RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 CUX2O14529 1486 aa14.54□□□□□ -0.08
LINC00343-209ENST00000601607 SPDYE16A6NNV3 312 aaPredicted RBP14.52□□□□□ -0.09
LINC00343-209ENST00000601607 PSEN2P49810 448 aa14.51□□□□□ -0.09
LINC00343-209ENST00000601607 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
LINC00343-209ENST00000601607 HCSTQ9UBK5 93 aa14.5□□□□□ -0.09
LINC00343-209ENST00000601607 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
LINC00343-209ENST00000601607 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
LINC00343-209ENST00000601607 DMRTA1Q5VZB9 504 aa14.49□□□□□ -0.09
LINC00343-209ENST00000601607 ZNF454Q8N9F8 522 aa14.49□□□□□ -0.09
LINC00343-209ENST00000601607 HRO43593 1189 aa14.47□□□□□ -0.09
LINC00343-209ENST00000601607 FOSBP53539 338 aa14.47□□□□□ -0.09
LINC00343-209ENST00000601607 KCNK17Q96T54 332 aa14.47□□□□□ -0.09
LINC00343-209ENST00000601607 DDX12PQ92771 950 aa14.46□□□□□ -0.09
LINC00343-209ENST00000601607 JPH4Q96JJ6 628 aa14.46□□□□□ -0.09
LINC00343-209ENST00000601607 STAC3Q96MF2 364 aa14.46□□□□□ -0.09
LINC00343-209ENST00000601607 BCL2L12Q9HB09 334 aa14.43□□□□□ -0.1
LINC00343-209ENST00000601607 PCDHGA10Q9Y5H3 936 aa14.42□□□□□ -0.1
LINC00343-209ENST00000601607 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
LINC00343-209ENST00000601607 PHF14O94880 888 aa14.41□□□□□ -0.1
LINC00343-209ENST00000601607 ZDHHC16Q969W1 377 aa14.4□□□□□ -0.1
LINC00343-209ENST00000601607 GRXCR2A6NFK2 248 aa14.39□□□□□ -0.11
LINC00343-209ENST00000601607 SLC4A5Q9BY07 1137 aa14.39□□□□□ -0.11
LINC00343-209ENST00000601607 PTPREP23469 700 aa14.38□□□□□ -0.11
LINC00343-209ENST00000601607 TYW1BQ6NUM6 668 aa14.37□□□□□ -0.11
LINC00343-209ENST00000601607 VPS9D1Q9Y2B5 631 aa14.37□□□□□ -0.11
LINC00343-209ENST00000601607 NBR1Q14596 966 aa14.36□□□□□ -0.11
LINC00343-209ENST00000601607 EPAS1Q99814 870 aa14.36□□□□□ -0.11
LINC00343-209ENST00000601607 ADAM33Q9BZ11 813 aa14.36□□□□□ -0.11
LINC00343-209ENST00000601607 SEMA3EO15041 775 aa14.35□□□□□ -0.11
LINC00343-209ENST00000601607 FBXW7Q969H0 707 aa14.35□□□□□ -0.11
LINC00343-209ENST00000601607 MLLT3P42568 568 aaPredicted RBP14.34□□□□□ -0.11
LINC00343-209ENST00000601607 PLA2G2EQ9NZK7 142 aa14.34□□□□□ -0.11
LINC00343-209ENST00000601607 RBM33Q96EV2 1170 aaKnown RBP14.33□□□□□ -0.12
LINC00343-209ENST00000601607 KCTD12Q96CX2 325 aaKnown RBP14.32□□□□□ -0.12
LINC00343-209ENST00000601607 OSBPP22059 807 aa14.28□□□□□ -0.12
LINC00343-209ENST00000601607 EN1Q05925 392 aaPredicted RBP14.28□□□□□ -0.12
LINC00343-209ENST00000601607 MAP3K7O43318 606 aa14.27□□□□□ -0.13
LINC00343-209ENST00000601607 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.13
LINC00343-209ENST00000601607 ZBED2Q9BTP6 218 aa14.27□□□□□ -0.13
LINC00343-209ENST00000601607 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
LINC00343-209ENST00000601607 C6orf132Q5T0Z8 1188 aa14.25□□□□□ -0.13
LINC00343-209ENST00000601607 BHMG1C9JSJ3 638 aaPredicted RBP14.23□□□□□ -0.13
LINC00343-209ENST00000601607 TSR1Q2NL82 804 aaKnown RBP14.23□□□□□ -0.13
LINC00343-209ENST00000601607 NBPF3Q9H094 633 aa14.23□□□□□ -0.13
LINC00343-209ENST00000601607 GOLGA8CPA6NN73 597 aa14.22□□□□□ -0.13
LINC00343-209ENST00000601607 MRPL50Q8N5N7 158 aaKnown RBP14.21□□□□□ -0.13
LINC00343-209ENST00000601607 PPP1R3GB7ZBB8 358 aa14.2□□□□□ -0.14
LINC00343-209ENST00000601607 COL9A1P20849 921 aa14.2□□□□□ -0.14
LINC00343-209ENST00000601607 SMYD5Q6GMV2 418 aa14.19□□□□□ -0.14
LINC00343-209ENST00000601607 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
LINC00343-209ENST00000601607 PTPN5P54829 565 aa14.16□□□□□ -0.14
LINC00343-209ENST00000601607 THSD4Q6ZMP0 1018 aa14.16□□□□□ -0.14
LINC00343-209ENST00000601607 CDHR5Q9HBB8 845 aa14.16□□□□□ -0.14
LINC00343-209ENST00000601607 NESP48681 1621 aa14.15□□□□□ -0.14
LINC00343-209ENST00000601607 WNT2BQ93097 391 aa14.15□□□□□ -0.14
LINC00343-209ENST00000601607 RBM26Q5T8P6 1007 aaKnown RBP14.12□□□□□ -0.15
LINC00343-209ENST00000601607 RABGEF1Q9UJ41 708 aa14.12□□□□□ -0.15
LINC00343-209ENST00000601607 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
LINC00343-209ENST00000601607 PROX2Q3B8N5 592 aa14.11□□□□□ -0.15
LINC00343-209ENST00000601607 TULP1O00294 542 aaPredicted RBP14.09□□□□□ -0.15
LINC00343-209ENST00000601607 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
LINC00343-209ENST00000601607 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
LINC00343-209ENST00000601607 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
LINC00343-209ENST00000601607 LAPTM4BQ86VI4 370 aa14.06□□□□□ -0.16
LINC00343-209ENST00000601607 NPDC1Q9NQX5 325 aaPredicted RBP14.06□□□□□ -0.16
LINC00343-209ENST00000601607 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
LINC00343-209ENST00000601607 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
LINC00343-209ENST00000601607 ANKK1Q8NFD2 765 aa14.05□□□□□ -0.16
LINC00343-209ENST00000601607 PRSS12P56730 875 aa14.04□□□□□ -0.16
LINC00343-209ENST00000601607 CDCA7LQ96GN5 454 aa14.04□□□□□ -0.16
LINC00343-209ENST00000601607 TRIM6-TRIM34B2RNG4 842 aa14.03□□□□□ -0.16
LINC00343-209ENST00000601607 PTGDRQ13258 359 aa14.02□□□□□ -0.17
LINC00343-209ENST00000601607 KIAA1468Q9P260 1216 aa14.01□□□□□ -0.17
LINC00343-209ENST00000601607 TSKSQ9UJT2 592 aa14□□□□□ -0.17
LINC00343-209ENST00000601607 RGS20O76081 388 aa13.99□□□□□ -0.17
LINC00343-209ENST00000601607 FCHSD2O94868 740 aa13.99□□□□□ -0.17
LINC00343-209ENST00000601607 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
LINC00343-209ENST00000601607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC00343-209ENST00000601607 PACS2Q86VP3 889 aa13.98□□□□□ -0.17
LINC00343-209ENST00000601607 GPIHBP1Q8IV16 184 aa13.98□□□□□ -0.17
LINC00343-209ENST00000601607 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
LINC00343-209ENST00000601607 PADI6Q6TGC4 694 aa13.97□□□□□ -0.17
LINC00343-209ENST00000601607 FAM198AQ9UFP1 575 aa13.97□□□□□ -0.17
LINC00343-209ENST00000601607 NYAP1Q6ZVC0 841 aa13.96□□□□□ -0.17
LINC00343-209ENST00000601607 BCANQ96GW7 911 aa13.96□□□□□ -0.17
LINC00343-209ENST00000601607 RBM27Q9P2N5 1060 aaKnown RBP13.96□□□□□ -0.17
LINC00343-209ENST00000601607 LMOD2Q6P5Q4 547 aa13.95□□□□□ -0.18
LINC00343-209ENST00000601607 SOWAHBA6NEL2 793 aa13.94□□□□□ -0.18
LINC00343-209ENST00000601607 SEPT9Q9UHD8 586 aaPredicted RBP13.94□□□□□ -0.18
LINC00343-209ENST00000601607 GPR37O15354 613 aa13.93□□□□□ -0.18
LINC00343-209ENST00000601607 HIC1Q14526 733 aa13.93□□□□□ -0.18
LINC00343-209ENST00000601607 ZFRQ96KR1 1074 aaKnown RBP13.93□□□□□ -0.18
LINC00343-209ENST00000601607 TTC13Q8NBP0 860 aa13.92□□□□□ -0.18
LINC00343-209ENST00000601607 A0A0G2JS52 829 aa13.91□□□□□ -0.18
LINC00343-209ENST00000601607 FAM98CQ17RN3 349 aaKnown RBP13.91□□□□□ -0.18
LINC00343-209ENST00000601607 NBPF26B4DH59 902 aa13.9□□□□□ -0.18
LINC00343-209ENST00000601607 C3orf80F5H4A9 247 aa13.9□□□□□ -0.18
LINC00343-209ENST00000601607 SMAPO00193 183 aa13.89□□□□□ -0.19
LINC00343-209ENST00000601607 GNPATO15228 680 aa13.89□□□□□ -0.19
LINC00343-209ENST00000601607 BCAMP50895 628 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms