RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 RAB3GAP2Q9H2M9 1393 aa14.67□□□□□ -0.06
SCN8A-208ENST00000599343 CARMIL1Q5VZK9 1371 aa14.66□□□□□ -0.06
SCN8A-208ENST00000599343 MARCH6O60337 910 aa14.66□□□□□ -0.06
SCN8A-208ENST00000599343 H3BQV1 296 aa14.66□□□□□ -0.06
SCN8A-208ENST00000599343 IFFO2Q5TF58 517 aa14.66□□□□□ -0.06
SCN8A-208ENST00000599343 RILPL2Q969X0 211 aa14.66□□□□□ -0.06
SCN8A-208ENST00000599343 LTV1Q96GA3 475 aaPredicted RBP14.66□□□□□ -0.06
SCN8A-208ENST00000599343 NUP155O75694 1391 aa14.66□□□□□ -0.06
SCN8A-208ENST00000599343 TPD52L1Q16890 204 aaPredicted RBP14.66□□□□□ -0.06
SCN8A-208ENST00000599343 DDX49Q9Y6V7 483 aaKnown RBP14.65□□□□□ -0.06
SCN8A-208ENST00000599343 SOGA1O94964 1423 aa14.65□□□□□ -0.06
SCN8A-208ENST00000599343 G3V3G9 751 aa14.64□□□□□ -0.07
SCN8A-208ENST00000599343 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
SCN8A-208ENST00000599343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.64□□□□□ -0.07
SCN8A-208ENST00000599343 EIF3AQ14152 1382 aaKnown RBP14.64□□□□□ -0.07
SCN8A-208ENST00000599343 PLIN1O60240 522 aa14.64□□□□□ -0.07
SCN8A-208ENST00000599343 BCL2L13Q9BXK5 485 aa14.63□□□□□ -0.07
SCN8A-208ENST00000599343 RB1CC1Q8TDY2 1594 aa14.63□□□□□ -0.07
SCN8A-208ENST00000599343 CUX2O14529 1486 aa14.63□□□□□ -0.07
SCN8A-208ENST00000599343 FRAT2O75474 233 aaPredicted RBP14.63□□□□□ -0.07
SCN8A-208ENST00000599343 PATL2C9JE40 543 aaKnown RBP14.63□□□□□ -0.07
SCN8A-208ENST00000599343 ANKRD45Q5TZF3 282 aa14.62□□□□□ -0.07
SCN8A-208ENST00000599343 VSIG10Q8N0Z9 540 aa14.62□□□□□ -0.07
SCN8A-208ENST00000599343 ZNF592Q92610 1267 aa14.62□□□□□ -0.07
SCN8A-208ENST00000599343 GOLGA6L19H0YKK7 550 aa14.62□□□□□ -0.07
SCN8A-208ENST00000599343 HDAC5Q9UQL6 1122 aa14.62□□□□□ -0.07
SCN8A-208ENST00000599343 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
SCN8A-208ENST00000599343 SETQ01105 290 aaPredicted RBP14.62□□□□□ -0.07
SCN8A-208ENST00000599343 FAM184AQ8NB25 1140 aa14.62□□□□□ -0.07
SCN8A-208ENST00000599343 TERF2IPQ9NYB0 399 aa14.62□□□□□ -0.07
SCN8A-208ENST00000599343 PDE4AP27815 886 aa14.61□□□□□ -0.07
SCN8A-208ENST00000599343 WWC1Q8IX03 1113 aa14.61□□□□□ -0.07
SCN8A-208ENST00000599343 CHMP4AQ9BY43 222 aa14.61□□□□□ -0.07
SCN8A-208ENST00000599343 USP35Q9P2H5 1018 aa14.61□□□□□ -0.07
SCN8A-208ENST00000599343 RSPH6AQ9H0K4 717 aa14.61□□□□□ -0.07
SCN8A-208ENST00000599343 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
SCN8A-208ENST00000599343 NLRP13Q86W25 1043 aa14.61□□□□□ -0.07
SCN8A-208ENST00000599343 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
SCN8A-208ENST00000599343 AMPHP49418 695 aa14.6□□□□□ -0.07
SCN8A-208ENST00000599343 GSE1Q14687 1217 aa14.6□□□□□ -0.07
SCN8A-208ENST00000599343 BECN2A8MW95 431 aa14.6□□□□□ -0.07
SCN8A-208ENST00000599343 FAM161AQ3B820 660 aa14.6□□□□□ -0.07
SCN8A-208ENST00000599343 TSR1Q2NL82 804 aaKnown RBP14.59□□□□□ -0.07
SCN8A-208ENST00000599343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.59□□□□□ -0.07
SCN8A-208ENST00000599343 PDE3BQ13370 1112 aa14.59□□□□□ -0.07
SCN8A-208ENST00000599343 LMOD3Q0VAK6 560 aa14.59□□□□□ -0.07
SCN8A-208ENST00000599343 MCTP1Q6DN14 999 aa14.59□□□□□ -0.07
SCN8A-208ENST00000599343 L3MBTL2Q969R5 705 aa14.59□□□□□ -0.07
SCN8A-208ENST00000599343 ZNF771Q7L3S4 317 aaPredicted RBP14.59□□□□□ -0.07
SCN8A-208ENST00000599343 NGDNQ8NEJ9 315 aaKnown RBP14.59□□□□□ -0.07
SCN8A-208ENST00000599343 EXOC6Q8TAG9 804 aa14.58□□□□□ -0.07
SCN8A-208ENST00000599343 CENPQQ7L2Z9 268 aaPredicted RBP14.58□□□□□ -0.08
SCN8A-208ENST00000599343 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
SCN8A-208ENST00000599343 CRBNQ96SW2 442 aa14.57□□□□□ -0.08
SCN8A-208ENST00000599343 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
SCN8A-208ENST00000599343 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
SCN8A-208ENST00000599343 SKOR2Q2VWA4 1001 aaPredicted RBP14.55□□□□□ -0.08
SCN8A-208ENST00000599343 ANKRD30AQ9BXX3 1397 aa14.55□□□□□ -0.08
SCN8A-208ENST00000599343 AKAP17AQ02040 695 aaKnown RBP14.55□□□□□ -0.08
SCN8A-208ENST00000599343 KIF3BO15066 747 aa14.54□□□□□ -0.08
SCN8A-208ENST00000599343 TPM1P09493 284 aa14.54□□□□□ -0.08
SCN8A-208ENST00000599343 TPM2P07951 284 aa14.54□□□□□ -0.08
SCN8A-208ENST00000599343 TRAK1Q9UPV9 953 aa14.54□□□□□ -0.08
SCN8A-208ENST00000599343 PCMTD1Q96MG8 357 aaPredicted RBP14.54□□□□□ -0.08
SCN8A-208ENST00000599343 COG6Q9Y2V7 657 aa14.54□□□□□ -0.08
SCN8A-208ENST00000599343 ATP6V1DQ9Y5K8 247 aa14.54□□□□□ -0.08
SCN8A-208ENST00000599343 KIF15Q9NS87 1388 aa14.53□□□□□ -0.08
SCN8A-208ENST00000599343 MYBBP1AQ9BQG0 1328 aaKnown RBP14.53□□□□□ -0.08
SCN8A-208ENST00000599343 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.08
SCN8A-208ENST00000599343 RRP1P56182 461 aaKnown RBP14.53□□□□□ -0.08
SCN8A-208ENST00000599343 PANK3Q9H999 370 aa14.53□□□□□ -0.08
SCN8A-208ENST00000599343 GPS2Q13227 327 aa14.52□□□□□ -0.08
SCN8A-208ENST00000599343 CCDC70Q6NSX1 233 aa14.52□□□□□ -0.08
SCN8A-208ENST00000599343 DIAPH3Q9NSV4 1193 aa14.52□□□□□ -0.08
SCN8A-208ENST00000599343 FBXW7Q969H0 707 aa14.52□□□□□ -0.09
SCN8A-208ENST00000599343 FAM13BQ9NYF5 915 aa14.52□□□□□ -0.09
SCN8A-208ENST00000599343 ZKSCAN2Q63HK3 967 aa14.51□□□□□ -0.09
SCN8A-208ENST00000599343 NGEFQ8N5V2 710 aa14.51□□□□□ -0.09
SCN8A-208ENST00000599343 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
SCN8A-208ENST00000599343 PHLDB1Q86UU1 1377 aa14.51□□□□□ -0.09
SCN8A-208ENST00000599343 RAD21O60216 631 aa14.51□□□□□ -0.09
SCN8A-208ENST00000599343 ANO2Q9NQ90 1003 aa14.51□□□□□ -0.09
SCN8A-208ENST00000599343 SYNE3Q6ZMZ3 975 aa14.5□□□□□ -0.09
SCN8A-208ENST00000599343 BCL11BQ9C0K0 894 aaPredicted RBP14.5□□□□□ -0.09
SCN8A-208ENST00000599343 EFCAB2Q5VUJ9 269 aa14.49□□□□□ -0.09
SCN8A-208ENST00000599343 HOMER1Q86YM7 354 aa14.49□□□□□ -0.09
SCN8A-208ENST00000599343 NACADO15069 1562 aa14.48□□□□□ -0.09
SCN8A-208ENST00000599343 FOSBP53539 338 aa14.48□□□□□ -0.09
SCN8A-208ENST00000599343 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
SCN8A-208ENST00000599343 ST20-MTHFSA0A0A6YYL1 179 aa14.48□□□□□ -0.09
SCN8A-208ENST00000599343 BICD2Q8TD16 824 aa14.48□□□□□ -0.09
SCN8A-208ENST00000599343 BAZ1AQ9NRL2 1556 aaPredicted RBP14.48□□□□□ -0.09
SCN8A-208ENST00000599343 EIF2S2P20042 333 aaKnown RBP14.47□□□□□ -0.09
SCN8A-208ENST00000599343 TRIM29Q14134 588 aa14.47□□□□□ -0.09
SCN8A-208ENST00000599343 E9PSI1 815 aa14.47□□□□□ -0.09
SCN8A-208ENST00000599343 EID1Q9Y6B2 187 aa14.47□□□□□ -0.09
SCN8A-208ENST00000599343 CARMIL2Q6F5E8 1435 aa14.46□□□□□ -0.09
SCN8A-208ENST00000599343 C1orf141Q5JVX7 400 aa14.46□□□□□ -0.1
SCN8A-208ENST00000599343 WASHC2CQ9Y4E1 1318 aa14.45□□□□□ -0.1
SCN8A-208ENST00000599343 IPO7O95373 1038 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms