RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 PSDA5PKW4 1024 aaPredicted RBP15.95■□□□□ 0.14
SGMS1-206ENST00000602565 TSR1Q2NL82 804 aaKnown RBP15.95■□□□□ 0.14
SGMS1-206ENST00000602565 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
SGMS1-206ENST00000602565 MAP2K5Q13163 448 aa15.93■□□□□ 0.14
SGMS1-206ENST00000602565 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
SGMS1-206ENST00000602565 FAM163AQ96GL9 167 aaPredicted RBP15.92■□□□□ 0.14
SGMS1-206ENST00000602565 NEUROD2Q15784 382 aa15.9■□□□□ 0.14
SGMS1-206ENST00000602565 C6orf132Q5T0Z8 1188 aa15.9■□□□□ 0.14
SGMS1-206ENST00000602565 LCE2DQ5TA82 110 aaPredicted RBP15.9■□□□□ 0.14
SGMS1-206ENST00000602565 ADAM33Q9BZ11 813 aa15.9■□□□□ 0.14
SGMS1-206ENST00000602565 CERKQ8TCT0 537 aa15.88■□□□□ 0.13
SGMS1-206ENST00000602565 FECHP22830 423 aa15.87■□□□□ 0.13
SGMS1-206ENST00000602565 NPDC1Q9NQX5 325 aaPredicted RBP15.87■□□□□ 0.13
SGMS1-206ENST00000602565 BRPF1P55201 1214 aaPredicted RBP15.86■□□□□ 0.13
SGMS1-206ENST00000602565 CCDC102AQ96A19 550 aa15.86■□□□□ 0.13
SGMS1-206ENST00000602565 IRF6O14896 467 aa15.85■□□□□ 0.13
SGMS1-206ENST00000602565 TRIM66O15016 1216 aa15.82■□□□□ 0.12
SGMS1-206ENST00000602565 BCL2L12Q9HB09 334 aa15.81■□□□□ 0.12
SGMS1-206ENST00000602565 PTPREP23469 700 aa15.8■□□□□ 0.12
SGMS1-206ENST00000602565 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
SGMS1-206ENST00000602565 ERBB3P21860 1342 aa15.78■□□□□ 0.12
SGMS1-206ENST00000602565 ST18O60284 1047 aa15.76■□□□□ 0.11
SGMS1-206ENST00000602565 PDE4DQ08499 809 aa15.76■□□□□ 0.11
SGMS1-206ENST00000602565 PADI6Q6TGC4 694 aa15.76■□□□□ 0.11
SGMS1-206ENST00000602565 PCDH10Q9P2E7 1040 aa15.76■□□□□ 0.11
SGMS1-206ENST00000602565 EMP3P54852 163 aa15.74■□□□□ 0.11
SGMS1-206ENST00000602565 RBM27Q9P2N5 1060 aaKnown RBP15.74■□□□□ 0.11
SGMS1-206ENST00000602565 PPP1R3GB7ZBB8 358 aa15.72■□□□□ 0.11
SGMS1-206ENST00000602565 PRSS12P56730 875 aa15.72■□□□□ 0.11
SGMS1-206ENST00000602565 VARS2Q5ST30 1063 aaKnown RBP15.71■□□□□ 0.11
SGMS1-206ENST00000602565 CDCA7LQ96GN5 454 aa15.71■□□□□ 0.11
SGMS1-206ENST00000602565 KCNK17Q96T54 332 aa15.71■□□□□ 0.11
SGMS1-206ENST00000602565 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
SGMS1-206ENST00000602565 COL9A1P20849 921 aa15.7■□□□□ 0.1
SGMS1-206ENST00000602565 AMHR2Q16671 573 aa15.69■□□□□ 0.1
SGMS1-206ENST00000602565 MARVELD3Q96A59 401 aa15.69■□□□□ 0.1
SGMS1-206ENST00000602565 TTLL12Q14166 644 aaPredicted RBP15.68■□□□□ 0.1
SGMS1-206ENST00000602565 TMEM132AQ24JP5 1023 aa15.68■□□□□ 0.1
SGMS1-206ENST00000602565 OATP04181 439 aa15.68■□□□□ 0.1
SGMS1-206ENST00000602565 KDM4CQ9H3R0 1056 aa15.68■□□□□ 0.1
SGMS1-206ENST00000602565 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
SGMS1-206ENST00000602565 FAM205CA6NFA0 338 aa15.64■□□□□ 0.09
SGMS1-206ENST00000602565 TTC13Q8NBP0 860 aa15.64■□□□□ 0.09
SGMS1-206ENST00000602565 ADGRG1Q9Y653 693 aa15.64■□□□□ 0.09
SGMS1-206ENST00000602565 METTL3Q86U44 580 aaKnown RBP15.62■□□□□ 0.09
SGMS1-206ENST00000602565 PARP9Q8IXQ6 854 aa15.62■□□□□ 0.09
SGMS1-206ENST00000602565 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
SGMS1-206ENST00000602565 DAXXQ9UER7 740 aaPredicted RBP15.61■□□□□ 0.09
SGMS1-206ENST00000602565 TRIM6-TRIM34B2RNG4 842 aa15.6■□□□□ 0.09
SGMS1-206ENST00000602565 ARHGAP33O14559 1287 aa15.6■□□□□ 0.09
SGMS1-206ENST00000602565 NBPF26B4DH59 902 aa15.59■□□□□ 0.09
SGMS1-206ENST00000602565 PSEN2P49810 448 aa15.59■□□□□ 0.09
SGMS1-206ENST00000602565 PACS2Q86VP3 889 aa15.59■□□□□ 0.09
SGMS1-206ENST00000602565 TSKSQ9UJT2 592 aa15.59■□□□□ 0.09
SGMS1-206ENST00000602565 CLCN1P35523 988 aa15.58■□□□□ 0.08
SGMS1-206ENST00000602565 MDM2Q00987 491 aaPredicted RBP15.58■□□□□ 0.08
SGMS1-206ENST00000602565 PXYLP1Q8TE99 480 aa15.58■□□□□ 0.08
SGMS1-206ENST00000602565 FAM198AQ9UFP1 575 aa15.57■□□□□ 0.08
SGMS1-206ENST00000602565 PBX2P40425 430 aa15.56■□□□□ 0.08
SGMS1-206ENST00000602565 PROX2Q3B8N5 592 aa15.56■□□□□ 0.08
SGMS1-206ENST00000602565 PHOX2BQ99453 314 aa15.56■□□□□ 0.08
SGMS1-206ENST00000602565 GPCPD1Q9NPB8 672 aa15.56■□□□□ 0.08
SGMS1-206ENST00000602565 GIGYF2Q6Y7W6 1299 aaKnown RBP15.55■□□□□ 0.08
SGMS1-206ENST00000602565 ZNF687Q8N1G0 1237 aa15.55■□□□□ 0.08
SGMS1-206ENST00000602565 PNMA3Q9UL41 463 aa15.55■□□□□ 0.08
SGMS1-206ENST00000602565 NUDT18Q6ZVK8 323 aa15.54■□□□□ 0.08
SGMS1-206ENST00000602565 HS3ST6Q96QI5 342 aa15.54■□□□□ 0.08
SGMS1-206ENST00000602565 AXIN2Q9Y2T1 843 aa15.54■□□□□ 0.08
SGMS1-206ENST00000602565 IL27Q8NEV9 243 aa15.53■□□□□ 0.08
SGMS1-206ENST00000602565 ZBED2Q9BTP6 218 aa15.53■□□□□ 0.08
SGMS1-206ENST00000602565 ONECUT3O60422 494 aaPredicted RBP15.52■□□□□ 0.08
SGMS1-206ENST00000602565 TATDN2Q93075 761 aa15.52■□□□□ 0.08
SGMS1-206ENST00000602565 CDAN1Q8IWY9 1227 aa15.51■□□□□ 0.07
SGMS1-206ENST00000602565 NLRP7Q8WX94 980 aa15.51■□□□□ 0.07
SGMS1-206ENST00000602565 POTEEQ6S8J3 1075 aa15.5■□□□□ 0.07
SGMS1-206ENST00000602565 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
SGMS1-206ENST00000602565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.49■□□□□ 0.07
SGMS1-206ENST00000602565 KIAA1468Q9P260 1216 aa15.49■□□□□ 0.07
SGMS1-206ENST00000602565 DMRTA1Q5VZB9 504 aa15.48■□□□□ 0.07
SGMS1-206ENST00000602565 EYA1Q99502 592 aa15.48■□□□□ 0.07
SGMS1-206ENST00000602565 REPIN1Q9BWE0 567 aaKnown RBP15.48■□□□□ 0.07
SGMS1-206ENST00000602565 FAM117AQ9C073 453 aa15.48■□□□□ 0.07
SGMS1-206ENST00000602565 RCCD1A6NED2 376 aa15.47■□□□□ 0.07
SGMS1-206ENST00000602565 SLC4A5Q9BY07 1137 aa15.46■□□□□ 0.07
SGMS1-206ENST00000602565 SMAPO00193 183 aa15.45■□□□□ 0.06
SGMS1-206ENST00000602565 DNAJB2P25686 324 aa15.45■□□□□ 0.06
SGMS1-206ENST00000602565 TMUB1Q9BVT8 246 aa15.45■□□□□ 0.06
SGMS1-206ENST00000602565 RABGEF1Q9UJ41 708 aa15.45■□□□□ 0.06
SGMS1-206ENST00000602565 C3orf80F5H4A9 247 aa15.43■□□□□ 0.06
SGMS1-206ENST00000602565 MS4A1P11836 297 aa15.43■□□□□ 0.06
SGMS1-206ENST00000602565 SSTR3P32745 418 aaPredicted RBP15.43■□□□□ 0.06
SGMS1-206ENST00000602565 POTEB3A0JP26 581 aa15.43■□□□□ 0.06
SGMS1-206ENST00000602565 POTEBQ6S5H4 581 aa15.43■□□□□ 0.06
SGMS1-206ENST00000602565 FAM217BQ9NTX9 383 aaPredicted RBP15.41■□□□□ 0.06
SGMS1-206ENST00000602565 VPS9D1Q9Y2B5 631 aa15.41■□□□□ 0.06
SGMS1-206ENST00000602565 SEPT9Q9UHD8 586 aaPredicted RBP15.39■□□□□ 0.05
SGMS1-206ENST00000602565 GTF3C3Q9Y5Q9 886 aa15.39■□□□□ 0.05
SGMS1-206ENST00000602565 NBPF3Q9H094 633 aa15.38■□□□□ 0.05
SGMS1-206ENST00000602565 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
SGMS1-206ENST00000602565 TMEM134Q9H6X4 195 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms