RNA–Protein interactions for RNA: ENST00000603610.1

FOCAD-206, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 214 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-206ENST00000603610 TMC2Q8TDI7 906 aa6.89□□□□□ -1.31
FOCAD-206ENST00000603610 KIF12Q96FN5 646 aa6.89□□□□□ -1.31
FOCAD-206ENST00000603610 PRM3Q9NNZ6 103 aa6.89□□□□□ -1.31
FOCAD-206ENST00000603610 MYT1LQ9UL68 1186 aa6.89□□□□□ -1.31
FOCAD-206ENST00000603610 MAP3K9P80192 1104 aa6.88□□□□□ -1.31
FOCAD-206ENST00000603610 FOXK1P85037 733 aa6.88□□□□□ -1.31
FOCAD-206ENST00000603610 CCDC27Q2M243 656 aa6.88□□□□□ -1.31
FOCAD-206ENST00000603610 TMUB1Q9BVT8 246 aa6.88□□□□□ -1.31
FOCAD-206ENST00000603610 PTGDRQ13258 359 aa6.87□□□□□ -1.31
FOCAD-206ENST00000603610 CHADLQ6NUI6 762 aa6.87□□□□□ -1.31
FOCAD-206ENST00000603610 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
FOCAD-206ENST00000603610 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.87□□□□□ -1.31
FOCAD-206ENST00000603610 REPIN1Q9BWE0 567 aaKnown RBP6.87□□□□□ -1.31
FOCAD-206ENST00000603610 CSB-PGBD3P0DP91 1061 aa6.86□□□□□ -1.31
FOCAD-206ENST00000603610 SSTR3P32745 418 aaPredicted RBP6.86□□□□□ -1.31
FOCAD-206ENST00000603610 PTGER2P43116 358 aa6.86□□□□□ -1.31
FOCAD-206ENST00000603610 TMEM259Q4ZIN3 620 aa6.86□□□□□ -1.31
FOCAD-206ENST00000603610 PROCA1Q8NCQ7 364 aaPredicted RBP6.86□□□□□ -1.31
FOCAD-206ENST00000603610 PUS7Q96PZ0 661 aaKnown RBP6.86□□□□□ -1.31
FOCAD-206ENST00000603610 BEGAINQ9BUH8 593 aa6.86□□□□□ -1.31
FOCAD-206ENST00000603610 CLK2P49760 499 aaKnown RBP6.85□□□□□ -1.31
FOCAD-206ENST00000603610 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
FOCAD-206ENST00000603610 SOCS7O14512 581 aa6.84□□□□□ -1.31
FOCAD-206ENST00000603610 TBC1D12O60347 775 aa6.84□□□□□ -1.31
FOCAD-206ENST00000603610 RFC5P40937 340 aa6.84□□□□□ -1.31
FOCAD-206ENST00000603610 MDM2Q00987 491 aaPredicted RBP6.84□□□□□ -1.31
FOCAD-206ENST00000603610 RSPH4AQ5TD94 716 aa6.84□□□□□ -1.31
FOCAD-206ENST00000603610 GLMNQ92990 594 aa6.84□□□□□ -1.31
FOCAD-206ENST00000603610 POLR3EQ9NVU0 708 aa6.84□□□□□ -1.31
FOCAD-206ENST00000603610 DIXDC1Q155Q3 683 aa6.83□□□□□ -1.32
FOCAD-206ENST00000603610 SND1Q7KZF4 910 aaKnown RBP eCLIP6.83□□□□□ -1.32
FOCAD-206ENST00000603610 PLPP6Q8IY26 295 aa6.83□□□□□ -1.32
FOCAD-206ENST00000603610 SNRKQ9NRH2 765 aa6.83□□□□□ -1.32
FOCAD-206ENST00000603610 MYSM1Q5VVJ2 828 aa6.82□□□□□ -1.32
FOCAD-206ENST00000603610 TMEM106CQ9BVX2 250 aa6.82□□□□□ -1.32
FOCAD-206ENST00000603610 GDPD2Q9HCC8 539 aa6.82□□□□□ -1.32
FOCAD-206ENST00000603610 TTBK1Q5TCY1 1321 aaPredicted RBP6.81□□□□□ -1.32
FOCAD-206ENST00000603610 DDX12PQ92771 950 aa6.81□□□□□ -1.32
FOCAD-206ENST00000603610 ABL2P42684 1182 aa6.8□□□□□ -1.32
FOCAD-206ENST00000603610 FAM217BQ9NTX9 383 aaPredicted RBP6.8□□□□□ -1.32
FOCAD-206ENST00000603610 IVNS1ABPQ9Y6Y0 642 aa6.8□□□□□ -1.32
FOCAD-206ENST00000603610 PPP2R2DQ66LE6 453 aa6.79□□□□□ -1.32
FOCAD-206ENST00000603610 ILDR1Q86SU0 546 aaPredicted RBP6.78□□□□□ -1.32
FOCAD-206ENST00000603610 MTMR14Q8NCE2 650 aa6.78□□□□□ -1.32
FOCAD-206ENST00000603610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.78□□□□□ -1.32
FOCAD-206ENST00000603610 MICALL2Q8IY33 904 aa6.77□□□□□ -1.33
FOCAD-206ENST00000603610 POM121CA8CG34 1229 aa6.76□□□□□ -1.33
FOCAD-206ENST00000603610 B4GALNT3Q6L9W6 998 aa6.76□□□□□ -1.33
FOCAD-206ENST00000603610 UPF1Q92900 1129 aaKnown RBP eCLIP6.76□□□□□ -1.33
FOCAD-206ENST00000603610 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.75□□□□□ -1.33
FOCAD-206ENST00000603610 TBC1D2Q9BYX2 928 aa6.75□□□□□ -1.33
FOCAD-206ENST00000603610 OATP04181 439 aa6.74□□□□□ -1.33
FOCAD-206ENST00000603610 PRKAR2AP13861 404 aaKnown RBP6.74□□□□□ -1.33
FOCAD-206ENST00000603610 RFX1P22670 979 aa6.74□□□□□ -1.33
FOCAD-206ENST00000603610 WASHC4Q2M389 1173 aa6.74□□□□□ -1.33
FOCAD-206ENST00000603610 TUSC1Q2TAM9 212 aa6.74□□□□□ -1.33
FOCAD-206ENST00000603610 C2orf72A6NCS6 295 aa6.73□□□□□ -1.33
FOCAD-206ENST00000603610 PRIM1P49642 420 aaKnown RBP6.73□□□□□ -1.33
FOCAD-206ENST00000603610 PHOX2BQ99453 314 aa6.73□□□□□ -1.33
FOCAD-206ENST00000603610 VRTNQ9H8Y1 702 aa6.73□□□□□ -1.33
FOCAD-206ENST00000603610 TBC1D2BQ9UPU7 963 aa6.73□□□□□ -1.33
FOCAD-206ENST00000603610 RBM47A0AV96 593 aaKnown RBP6.72□□□□□ -1.33
FOCAD-206ENST00000603610 ERCC3P19447 782 aa6.72□□□□□ -1.33
FOCAD-206ENST00000603610 CFAP70Q5T0N1 1121 aa6.72□□□□□ -1.33
FOCAD-206ENST00000603610 GNEQ9Y223 722 aaKnown RBP6.72□□□□□ -1.33
FOCAD-206ENST00000603610 KIF3CO14782 793 aa6.71□□□□□ -1.34
FOCAD-206ENST00000603610 EVI5O60447 810 aa6.71□□□□□ -1.34
FOCAD-206ENST00000603610 EN1Q05925 392 aaPredicted RBP6.71□□□□□ -1.34
FOCAD-206ENST00000603610 HDGFL1Q5TGJ6 251 aa6.71□□□□□ -1.34
FOCAD-206ENST00000603610 METTL3Q86U44 580 aaKnown RBP6.71□□□□□ -1.34
FOCAD-206ENST00000603610 EPAS1Q99814 870 aa6.71□□□□□ -1.34
FOCAD-206ENST00000603610 NDUFB9Q9Y6M9 179 aa6.71□□□□□ -1.34
FOCAD-206ENST00000603610 G3V3G9 751 aa6.7□□□□□ -1.34
FOCAD-206ENST00000603610 MAP3K7O43318 606 aa6.7□□□□□ -1.34
FOCAD-206ENST00000603610 SRPK2P78362 688 aaKnown RBP6.7□□□□□ -1.34
FOCAD-206ENST00000603610 RIC3Q7Z5B4 369 aa6.7□□□□□ -1.34
FOCAD-206ENST00000603610 PPP1R12CQ9BZL4 782 aa6.7□□□□□ -1.34
FOCAD-206ENST00000603610 CDHR5Q9HBB8 845 aa6.7□□□□□ -1.34
FOCAD-206ENST00000603610 NPDC1Q9NQX5 325 aaPredicted RBP6.7□□□□□ -1.34
FOCAD-206ENST00000603610 LIMD1Q9UGP4 676 aa6.7□□□□□ -1.34
FOCAD-206ENST00000603610 IGSF5Q9NSI5 407 aa6.69□□□□□ -1.34
FOCAD-206ENST00000603610 ZRANB1Q9UGI0 708 aa6.69□□□□□ -1.34
FOCAD-206ENST00000603610 UNCXA6NJT0 531 aa6.68□□□□□ -1.34
FOCAD-206ENST00000603610 ATG7O95352 703 aa6.68□□□□□ -1.34
FOCAD-206ENST00000603610 CANXP27824 592 aaKnown RBP6.68□□□□□ -1.34
FOCAD-206ENST00000603610 TIE1P35590 1138 aa6.68□□□□□ -1.34
FOCAD-206ENST00000603610 SPTLC1O15269 473 aa6.67□□□□□ -1.34
FOCAD-206ENST00000603610 EIF5BO60841 1220 aaKnown RBP6.67□□□□□ -1.34
FOCAD-206ENST00000603610 AP1G2O75843 785 aa6.67□□□□□ -1.34
FOCAD-206ENST00000603610 PHF14O94880 888 aa6.67□□□□□ -1.34
FOCAD-206ENST00000603610 USP17L8P0C7I0 530 aa6.67□□□□□ -1.34
FOCAD-206ENST00000603610 FAM177A1Q8N128 213 aaPredicted RBP6.67□□□□□ -1.34
FOCAD-206ENST00000603610 CCER1Q8TC90 406 aaPredicted RBP6.67□□□□□ -1.34
FOCAD-206ENST00000603610 PXYLP1Q8TE99 480 aa6.67□□□□□ -1.34
FOCAD-206ENST00000603610 PALM3A6NDB9 673 aaPredicted RBP6.66□□□□□ -1.34
FOCAD-206ENST00000603610 TMEM88BA6NKF7 163 aa6.66□□□□□ -1.34
FOCAD-206ENST00000603610 GJA5P36382 358 aa6.66□□□□□ -1.34
FOCAD-206ENST00000603610 CACNB1Q02641 598 aaPredicted RBP6.66□□□□□ -1.34
FOCAD-206ENST00000603610 FBXO31Q5XUX0 539 aaPredicted RBP6.66□□□□□ -1.34
FOCAD-206ENST00000603610 ZNF710Q8N1W2 664 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms