RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 DIP2CQ9Y2E4 1556 aa15.54■□□□□ 0.08
LINC00343-205ENST00000598229 NPATQ14207 1427 aa15.54■□□□□ 0.08
LINC00343-205ENST00000598229 C3P01024 1663 aa15.54■□□□□ 0.08
LINC00343-205ENST00000598229 PKD2Q13563 968 aa15.53■□□□□ 0.08
LINC00343-205ENST00000598229 MYO5CQ9NQX4 1742 aa15.53■□□□□ 0.08
LINC00343-205ENST00000598229 FMN1Q68DA7 1419 aa15.52■□□□□ 0.08
LINC00343-205ENST00000598229 ARHGAP5Q13017 1502 aa15.52■□□□□ 0.07
LINC00343-205ENST00000598229 TROQ12816 1431 aaPredicted RBP15.51■□□□□ 0.07
LINC00343-205ENST00000598229 ZNF335Q9H4Z2 1342 aaPredicted RBP15.51■□□□□ 0.07
LINC00343-205ENST00000598229 ATP1B4Q9UN42 357 aaPredicted RBP15.51■□□□□ 0.07
LINC00343-205ENST00000598229 NCKAP5LQ9HCH0 1330 aa15.5■□□□□ 0.07
LINC00343-205ENST00000598229 CAMSAP1Q5T5Y3 1602 aa15.49■□□□□ 0.07
LINC00343-205ENST00000598229 CLIP1P30622 1438 aa15.49■□□□□ 0.07
LINC00343-205ENST00000598229 ZMYM3Q14202 1370 aa15.49■□□□□ 0.07
LINC00343-205ENST00000598229 CD44P16070 742 aaKnown RBP15.48■□□□□ 0.07
LINC00343-205ENST00000598229 KIF14Q15058 1648 aa15.47■□□□□ 0.07
LINC00343-205ENST00000598229 ABCA6Q8N139 1617 aa15.47■□□□□ 0.07
LINC00343-205ENST00000598229 GABBR2O75899 941 aa15.47■□□□□ 0.07
LINC00343-205ENST00000598229 PLA2R1Q13018 1463 aa15.46■□□□□ 0.07
LINC00343-205ENST00000598229 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
LINC00343-205ENST00000598229 TCOF1Q13428 1488 aaKnown RBP15.43■□□□□ 0.06
LINC00343-205ENST00000598229 TOM1O60784 492 aa15.42■□□□□ 0.06
LINC00343-205ENST00000598229 HSPA1LP34931 641 aa15.42■□□□□ 0.06
LINC00343-205ENST00000598229 MROH2AA6NES4 1674 aa15.41■□□□□ 0.06
LINC00343-205ENST00000598229 ABCC1P33527 1531 aa15.41■□□□□ 0.06
LINC00343-205ENST00000598229 KIDINS220Q9ULH0 1771 aa15.39■□□□□ 0.05
LINC00343-205ENST00000598229 CLCN6P51797 869 aa15.39■□□□□ 0.05
LINC00343-205ENST00000598229 CDC42BPBQ9Y5S2 1711 aa15.39■□□□□ 0.05
LINC00343-205ENST00000598229 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
LINC00343-205ENST00000598229 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
LINC00343-205ENST00000598229 UBTFP17480 764 aaKnown RBP15.38■□□□□ 0.05
LINC00343-205ENST00000598229 SPAG9O60271 1321 aaKnown RBP15.38■□□□□ 0.05
LINC00343-205ENST00000598229 MED1Q15648 1581 aaPredicted RBP15.36■□□□□ 0.05
LINC00343-205ENST00000598229 PREX2Q70Z35 1606 aa15.35■□□□□ 0.05
LINC00343-205ENST00000598229 PIP4K2BP78356 416 aa15.35■□□□□ 0.05
LINC00343-205ENST00000598229 ZNF142P52746 1687 aaPredicted RBP15.35■□□□□ 0.05
LINC00343-205ENST00000598229 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
LINC00343-205ENST00000598229 SAMD9LQ8IVG5 1584 aa15.34■□□□□ 0.05
LINC00343-205ENST00000598229 CEP170BQ9Y4F5 1589 aaPredicted RBP15.34■□□□□ 0.05
LINC00343-205ENST00000598229 CPS1P31327 1500 aa15.33■□□□□ 0.05
LINC00343-205ENST00000598229 KIAA1107Q9UPP5 1409 aa15.32■□□□□ 0.04
LINC00343-205ENST00000598229 A2ML1A8K2U0 1454 aa15.32■□□□□ 0.04
LINC00343-205ENST00000598229 MYO3AQ8NEV4 1616 aa15.32■□□□□ 0.04
LINC00343-205ENST00000598229 HNRNPMP52272 730 aaKnown RBP eCLIP15.31■□□□□ 0.04
LINC00343-205ENST00000598229 GGT6Q6P531 493 aa15.31■□□□□ 0.04
LINC00343-205ENST00000598229 CCDC18Q5T9S5 1454 aa15.31■□□□□ 0.04
LINC00343-205ENST00000598229 SHANK2Q9UPX8 1470 aa15.31■□□□□ 0.04
LINC00343-205ENST00000598229 A2MP01023 1474 aa15.3■□□□□ 0.04
LINC00343-205ENST00000598229 ZNF777Q9ULD5 760 aaPredicted RBP15.3■□□□□ 0.04
LINC00343-205ENST00000598229 CASKIN1Q8WXD9 1431 aa15.29■□□□□ 0.04
LINC00343-205ENST00000598229 PROM2Q8N271 834 aa15.29■□□□□ 0.04
LINC00343-205ENST00000598229 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
LINC00343-205ENST00000598229 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.04
LINC00343-205ENST00000598229 ANKLE2Q86XL3 938 aa15.27■□□□□ 0.04
LINC00343-205ENST00000598229 CLTCQ00610 1675 aaKnown RBP15.27■□□□□ 0.03
LINC00343-205ENST00000598229 ATP7AQ04656 1500 aa15.27■□□□□ 0.03
LINC00343-205ENST00000598229 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.03
LINC00343-205ENST00000598229 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
LINC00343-205ENST00000598229 ZRANB1Q9UGI0 708 aa15.26■□□□□ 0.03
LINC00343-205ENST00000598229 SUPT6HQ7KZ85 1726 aaKnown RBP15.26■□□□□ 0.03
LINC00343-205ENST00000598229 LRRIQ1Q96JM4 1722 aa15.26■□□□□ 0.03
LINC00343-205ENST00000598229 DNMT1P26358 1616 aaKnown RBP15.25■□□□□ 0.03
LINC00343-205ENST00000598229 THEMISQ8N1K5 641 aaPredicted RBP15.25■□□□□ 0.03
LINC00343-205ENST00000598229 CFDP1Q9UEE9 299 aaPredicted RBP15.25■□□□□ 0.03
LINC00343-205ENST00000598229 SYCP2Q9BX26 1530 aa15.25■□□□□ 0.03
LINC00343-205ENST00000598229 CDC42BPAQ5VT25 1732 aa15.25■□□□□ 0.03
LINC00343-205ENST00000598229 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
LINC00343-205ENST00000598229 TNRQ92752 1358 aa15.23■□□□□ 0.03
LINC00343-205ENST00000598229 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
LINC00343-205ENST00000598229 NEURL4Q96JN8 1562 aa15.21■□□□□ 0.03
LINC00343-205ENST00000598229 FBXO31Q5XUX0 539 aaPredicted RBP15.21■□□□□ 0.03
LINC00343-205ENST00000598229 MED14O60244 1454 aa15.2■□□□□ 0.02
LINC00343-205ENST00000598229 DHX29Q7Z478 1369 aaKnown RBP15.2■□□□□ 0.02
LINC00343-205ENST00000598229 VWDEQ8N2E2 1590 aa15.19■□□□□ 0.02
LINC00343-205ENST00000598229 RTEL1-TNFRSF6BF6WH68 1400 aa15.19■□□□□ 0.02
LINC00343-205ENST00000598229 ALKQ9UM73 1620 aa15.19■□□□□ 0.02
LINC00343-205ENST00000598229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.19■□□□□ 0.02
LINC00343-205ENST00000598229 CCNB3Q8WWL7 1395 aa15.18■□□□□ 0.02
LINC00343-205ENST00000598229 NPHP4O75161 1426 aaPredicted RBP15.17■□□□□ 0.02
LINC00343-205ENST00000598229 MIA2Q96PC5 1412 aa15.17■□□□□ 0.02
LINC00343-205ENST00000598229 PZPP20742 1482 aa15.17■□□□□ 0.02
LINC00343-205ENST00000598229 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
LINC00343-205ENST00000598229 RGS17Q9UGC6 210 aaPredicted RBP15.17■□□□□ 0.02
LINC00343-205ENST00000598229 NLRP1Q9C000 1473 aa15.16■□□□□ 0.02
LINC00343-205ENST00000598229 POLR1AO95602 1720 aaPredicted RBP15.16■□□□□ 0.02
LINC00343-205ENST00000598229 FAM135AQ9P2D6 1515 aa15.16■□□□□ 0.02
LINC00343-205ENST00000598229 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
LINC00343-205ENST00000598229 DEPDC5O75140 1603 aa15.15■□□□□ 0.02
LINC00343-205ENST00000598229 KIF3BO15066 747 aa15.15■□□□□ 0.02
LINC00343-205ENST00000598229 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
LINC00343-205ENST00000598229 WASHC2CQ9Y4E1 1318 aa15.15■□□□□ 0.02
LINC00343-205ENST00000598229 MBD5Q9P267 1494 aa15.14■□□□□ 0.01
LINC00343-205ENST00000598229 LRRC7Q96NW7 1537 aa15.13■□□□□ 0.01
LINC00343-205ENST00000598229 DCBLD2Q96PD2 775 aa15.12■□□□□ 0.01
LINC00343-205ENST00000598229 ZNF644Q9H582 1327 aaPredicted RBP15.12■□□□□ 0.01
LINC00343-205ENST00000598229 UGGT1Q9NYU2 1555 aa15.11■□□□□ 0.01
LINC00343-205ENST00000598229 RSPH4AQ5TD94 716 aa15.11■□□□□ 0.01
LINC00343-205ENST00000598229 KDM5DQ9BY66 1539 aa15.11■□□□□ 0.01
LINC00343-205ENST00000598229 POTEIP0CG38 1075 aa15.09■□□□□ 0.01
LINC00343-205ENST00000598229 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms