RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SALL2Q9Y467 1007 aaPredicted RBP7.06□□□□□ -1.28
SPTBN1-206ENST00000602898 CLSTN1O94985 981 aa7.05□□□□□ -1.28
SPTBN1-206ENST00000602898 CCDC27Q2M243 656 aa7.04□□□□□ -1.28
SPTBN1-206ENST00000602898 DPY19L2Q6NUT2 758 aa7.04□□□□□ -1.28
SPTBN1-206ENST00000602898 CLSPNQ9HAW4 1339 aa7.04□□□□□ -1.28
SPTBN1-206ENST00000602898 ZNF326Q5BKZ1 582 aaKnown RBP7.04□□□□□ -1.28
SPTBN1-206ENST00000602898 MS4A4AQ96JQ5 239 aa7.04□□□□□ -1.28
SPTBN1-206ENST00000602898 ZC3H15Q8WU90 426 aaKnown RBP7.04□□□□□ -1.28
SPTBN1-206ENST00000602898 BAZ1BQ9UIG0 1483 aaKnown RBP7.03□□□□□ -1.28
SPTBN1-206ENST00000602898 ZNF579Q8NAF0 562 aaKnown RBP7.02□□□□□ -1.29
SPTBN1-206ENST00000602898 CNPY4Q8N129 248 aa7.02□□□□□ -1.29
SPTBN1-206ENST00000602898 CLUAP1Q96AJ1 413 aa7.02□□□□□ -1.29
SPTBN1-206ENST00000602898 C19orf67A6NJJ6 358 aa7□□□□□ -1.29
SPTBN1-206ENST00000602898 IRF5Q13568 498 aa7□□□□□ -1.29
SPTBN1-206ENST00000602898 FBXO22Q8NEZ5 403 aa7□□□□□ -1.29
SPTBN1-206ENST00000602898 SMARCA5O60264 1052 aaPredicted RBP7□□□□□ -1.29
SPTBN1-206ENST00000602898 TTLL13PA6NNM8 815 aa6.99□□□□□ -1.29
SPTBN1-206ENST00000602898 RETREG2Q8NC44 543 aa6.99□□□□□ -1.29
SPTBN1-206ENST00000602898 KCNV2Q8TDN2 545 aa6.99□□□□□ -1.29
SPTBN1-206ENST00000602898 BMP2KQ9NSY1 1161 aaPredicted RBP6.99□□□□□ -1.29
SPTBN1-206ENST00000602898 WDR70Q9NW82 654 aa6.99□□□□□ -1.29
SPTBN1-206ENST00000602898 TRIM35Q9UPQ4 493 aa6.99□□□□□ -1.29
SPTBN1-206ENST00000602898 NESP48681 1621 aa6.98□□□□□ -1.29
SPTBN1-206ENST00000602898 NCLP19338 710 aaKnown RBP6.98□□□□□ -1.29
SPTBN1-206ENST00000602898 FBXW7Q969H0 707 aa6.98□□□□□ -1.29
SPTBN1-206ENST00000602898 CC2D2BQ6DHV5 1058 aa6.97□□□□□ -1.29
SPTBN1-206ENST00000602898 TRAIPQ9BWF2 469 aa6.97□□□□□ -1.29
SPTBN1-206ENST00000602898 SGIP1Q9BQI5 828 aa6.96□□□□□ -1.3
SPTBN1-206ENST00000602898 GOLGA2Q08379 1002 aa6.96□□□□□ -1.3
SPTBN1-206ENST00000602898 ATN1P54259 1190 aaPredicted RBP6.95□□□□□ -1.3
SPTBN1-206ENST00000602898 NCKAP5LQ9HCH0 1330 aa6.95□□□□□ -1.3
SPTBN1-206ENST00000602898 CLASP1Q7Z460 1538 aa6.95□□□□□ -1.3
SPTBN1-206ENST00000602898 RBM10P98175 930 aaKnown RBP6.95□□□□□ -1.3
SPTBN1-206ENST00000602898 TEX2Q8IWB9 1127 aa6.95□□□□□ -1.3
SPTBN1-206ENST00000602898 CCDC125Q86Z20 511 aa6.94□□□□□ -1.3
SPTBN1-206ENST00000602898 BRD1O95696 1058 aa6.94□□□□□ -1.3
SPTBN1-206ENST00000602898 IFT140Q96RY7 1462 aa6.93□□□□□ -1.3
SPTBN1-206ENST00000602898 ABCC8Q09428 1581 aa6.92□□□□□ -1.3
SPTBN1-206ENST00000602898 FAM43BQ6ZT52 329 aaPredicted RBP6.92□□□□□ -1.3
SPTBN1-206ENST00000602898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.92□□□□□ -1.34e-21■□□□□ 10.4
SPTBN1-206ENST00000602898 ARAP1Q96P48 1450 aa6.92□□□□□ -1.3
SPTBN1-206ENST00000602898 CEP164Q9UPV0 1460 aa6.92□□□□□ -1.3
SPTBN1-206ENST00000602898 LARP6Q9BRS8 491 aaKnown RBP6.92□□□□□ -1.3
SPTBN1-206ENST00000602898 UNCXA6NJT0 531 aa6.91□□□□□ -1.3
SPTBN1-206ENST00000602898 PLCD4Q9BRC7 762 aa6.91□□□□□ -1.3
SPTBN1-206ENST00000602898 ZNF777Q9ULD5 760 aaPredicted RBP6.91□□□□□ -1.3
SPTBN1-206ENST00000602898 CHD1O14646 1710 aa6.91□□□□□ -1.3
SPTBN1-206ENST00000602898 FAM50AQ14320 339 aaKnown RBP6.9□□□□□ -1.3
SPTBN1-206ENST00000602898 CADPSQ9ULU8 1353 aa6.9□□□□□ -1.3
SPTBN1-206ENST00000602898 SEMA3EO15041 775 aa6.9□□□□□ -1.31
SPTBN1-206ENST00000602898 GLIPR1L2Q4G1C9 344 aa6.9□□□□□ -1.31
SPTBN1-206ENST00000602898 COLQQ9Y215 455 aaPredicted RBP6.89□□□□□ -1.31
SPTBN1-206ENST00000602898 NLRP6P59044 892 aa6.89□□□□□ -1.31
SPTBN1-206ENST00000602898 DEKP35659 375 aaKnown RBP6.88□□□□□ -1.31
SPTBN1-206ENST00000602898 WWC1Q8IX03 1113 aa6.87□□□□□ -1.31
SPTBN1-206ENST00000602898 GABBR2O75899 941 aa6.87□□□□□ -1.31
SPTBN1-206ENST00000602898 ANAPC15P60006 121 aa6.87□□□□□ -1.31
SPTBN1-206ENST00000602898 POTEHQ6S545 545 aa6.87□□□□□ -1.31
SPTBN1-206ENST00000602898 FAM9BQ8IZU0 186 aa6.87□□□□□ -1.31
SPTBN1-206ENST00000602898 LOC102724159A0A0B4J2E5 919 aa6.87□□□□□ -1.31
SPTBN1-206ENST00000602898 PWP2Q15269 919 aaKnown RBP6.87□□□□□ -1.31
SPTBN1-206ENST00000602898 NOL8Q76FK4 1167 aaKnown RBP6.87□□□□□ -1.31
SPTBN1-206ENST00000602898 FAM117AQ9C073 453 aa6.87□□□□□ -1.31
SPTBN1-206ENST00000602898 DIEXFQ68CQ4 756 aaKnown RBP6.86□□□□□ -1.31
SPTBN1-206ENST00000602898 PDCD7Q8N8D1 485 aaKnown RBP6.86□□□□□ -1.31
SPTBN1-206ENST00000602898 FOXD4L6Q3SYB3 417 aaPredicted RBP6.86□□□□□ -1.31
SPTBN1-206ENST00000602898 FOXD4L3Q6VB84 417 aaPredicted RBP6.86□□□□□ -1.31
SPTBN1-206ENST00000602898 KIF13AQ9H1H9 1805 aa6.85□□□□□ -1.31
SPTBN1-206ENST00000602898 TRAK2O60296 914 aa6.85□□□□□ -1.31
SPTBN1-206ENST00000602898 KDM4CQ9H3R0 1056 aa6.85□□□□□ -1.31
SPTBN1-206ENST00000602898 CARNS1A5YM72 827 aa6.85□□□□□ -1.31
SPTBN1-206ENST00000602898 KCNG1Q9UIX4 513 aa6.85□□□□□ -1.31
SPTBN1-206ENST00000602898 SYNJ1O43426 1573 aa6.85□□□□□ -1.31
SPTBN1-206ENST00000602898 SUPT16HQ9Y5B9 1047 aaKnown RBP6.84□□□□□ -1.31
SPTBN1-206ENST00000602898 ATMINO43313 823 aaPredicted RBP6.84□□□□□ -1.31
SPTBN1-206ENST00000602898 SOX12O15370 315 aa6.83□□□□□ -1.32
SPTBN1-206ENST00000602898 OS9Q13438 667 aaPredicted RBP6.83□□□□□ -1.32
SPTBN1-206ENST00000602898 SECISBP2LQ93073 1101 aaKnown RBP6.83□□□□□ -1.32
SPTBN1-206ENST00000602898 EIF4G3O43432 1585 aaKnown RBP6.83□□□□□ -1.32
SPTBN1-206ENST00000602898 POTEIP0CG38 1075 aa6.83□□□□□ -1.32
SPTBN1-206ENST00000602898 TMEM92Q6UXU6 159 aa6.83□□□□□ -1.32
SPTBN1-206ENST00000602898 SGSM3Q96HU1 749 aa6.83□□□□□ -1.32
SPTBN1-206ENST00000602898 CFTRP13569 1480 aa6.82□□□□□ -1.32
SPTBN1-206ENST00000602898 POTEFA5A3E0 1075 aa6.82□□□□□ -1.32
SPTBN1-206ENST00000602898 TIE1P35590 1138 aa6.82□□□□□ -1.32
SPTBN1-206ENST00000602898 RIPOR2Q9Y4F9 1068 aa6.82□□□□□ -1.32
SPTBN1-206ENST00000602898 MARCH6O60337 910 aa6.81□□□□□ -1.32
SPTBN1-206ENST00000602898 PTMSP20962 102 aa6.81□□□□□ -1.32
SPTBN1-206ENST00000602898 DSG2Q14126 1118 aa6.81□□□□□ -1.32
SPTBN1-206ENST00000602898 BARGINQ6ZT62 677 aa6.81□□□□□ -1.32
SPTBN1-206ENST00000602898 FOSBP53539 338 aa6.81□□□□□ -1.32
SPTBN1-206ENST00000602898 MICALL2Q8IY33 904 aa6.81□□□□□ -1.32
SPTBN1-206ENST00000602898 UPF1Q92900 1129 aaKnown RBP eCLIP6.81□□□□□ -1.32
SPTBN1-206ENST00000602898 RYDENQ9NUL5 291 aaKnown RBP6.81□□□□□ -1.32
SPTBN1-206ENST00000602898 NAP1L2Q9ULW6 460 aaPredicted RBP6.81□□□□□ -1.32
SPTBN1-206ENST00000602898 MLLT3P42568 568 aaPredicted RBP6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 ZNF662Q6ZS27 426 aa6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 P3H3Q8IVL6 736 aa6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 E2F4Q16254 413 aa6.8□□□□□ -1.32
SPTBN1-206ENST00000602898 GPATCH11Q8N954 259 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms