13BO14795 1591 aa21.3■■□□□ 1
CTSA-211ENST00000606066 FBXO31Q5XUX0 539 aaPredicted RBP21.29■■□□□ 1
CTSA-211ENST00000606066 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
CTSA-211ENST00000606066 TRIM52Q96A61 297 aa21.28■■□□□ 1
CTSA-211ENST00000606066 TNRQ92752 1358 aa21.25■□□□□ 0.99
CTSA-211ENST00000606066 CEP152O94986 1710 aa21.25■□□□□ 0.99
CTSA-211ENST00000606066 TRIM26Q12899 539 aaPredicted RBP21.25■□□□□ 0.99
CTSA-211ENST00000606066 A2ML1A8K2U0 1454 aa21.25■□□□□ 0.99
CTSA-211ENST00000606066 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
CTSA-211ENST00000606066 THEMISQ8N1K5 641 aaPredicted RBP21.22■□□□□ 0.99
CTSA-211ENST00000606066 EFCAB6Q5THR3 1501 aa21.22■□□□□ 0.99
CTSA-211ENST00000606066 IQGAP3Q86VI3 1631 aa21.22■□□□□ 0.99
CTSA-211ENST00000606066 RPRD2Q5VT52 1461 aaKnown RBP21.21■□□□□ 0.99
CTSA-211ENST00000606066 ANKLE2Q86XL3 938 aa21.21■□□□□ 0.99
CTSA-211ENST00000606066 ERVK-7P63135 1459 aa21.2■□□□□ 0.98
CTSA-211ENST00000606066 HRCP23327 699 aa21.2■□□□□ 0.98
CTSA-211ENST00000606066 RAB3GAP2Q9H2M9 1393 aa21.2■□□□□ 0.98
CTSA-211ENST00000606066 SPATA31D1Q6ZQQ2 1576 aa21.19■□□□□ 0.98
CTSA-211ENST00000606066 TET3O43151 1660 aa21.18■□□□□ 0.98
CTSA-211ENST00000606066 TOM1O60784 492 aa21.18■□□□□ 0.98
CTSA-211ENST00000606066 SLC4A1APQ9BWU0 796 aaKnown RBP21.18■□□□□ 0.98
CTSA-211ENST00000606066 NLRP1Q9C000 1473 aa21.17■□□□□ 0.98
CTSA-211ENST00000606066 MYO3AQ8NEV4 1616 aa21.17■□□□□ 0.98
CTSA-211ENST00000606066 ZNF142P52746 1687 aaPredicted RBP21.17■□□□□ 0.98
CTSA-211ENST00000606066 SLC52A1Q9NWF4 448 aa21.15■□□□□ 0.98
CTSA-211ENST00000606066 NOS1P29475 1434 aa21.14■□□□□ 0.98
CTSA-211ENST00000606066 MPHOSPH9Q99550 1183 aa21.13■□□□□ 0.97
CTSA-211ENST00000606066 HSPA1LP34931 641 aa21.11■□□□□ 0.97
CTSA-211ENST00000606066 CPS1P31327 1500 aa21.09■□□□□ 0.97
CTSA-211ENST00000606066 IDI1Q13907 227 aa21.09■□□□□ 0.97
CTSA-211ENST00000606066 STAG3Q9UJ98 1225 aa21.09■□□□□ 0.97
CTSA-211ENST00000606066 PIP4K2BP78356 416 aa21.08■□□□□ 0.97
CTSA-211ENST00000606066 E9PCH4 1651 aa21.08■□□□□ 0.96
CTSA-211ENST00000606066 MED14O60244 1454 aa21.07■□□□□ 0.96
CTSA-211ENST00000606066 UGGT1Q9NYU2 1555 aa21.06■□□□□ 0.96
CTSA-211ENST00000606066 NPHP4O75161 1426 aaPredicted RBP21.04■□□□□ 0.96
CTSA-211ENST00000606066 CFAP65Q6ZU64 1925 aaKnown RBP21.04■□□□□ 0.96
CTSA-211ENST00000606066 SYNMO15061 1565 aa21.04■□□□□ 0.96
CTSA-211ENST00000606066 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
CTSA-211ENST00000606066 NEURL4Q96JN8 1562 aa21.03■□□□□ 0.96
CTSA-211ENST00000606066 FOXD1Q16676 465 aa21.01■□□□□ 0.95
CTSA-211ENST00000606066 CHGAP10645 457 aaKnown RBP20.99■□□□□ 0.95
CTSA-211ENST00000606066 TRPM2O94759 1503 aa20.98■□□□□ 0.95
CTSA-211ENST00000606066 PIK3C2BO00750 1634 aa20.96■□□□□ 0.95
CTSA-211ENST00000606066 HDGFP51858 240 aaKnown RBP20.96■□□□□ 0.95
CTSA-211ENST00000606066 EID1Q9Y6B2 187 aa20.96■□□□□ 0.95
CTSA-211ENST00000606066 SPHKAPQ2M3C7 1700 aa20.95■□□□□ 0.94
CTSA-211ENST00000606066 ADGRB3O60242 1522 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms