RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 CFAP44Q96MT7 982 aa7.67□□□□□ -1.18
IGHV3-29-201ENST00000604817 MAP3K9P80192 1104 aa7.66□□□□□ -1.18
IGHV3-29-201ENST00000604817 LARP6Q9BRS8 491 aaKnown RBP7.66□□□□□ -1.18
IGHV3-29-201ENST00000604817 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
IGHV3-29-201ENST00000604817 GTPBP6O43824 516 aaPredicted RBP7.65□□□□□ -1.18
IGHV3-29-201ENST00000604817 MFSD10Q14728 455 aa7.65□□□□□ -1.18
IGHV3-29-201ENST00000604817 WNT2BQ93097 391 aa7.64□□□□□ -1.19
IGHV3-29-201ENST00000604817 ADAM33Q9BZ11 813 aa7.63□□□□□ -1.19
IGHV3-29-201ENST00000604817 PPP1R3GB7ZBB8 358 aa7.62□□□□□ -1.19
IGHV3-29-201ENST00000604817 FBXW7Q969H0 707 aa7.61□□□□□ -1.19
IGHV3-29-201ENST00000604817 ARXQ96QS3 562 aa7.6□□□□□ -1.19
IGHV3-29-201ENST00000604817 RABGEF1Q9UJ41 708 aa7.6□□□□□ -1.19
IGHV3-29-201ENST00000604817 A0A0G2JS52 829 aa7.59□□□□□ -1.19
IGHV3-29-201ENST00000604817 TULP1O00294 542 aaPredicted RBP7.59□□□□□ -1.19
IGHV3-29-201ENST00000604817 ANKK1Q8NFD2 765 aa7.59□□□□□ -1.19
IGHV3-29-201ENST00000604817 PHF14O94880 888 aa7.58□□□□□ -1.2
IGHV3-29-201ENST00000604817 TYW1BQ6NUM6 668 aa7.58□□□□□ -1.2
IGHV3-29-201ENST00000604817 EMILIN3Q9NT22 766 aa7.58□□□□□ -1.2
IGHV3-29-201ENST00000604817 PCDHGA10Q9Y5H3 936 aa7.58□□□□□ -1.2
IGHV3-29-201ENST00000604817 LAPTM4BQ86VI4 370 aa7.57□□□□□ -1.2
IGHV3-29-201ENST00000604817 ONECUT3O60422 494 aaPredicted RBP7.56□□□□□ -1.2
IGHV3-29-201ENST00000604817 NYAP1Q6ZVC0 841 aa7.56□□□□□ -1.2
IGHV3-29-201ENST00000604817 NISCHQ9Y2I1 1504 aa7.56□□□□□ -1.2
IGHV3-29-201ENST00000604817 EPAS1Q99814 870 aa7.55□□□□□ -1.2
IGHV3-29-201ENST00000604817 IRX2Q9BZI1 471 aaPredicted RBP7.54□□□□□ -1.2
IGHV3-29-201ENST00000604817 ITGBL1O95965 494 aaPredicted RBP7.53□□□□□ -1.2
IGHV3-29-201ENST00000604817 COL9A1P20849 921 aa7.53□□□□□ -1.2
IGHV3-29-201ENST00000604817 PROX2Q3B8N5 592 aa7.53□□□□□ -1.2
IGHV3-29-201ENST00000604817 TSHZ2Q9NRE2 1034 aa7.53□□□□□ -1.2
IGHV3-29-201ENST00000604817 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
IGHV3-29-201ENST00000604817 SOWAHBA6NEL2 793 aa7.52□□□□□ -1.21
IGHV3-29-201ENST00000604817 CAMK2BQ13554 666 aa7.52□□□□□ -1.21
IGHV3-29-201ENST00000604817 KIAA1468Q9P260 1216 aa7.5□□□□□ -1.21
IGHV3-29-201ENST00000604817 C6orf132Q5T0Z8 1188 aa7.49□□□□□ -1.21
IGHV3-29-201ENST00000604817 CADPS2Q86UW7 1296 aa7.49□□□□□ -1.21
IGHV3-29-201ENST00000604817 ZFRQ96KR1 1074 aaKnown RBP7.49□□□□□ -1.21
IGHV3-29-201ENST00000604817 BCAMP50895 628 aa7.48□□□□□ -1.21
IGHV3-29-201ENST00000604817 TRIM6-TRIM34B2RNG4 842 aa7.47□□□□□ -1.21
IGHV3-29-201ENST00000604817 DPYSL4O14531 572 aa7.47□□□□□ -1.21
IGHV3-29-201ENST00000604817 FAM98CQ17RN3 349 aaKnown RBP7.47□□□□□ -1.21
IGHV3-29-201ENST00000604817 KCNC4Q03721 635 aa7.46□□□□□ -1.22
IGHV3-29-201ENST00000604817 LRCH3Q96II8 777 aa7.44□□□□□ -1.22
IGHV3-29-201ENST00000604817 WBP1LQ9NX94 342 aa7.44□□□□□ -1.22
IGHV3-29-201ENST00000604817 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.44□□□□□ -1.22
IGHV3-29-201ENST00000604817 SEPT9Q9UHD8 586 aaPredicted RBP7.44□□□□□ -1.22
IGHV3-29-201ENST00000604817 TSR3Q9UJK0 312 aaKnown RBP7.44□□□□□ -1.22
IGHV3-29-201ENST00000604817 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
IGHV3-29-201ENST00000604817 PACS2Q86VP3 889 aa7.43□□□□□ -1.22
IGHV3-29-201ENST00000604817 RBM33Q96EV2 1170 aaKnown RBP7.43□□□□□ -1.22
IGHV3-29-201ENST00000604817 SPDYE16A6NNV3 312 aaPredicted RBP7.42□□□□□ -1.22
IGHV3-29-201ENST00000604817 EN1Q05925 392 aaPredicted RBP7.42□□□□□ -1.22
IGHV3-29-201ENST00000604817 DDX12PQ92771 950 aa7.42□□□□□ -1.22
IGHV3-29-201ENST00000604817 NBR1Q14596 966 aa7.41□□□□□ -1.22
IGHV3-29-201ENST00000604817 PDIA6Q15084 440 aa7.41□□□□□ -1.22
IGHV3-29-201ENST00000604817 HPS5Q9UPZ3 1129 aa7.41□□□□□ -1.22
IGHV3-29-201ENST00000604817 MAP3K7O43318 606 aa7.4□□□□□ -1.22
IGHV3-29-201ENST00000604817 CERKQ8TCT0 537 aa7.4□□□□□ -1.22
IGHV3-29-201ENST00000604817 HOMEZQ8IX15 550 aa7.39□□□□□ -1.23
IGHV3-29-201ENST00000604817 LAPTM4AQ15012 233 aa7.38□□□□□ -1.23
IGHV3-29-201ENST00000604817 PPP4CP60510 307 aa7.37□□□□□ -1.23
IGHV3-29-201ENST00000604817 TMEM132AQ24JP5 1023 aa7.37□□□□□ -1.23
IGHV3-29-201ENST00000604817 P3H3Q8IVL6 736 aa7.37□□□□□ -1.23
IGHV3-29-201ENST00000604817 TSKSQ9UJT2 592 aa7.37□□□□□ -1.23
IGHV3-29-201ENST00000604817 Q6ZNB5 142 aa7.36□□□□□ -1.23
IGHV3-29-201ENST00000604817 TSR1Q2NL82 804 aaKnown RBP7.35□□□□□ -1.23
IGHV3-29-201ENST00000604817 CDCA7LQ96GN5 454 aa7.35□□□□□ -1.23
IGHV3-29-201ENST00000604817 ARIH1Q9Y4X5 557 aaPredicted RBP7.35□□□□□ -1.23
IGHV3-29-201ENST00000604817 NBPF26B4DH59 902 aa7.34□□□□□ -1.23
IGHV3-29-201ENST00000604817 PRSS12P56730 875 aa7.34□□□□□ -1.23
IGHV3-29-201ENST00000604817 E2F4Q16254 413 aa7.33□□□□□ -1.24
IGHV3-29-201ENST00000604817 HDGFP51858 240 aaKnown RBP7.32□□□□□ -1.24
IGHV3-29-201ENST00000604817 SAMD7Q7Z3H4 446 aa7.32□□□□□ -1.24
IGHV3-29-201ENST00000604817 NECTIN2Q92692 538 aa7.32□□□□□ -1.24
IGHV3-29-201ENST00000604817 WDR70Q9NW82 654 aa7.32□□□□□ -1.24
IGHV3-29-201ENST00000604817 RBM27Q9P2N5 1060 aaKnown RBP7.32□□□□□ -1.24
IGHV3-29-201ENST00000604817 TJAP1Q5JTD0 557 aa7.31□□□□□ -1.24
IGHV3-29-201ENST00000604817 IL21Q9HBE4 155 aa7.31□□□□□ -1.24
IGHV3-29-201ENST00000604817 TATDN2Q93075 761 aa7.3□□□□□ -1.24
IGHV3-29-201ENST00000604817 PNMA3Q9UL41 463 aa7.3□□□□□ -1.24
IGHV3-29-201ENST00000604817 GRXCR2A6NFK2 248 aa7.28□□□□□ -1.24
IGHV3-29-201ENST00000604817 SMAPO00193 183 aa7.28□□□□□ -1.24
IGHV3-29-201ENST00000604817 MTRQ99707 1265 aa7.28□□□□□ -1.24
IGHV3-29-201ENST00000604817 GFRA3O60609 400 aa7.27□□□□□ -1.25
IGHV3-29-201ENST00000604817 C14orf37Q86TY3 774 aa7.27□□□□□ -1.25
IGHV3-29-201ENST00000604817 FAM198AQ9UFP1 575 aa7.27□□□□□ -1.25
IGHV3-29-201ENST00000604817 V9GY48 417 aaPredicted RBP7.27□□□□□ -1.25
IGHV3-29-201ENST00000604817 PRKD2Q9BZL6 878 aa7.26□□□□□ -1.25
IGHV3-29-201ENST00000604817 OSBPP22059 807 aa7.25□□□□□ -1.25
IGHV3-29-201ENST00000604817 SLC4A3P48751 1232 aa7.25□□□□□ -1.25
IGHV3-29-201ENST00000604817 NUDT18Q6ZVK8 323 aa7.25□□□□□ -1.25
IGHV3-29-201ENST00000604817 NRG2O14511 850 aaPredicted RBP7.24□□□□□ -1.25
IGHV3-29-201ENST00000604817 RNF40O75150 1001 aa7.24□□□□□ -1.25
IGHV3-29-201ENST00000604817 GGCXP38435 758 aa7.24□□□□□ -1.25
IGHV3-29-201ENST00000604817 PRIM1P49642 420 aaKnown RBP7.24□□□□□ -1.25
IGHV3-29-201ENST00000604817 PPP1R18Q6NYC8 613 aa7.24□□□□□ -1.25
IGHV3-29-201ENST00000604817 TRAF7Q6Q0C0 670 aa7.24□□□□□ -1.25
IGHV3-29-201ENST00000604817 SLF2Q8IX21 1173 aa7.24□□□□□ -1.25
IGHV3-29-201ENST00000604817 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.24□□□□□ -1.25
IGHV3-29-201ENST00000604817 C3orf80F5H4A9 247 aa7.22□□□□□ -1.25
IGHV3-29-201ENST00000604817 APLP1P51693 650 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms