RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 GLI2P10070 1586 aa16.96■□□□□ 0.31
NPC1-214ENST00000593280 MIER1Q8N108 512 aa16.96■□□□□ 0.3
NPC1-214ENST00000593280 HECW2Q9P2P5 1572 aa16.94■□□□□ 0.3
NPC1-214ENST00000593280 MYT1LQ9UL68 1186 aa16.93■□□□□ 0.3
NPC1-214ENST00000593280 CCDC144AA2RUR9 1427 aa16.91■□□□□ 0.3
NPC1-214ENST00000593280 E9PCH4 1651 aa16.91■□□□□ 0.3
NPC1-214ENST00000593280 TET3O43151 1660 aa16.91■□□□□ 0.3
NPC1-214ENST00000593280 PRDM15P57071 1507 aaPredicted RBP16.9■□□□□ 0.3
NPC1-214ENST00000593280 DIP2BQ9P265 1576 aa16.9■□□□□ 0.3
NPC1-214ENST00000593280 DHX29Q7Z478 1369 aaKnown RBP16.9■□□□□ 0.3
NPC1-214ENST00000593280 HIRIP3Q9BW71 556 aaPredicted RBP16.9■□□□□ 0.3
NPC1-214ENST00000593280 VWDEQ8N2E2 1590 aa16.9■□□□□ 0.3
NPC1-214ENST00000593280 MLH3Q9UHC1 1453 aa16.89■□□□□ 0.3
NPC1-214ENST00000593280 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
NPC1-214ENST00000593280 ATP10AO60312 1499 aa16.89■□□□□ 0.29
NPC1-214ENST00000593280 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
NPC1-214ENST00000593280 MROH1Q8NDA8 1641 aa16.89■□□□□ 0.29
NPC1-214ENST00000593280 KANK1Q14678 1352 aa16.88■□□□□ 0.29
NPC1-214ENST00000593280 RICTORQ6R327 1708 aa16.88■□□□□ 0.29
NPC1-214ENST00000593280 RNF17Q9BXT8 1623 aaKnown RBP16.87■□□□□ 0.29
NPC1-214ENST00000593280 SPHKAPQ2M3C7 1700 aa16.87■□□□□ 0.29
NPC1-214ENST00000593280 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
NPC1-214ENST00000593280 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
NPC1-214ENST00000593280 ABCA6Q8N139 1617 aa16.87■□□□□ 0.29
NPC1-214ENST00000593280 A2MP01023 1474 aa16.87■□□□□ 0.29
NPC1-214ENST00000593280 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
NPC1-214ENST00000593280 BCORL1Q5H9F3 1711 aa16.85■□□□□ 0.29
NPC1-214ENST00000593280 TRPM2O94759 1503 aa16.84■□□□□ 0.29
NPC1-214ENST00000593280 FRMPD1Q5SYB0 1578 aa16.84■□□□□ 0.29
NPC1-214ENST00000593280 KIF3BO15066 747 aa16.84■□□□□ 0.29
NPC1-214ENST00000593280 RALGAPBQ86X10 1494 aa16.83■□□□□ 0.29
NPC1-214ENST00000593280 DDX10Q13206 875 aaKnown RBP16.83■□□□□ 0.28
NPC1-214ENST00000593280 POLR1AO95602 1720 aaPredicted RBP16.83■□□□□ 0.28
NPC1-214ENST00000593280 CEP152O94986 1710 aa16.82■□□□□ 0.28
NPC1-214ENST00000593280 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
NPC1-214ENST00000593280 EFCAB6Q5THR3 1501 aa16.81■□□□□ 0.28
NPC1-214ENST00000593280 PPRC1Q5VV67 1664 aaKnown RBP16.81■□□□□ 0.28
NPC1-214ENST00000593280 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
NPC1-214ENST00000593280 TSPOAP1O95153 1857 aa16.8■□□□□ 0.28
NPC1-214ENST00000593280 KIF13AQ9H1H9 1805 aa16.8■□□□□ 0.28
NPC1-214ENST00000593280 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
NPC1-214ENST00000593280 FAM69CQ0P6D2 419 aa16.79■□□□□ 0.28
NPC1-214ENST00000593280 PTPRTO14522 1441 aa16.79■□□□□ 0.28
NPC1-214ENST00000593280 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
NPC1-214ENST00000593280 DCAF11Q8TEB1 546 aa16.78■□□□□ 0.28
NPC1-214ENST00000593280 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
NPC1-214ENST00000593280 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
NPC1-214ENST00000593280 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
NPC1-214ENST00000593280 ZMYM4Q5VZL5 1548 aa16.77■□□□□ 0.27
NPC1-214ENST00000593280 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
NPC1-214ENST00000593280 PRAG1Q86YV5 1406 aa16.76■□□□□ 0.27
NPC1-214ENST00000593280 USP47Q96K76 1375 aa16.75■□□□□ 0.27
NPC1-214ENST00000593280 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
NPC1-214ENST00000593280 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
NPC1-214ENST00000593280 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
NPC1-214ENST00000593280 LAMC1P11047 1609 aa16.72■□□□□ 0.27
NPC1-214ENST00000593280 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
NPC1-214ENST00000593280 YTHDC1Q96MU7 727 aaKnown RBP16.72■□□□□ 0.27
NPC1-214ENST00000593280 NEURL4Q96JN8 1562 aa16.72■□□□□ 0.27
NPC1-214ENST00000593280 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
NPC1-214ENST00000593280 ZC3H13Q5T200 1668 aaKnown RBP16.71■□□□□ 0.27
NPC1-214ENST00000593280 ABCC3O15438 1527 aa16.71■□□□□ 0.27
NPC1-214ENST00000593280 CAMSAP1Q5T5Y3 1602 aa16.71■□□□□ 0.27
NPC1-214ENST00000593280 KIF1BO60333 1816 aa16.71■□□□□ 0.27
NPC1-214ENST00000593280 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
NPC1-214ENST00000593280 ROCK2O75116 1388 aaKnown RBP16.7■□□□□ 0.26
NPC1-214ENST00000593280 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
NPC1-214ENST00000593280 MADDQ8WXG6 1647 aa16.69■□□□□ 0.26
NPC1-214ENST00000593280 ANP32CO43423 234 aa16.68■□□□□ 0.26
NPC1-214ENST00000593280 CNTLNQ9NXG0 1405 aa16.68■□□□□ 0.26
NPC1-214ENST00000593280 UGGT1Q9NYU2 1555 aa16.67■□□□□ 0.26
NPC1-214ENST00000593280 GGT6Q6P531 493 aa16.67■□□□□ 0.26
NPC1-214ENST00000593280 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
NPC1-214ENST00000593280 KIF7Q2M1P5 1343 aa16.66■□□□□ 0.26
NPC1-214ENST00000593280 GPRASP1Q5JY77 1395 aa16.65■□□□□ 0.26
NPC1-214ENST00000593280 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
NPC1-214ENST00000593280 REREQ9P2R6 1566 aa16.65■□□□□ 0.26
NPC1-214ENST00000593280 NPATQ14207 1427 aa16.65■□□□□ 0.26
NPC1-214ENST00000593280 IFT172Q9UG01 1749 aa16.64■□□□□ 0.25
NPC1-214ENST00000593280 WASHC2CQ9Y4E1 1318 aa16.63■□□□□ 0.25
NPC1-214ENST00000593280 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
NPC1-214ENST00000593280 ADGRB3O60242 1522 aa16.62■□□□□ 0.25
NPC1-214ENST00000593280 SIGLEC1Q9BZZ2 1709 aa16.62■□□□□ 0.25
NPC1-214ENST00000593280 ARID4BQ4LE39 1312 aaPredicted RBP16.61■□□□□ 0.25
NPC1-214ENST00000593280 KIAA1210Q9ULL0 1709 aa16.61■□□□□ 0.25
NPC1-214ENST00000593280 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
NPC1-214ENST00000593280 CCER2I3L3R5 266 aa16.6■□□□□ 0.25
NPC1-214ENST00000593280 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
NPC1-214ENST00000593280 MYOM2P54296 1465 aa16.6■□□□□ 0.25
NPC1-214ENST00000593280 NBPF1Q3BBV0 1214 aa16.59■□□□□ 0.25
NPC1-214ENST00000593280 IQGAP1P46940 1657 aa16.59■□□□□ 0.25
NPC1-214ENST00000593280 AGLP35573 1532 aa16.58■□□□□ 0.25
NPC1-214ENST00000593280 ARHGAP31Q2M1Z3 1444 aa16.58■□□□□ 0.25
NPC1-214ENST00000593280 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
NPC1-214ENST00000593280 PIK3C2BO00750 1634 aa16.58■□□□□ 0.24
NPC1-214ENST00000593280 NOS1P29475 1434 aa16.57■□□□□ 0.24
NPC1-214ENST00000593280 SYNMO15061 1565 aa16.57■□□□□ 0.24
NPC1-214ENST00000593280 PPLO60437 1756 aa16.56■□□□□ 0.24
NPC1-214ENST00000593280 PREX1Q8TCU6 1659 aa16.56■□□□□ 0.24
NPC1-214ENST00000593280 COL17A1Q9UMD9 1497 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms