RNA–Protein interactions for RNA: ENST00000603610.1

FOCAD-206, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 214 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-206ENST00000603610 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
FOCAD-206ENST00000603610 AEBP2Q6ZN18 517 aaPredicted RBP12.42□□□□□ -0.42
FOCAD-206ENST00000603610 PHF23Q9BUL5 403 aaPredicted RBP11.43□□□□□ -0.58
FOCAD-206ENST00000603610 PLPPR3Q6T4P5 718 aa10.95□□□□□ -0.66
FOCAD-206ENST00000603610 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
FOCAD-206ENST00000603610 SENP3Q9H4L4 574 aaPredicted RBP10.53□□□□□ -0.72
FOCAD-206ENST00000603610 KCNA4P22459 653 aa10.35□□□□□ -0.75
FOCAD-206ENST00000603610 SLC24A1O60721 1099 aa10.14□□□□□ -0.79
FOCAD-206ENST00000603610 CSRNP3Q8WYN3 585 aa10.13□□□□□ -0.79
FOCAD-206ENST00000603610 ADRA2BP18089 450 aa10.09□□□□□ -0.79
FOCAD-206ENST00000603610 SLC4A1APQ9BWU0 796 aaKnown RBP10.05□□□□□ -0.8
FOCAD-206ENST00000603610 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
FOCAD-206ENST00000603610 PPP6R1Q9UPN7 881 aa9.8□□□□□ -0.84
FOCAD-206ENST00000603610 NCBP3Q53F19 620 aaKnown RBP9.76□□□□□ -0.85
FOCAD-206ENST00000603610 RTN4Q9NQC3 1192 aaKnown RBP9.71□□□□□ -0.86
FOCAD-206ENST00000603610 PPP4R3CPQ6ZMV5 832 aa9.7□□□□□ -0.86
FOCAD-206ENST00000603610 FOXD1Q16676 465 aa9.59□□□□□ -0.87
FOCAD-206ENST00000603610 NPM3O75607 178 aaKnown RBP9.53□□□□□ -0.88
FOCAD-206ENST00000603610 ZBTB22O15209 634 aa9.49□□□□□ -0.89
FOCAD-206ENST00000603610 FOXD4L1Q9NU39 408 aa9.37□□□□□ -0.91
FOCAD-206ENST00000603610 PIAS4Q8N2W9 510 aaPredicted RBP9.3□□□□□ -0.92
FOCAD-206ENST00000603610 CNKSR2Q8WXI2 1034 aa9.29□□□□□ -0.92
FOCAD-206ENST00000603610 DNAJC5BQ9UF47 199 aa9.19□□□□□ -0.94
FOCAD-206ENST00000603610 SCAF1Q9H7N4 1312 aaKnown RBP9.16□□□□□ -0.94
FOCAD-206ENST00000603610 FKBP8Q14318 412 aa9.15□□□□□ -0.94
FOCAD-206ENST00000603610 ATXN8OSP0DMR3 200 aa8.99□□□□□ -0.97
FOCAD-206ENST00000603610 PLCB2Q00722 1185 aa8.96□□□□□ -0.98
FOCAD-206ENST00000603610 BCANQ96GW7 911 aa8.94□□□□□ -0.98
FOCAD-206ENST00000603610 RNF216Q9NWF9 866 aaPredicted RBP8.91□□□□□ -0.98
FOCAD-206ENST00000603610 MYCNP04198 464 aaPredicted RBP8.85□□□□□ -0.99
FOCAD-206ENST00000603610 HAP1P54257 671 aaPredicted RBP8.83□□□□□ -1
FOCAD-206ENST00000603610 TAOK2Q9UL54 1235 aa8.82□□□□□ -1
FOCAD-206ENST00000603610 PRKCSHP14314 528 aaPredicted RBP8.78□□□□□ -1
FOCAD-206ENST00000603610 SLC4A2P04920 1241 aa8.76□□□□□ -1.01
FOCAD-206ENST00000603610 VSIG10Q8N0Z9 540 aa8.74□□□□□ -1.01
FOCAD-206ENST00000603610 MAPK8IP2Q13387 824 aaPredicted RBP8.68□□□□□ -1.02
FOCAD-206ENST00000603610 FBXO3Q9UK99 471 aa8.68□□□□□ -1.02
FOCAD-206ENST00000603610 TPRNQ4KMQ1 711 aa8.66□□□□□ -1.02
FOCAD-206ENST00000603610 DCAF8L2P0C7V8 631 aa8.65□□□□□ -1.02
FOCAD-206ENST00000603610 HOXD11P31277 338 aaPredicted RBP8.64□□□□□ -1.03
FOCAD-206ENST00000603610 MSH5O43196 834 aa8.63□□□□□ -1.03
FOCAD-206ENST00000603610 DAXXQ9UER7 740 aaPredicted RBP8.58□□□□□ -1.04
FOCAD-206ENST00000603610 ARXQ96QS3 562 aa8.52□□□□□ -1.05
FOCAD-206ENST00000603610 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.52□□□□□ -1.05
FOCAD-206ENST00000603610 ERICH6Q7L0X2 663 aa8.51□□□□□ -1.05
FOCAD-206ENST00000603610 DMRT2Q9Y5R5 561 aa8.51□□□□□ -1.05
FOCAD-206ENST00000603610 VASPP50552 380 aaPredicted RBP8.49□□□□□ -1.05
FOCAD-206ENST00000603610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.46□□□□□ -1.06
FOCAD-206ENST00000603610 HNRNPUL2Q1KMD3 747 aaKnown RBP8.46□□□□□ -1.06
FOCAD-206ENST00000603610 BBXQ8WY36 941 aaPredicted RBP8.45□□□□□ -1.06
FOCAD-206ENST00000603610 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
FOCAD-206ENST00000603610 KDM2AQ9Y2K7 1162 aa8.45□□□□□ -1.06
FOCAD-206ENST00000603610 SAMD1Q6SPF0 538 aaPredicted RBP8.44□□□□□ -1.06
FOCAD-206ENST00000603610 ATF5Q9Y2D1 282 aaPredicted RBP8.43□□□□□ -1.06
FOCAD-206ENST00000603610 TULP1O00294 542 aaPredicted RBP8.41□□□□□ -1.06
FOCAD-206ENST00000603610 PKD2Q13563 968 aa8.41□□□□□ -1.06
FOCAD-206ENST00000603610 SPDYE4A6NLX3 237 aa8.4□□□□□ -1.06
FOCAD-206ENST00000603610 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
FOCAD-206ENST00000603610 FBLN2P98095 1184 aa8.38□□□□□ -1.07
FOCAD-206ENST00000603610 IFNLR1Q8IU57 520 aaPredicted RBP8.38□□□□□ -1.07
FOCAD-206ENST00000603610 PROM2Q8N271 834 aa8.36□□□□□ -1.07
FOCAD-206ENST00000603610 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
FOCAD-206ENST00000603610 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
FOCAD-206ENST00000603610 NBR1Q14596 966 aa8.34□□□□□ -1.07
FOCAD-206ENST00000603610 HOMEZQ8IX15 550 aa8.31□□□□□ -1.08
FOCAD-206ENST00000603610 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
FOCAD-206ENST00000603610 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
FOCAD-206ENST00000603610 ZNF219Q9P2Y4 722 aaPredicted RBP8.27□□□□□ -1.09
FOCAD-206ENST00000603610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.26□□□□□ -1.09
FOCAD-206ENST00000603610 NPM1P06748 294 aaKnown RBP eCLIP8.24□□□□□ -1.09
FOCAD-206ENST00000603610 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
FOCAD-206ENST00000603610 SPOCK2Q92563 424 aa8.22□□□□□ -1.09
FOCAD-206ENST00000603610 APLP2Q06481 763 aa8.21□□□□□ -1.1
FOCAD-206ENST00000603610 TMEM132AQ24JP5 1023 aa8.2□□□□□ -1.1
FOCAD-206ENST00000603610 DNAJC5Q9H3Z4 198 aa8.19□□□□□ -1.1
FOCAD-206ENST00000603610 KLHL34Q8N239 644 aa8.17□□□□□ -1.1
FOCAD-206ENST00000603610 U3KPZ7 1027 aaPredicted RBP8.17□□□□□ -1.1
FOCAD-206ENST00000603610 C14orf37Q86TY3 774 aa8.16□□□□□ -1.1
FOCAD-206ENST00000603610 MKRN4PQ13434 485 aaPredicted RBP8.13□□□□□ -1.11
FOCAD-206ENST00000603610 RGL2O15211 777 aa8.11□□□□□ -1.11
FOCAD-206ENST00000603610 DCAF8L1A6NGE4 600 aa8.1□□□□□ -1.11
FOCAD-206ENST00000603610 CHGAP10645 457 aaKnown RBP8.08□□□□□ -1.12
FOCAD-206ENST00000603610 RANGAP1P46060 587 aaPredicted RBP8.04□□□□□ -1.12
FOCAD-206ENST00000603610 STAG3Q9UJ98 1225 aa8.01□□□□□ -1.13
FOCAD-206ENST00000603610 HS6ST3Q8IZP7 471 aa7.99□□□□□ -1.13
FOCAD-206ENST00000603610 PLCD3Q8N3E9 789 aa7.98□□□□□ -1.13
FOCAD-206ENST00000603610 TRIM41Q8WV44 630 aa7.98□□□□□ -1.13
FOCAD-206ENST00000603610 CIZ1Q9ULV3 898 aaPredicted RBP7.93□□□□□ -1.14
FOCAD-206ENST00000603610 PODXL2Q9NZ53 605 aa7.91□□□□□ -1.14
FOCAD-206ENST00000603610 P3H3Q8IVL6 736 aa7.9□□□□□ -1.14
FOCAD-206ENST00000603610 ZBTB47Q9UFB7 747 aaPredicted RBP7.9□□□□□ -1.14
FOCAD-206ENST00000603610 ZBTB12Q9Y330 459 aaPredicted RBP7.9□□□□□ -1.14
FOCAD-206ENST00000603610 PLEKHG5O94827 1062 aa7.88□□□□□ -1.15
FOCAD-206ENST00000603610 MIER1Q8N108 512 aa7.87□□□□□ -1.15
FOCAD-206ENST00000603610 POLA2Q14181 598 aa7.85□□□□□ -1.15
FOCAD-206ENST00000603610 SUPT5HO00267 1087 aaKnown RBP7.84□□□□□ -1.15
FOCAD-206ENST00000603610 GTPBP6O43824 516 aaPredicted RBP7.82□□□□□ -1.16
FOCAD-206ENST00000603610 RYDENQ9NUL5 291 aaKnown RBP7.82□□□□□ -1.16
FOCAD-206ENST00000603610 TRHP20396 242 aaPredicted RBP7.81□□□□□ -1.16
FOCAD-206ENST00000603610 BRPF1P55201 1214 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms