RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-212ENST00000593160 TEX14Q8IWB6 1497 aa18.48■□□□□ 0.55
CACNA1A-212ENST00000593160 MROH1Q8NDA8 1641 aa18.48■□□□□ 0.55
CACNA1A-212ENST00000593160 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
CACNA1A-212ENST00000593160 DHX29Q7Z478 1369 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-212ENST00000593160 BCORL1Q5H9F3 1711 aa18.47■□□□□ 0.55
CACNA1A-212ENST00000593160 PRDM15P57071 1507 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-212ENST00000593160 ZMYM4Q5VZL5 1548 aa18.47■□□□□ 0.55
CACNA1A-212ENST00000593160 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
CACNA1A-212ENST00000593160 PKD2Q13563 968 aa18.47■□□□□ 0.55
CACNA1A-212ENST00000593160 DIP2CQ9Y2E4 1556 aa18.46■□□□□ 0.55
CACNA1A-212ENST00000593160 RNF17Q9BXT8 1623 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-212ENST00000593160 A2MP01023 1474 aa18.45■□□□□ 0.54
CACNA1A-212ENST00000593160 TET3O43151 1660 aa18.41■□□□□ 0.54
CACNA1A-212ENST00000593160 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
CACNA1A-212ENST00000593160 E9PCH4 1651 aa18.41■□□□□ 0.54
CACNA1A-212ENST00000593160 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-212ENST00000593160 MYT1LQ9UL68 1186 aa18.4■□□□□ 0.54
CACNA1A-212ENST00000593160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
CACNA1A-212ENST00000593160 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-212ENST00000593160 ATP10AO60312 1499 aa18.37■□□□□ 0.53
CACNA1A-212ENST00000593160 PLA2R1Q13018 1463 aa18.37■□□□□ 0.53
CACNA1A-212ENST00000593160 YEATS2Q9ULM3 1422 aa18.36■□□□□ 0.53
CACNA1A-212ENST00000593160 CEP152O94986 1710 aa18.35■□□□□ 0.53
CACNA1A-212ENST00000593160 LMTK2Q8IWU2 1503 aa18.35■□□□□ 0.53
CACNA1A-212ENST00000593160 KIF3BO15066 747 aa18.34■□□□□ 0.53
CACNA1A-212ENST00000593160 SPHKAPQ2M3C7 1700 aa18.34■□□□□ 0.53
CACNA1A-212ENST00000593160 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.53
CACNA1A-212ENST00000593160 REREQ9P2R6 1566 aa18.33■□□□□ 0.53
CACNA1A-212ENST00000593160 COL17A1Q9UMD9 1497 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-212ENST00000593160 KANK1Q14678 1352 aa18.32■□□□□ 0.52
CACNA1A-212ENST00000593160 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
CACNA1A-212ENST00000593160 TRPM2O94759 1503 aa18.31■□□□□ 0.52
CACNA1A-212ENST00000593160 ARHGEF40Q8TER5 1519 aa18.3■□□□□ 0.52
CACNA1A-212ENST00000593160 CCDC144AA2RUR9 1427 aa18.29■□□□□ 0.52
CACNA1A-212ENST00000593160 PTPRTO14522 1441 aa18.28■□□□□ 0.52
CACNA1A-212ENST00000593160 ZC3H13Q5T200 1668 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-212ENST00000593160 ABCC3O15438 1527 aa18.27■□□□□ 0.52
CACNA1A-212ENST00000593160 CAMSAP1Q5T5Y3 1602 aa18.26■□□□□ 0.51
CACNA1A-212ENST00000593160 SIGLEC1Q9BZZ2 1709 aa18.26■□□□□ 0.51
CACNA1A-212ENST00000593160 CLTCL1P53675 1640 aa18.25■□□□□ 0.51
CACNA1A-212ENST00000593160 AGLP35573 1532 aa18.25■□□□□ 0.51
CACNA1A-212ENST00000593160 DNAJC5Q9H3Z4 198 aa18.25■□□□□ 0.51
CACNA1A-212ENST00000593160 UHRF1BP1Q6BDS2 1440 aa18.22■□□□□ 0.51
CACNA1A-212ENST00000593160 NBPF8Q3BBV2 869 aa18.21■□□□□ 0.51
CACNA1A-212ENST00000593160 NPATQ14207 1427 aa18.2■□□□□ 0.5
CACNA1A-212ENST00000593160 NEURL4Q96JN8 1562 aa18.2■□□□□ 0.5
CACNA1A-212ENST00000593160 SPATA31E1Q6ZUB1 1445 aa18.19■□□□□ 0.5
CACNA1A-212ENST00000593160 GGT6Q6P531 493 aa18.18■□□□□ 0.5
CACNA1A-212ENST00000593160 UGGT1Q9NYU2 1555 aa18.17■□□□□ 0.5
CACNA1A-212ENST00000593160 DIEXFQ68CQ4 756 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-212ENST00000593160 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
CACNA1A-212ENST00000593160 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
CACNA1A-212ENST00000593160 KIF1BO60333 1816 aa18.14■□□□□ 0.49
CACNA1A-212ENST00000593160 TRPM1Q7Z4N2 1603 aa18.14■□□□□ 0.49
CACNA1A-212ENST00000593160 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
CACNA1A-212ENST00000593160 MROH2AA6NES4 1674 aa18.14■□□□□ 0.49
CACNA1A-212ENST00000593160 CNTLNQ9NXG0 1405 aa18.13■□□□□ 0.49
CACNA1A-212ENST00000593160 PIK3C2BO00750 1634 aa18.13■□□□□ 0.49
CACNA1A-212ENST00000593160 SYNMO15061 1565 aa18.12■□□□□ 0.49
CACNA1A-212ENST00000593160 NOS1P29475 1434 aa18.12■□□□□ 0.49
CACNA1A-212ENST00000593160 PRAG1Q86YV5 1406 aa18.12■□□□□ 0.49
CACNA1A-212ENST00000593160 IFT172Q9UG01 1749 aa18.11■□□□□ 0.49
CACNA1A-212ENST00000593160 ADGRB3O60242 1522 aa18.11■□□□□ 0.49
CACNA1A-212ENST00000593160 DCAF11Q8TEB1 546 aa18.1■□□□□ 0.49
CACNA1A-212ENST00000593160 CLTCQ00610 1675 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-212ENST00000593160 PREX1Q8TCU6 1659 aa18.1■□□□□ 0.49
CACNA1A-212ENST00000593160 CFAP65Q6ZU64 1925 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-212ENST00000593160 MADDQ8WXG6 1647 aa18.1■□□□□ 0.49
CACNA1A-212ENST00000593160 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
CACNA1A-212ENST00000593160 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
CACNA1A-212ENST00000593160 LAMC1P11047 1609 aa18.07■□□□□ 0.48
CACNA1A-212ENST00000593160 HIRIP3Q9BW71 556 aaPredicted RBP18.06■□□□□ 0.48
CACNA1A-212ENST00000593160 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
CACNA1A-212ENST00000593160 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
CACNA1A-212ENST00000593160 POLR1AO95602 1720 aaPredicted RBP18.05■□□□□ 0.48
CACNA1A-212ENST00000593160 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
CACNA1A-212ENST00000593160 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
CACNA1A-212ENST00000593160 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
CACNA1A-212ENST00000593160 MYOM2P54296 1465 aa18.03■□□□□ 0.48
CACNA1A-212ENST00000593160 PPLO60437 1756 aa18.02■□□□□ 0.48
CACNA1A-212ENST00000593160 GPRASP1Q5JY77 1395 aa18.02■□□□□ 0.48
CACNA1A-212ENST00000593160 ERVK-7P63135 1459 aa18.02■□□□□ 0.47
CACNA1A-212ENST00000593160 USP47Q96K76 1375 aa18.01■□□□□ 0.47
CACNA1A-212ENST00000593160 KIAA1210Q9ULL0 1709 aa18■□□□□ 0.47
CACNA1A-212ENST00000593160 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
CACNA1A-212ENST00000593160 NRXN1Q9ULB1 1477 aa17.98■□□□□ 0.47
CACNA1A-212ENST00000593160 STAC3Q96MF2 364 aa17.98■□□□□ 0.47
CACNA1A-212ENST00000593160 ROCK2O75116 1388 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-212ENST00000593160 MYO5BQ9ULV0 1848 aa17.96■□□□□ 0.47
CACNA1A-212ENST00000593160 TMEM131LA2VDJ0 1609 aa17.96■□□□□ 0.47
CACNA1A-212ENST00000593160 IQGAP1P46940 1657 aa17.96■□□□□ 0.47
CACNA1A-212ENST00000593160 MLECQ14165 292 aa17.95■□□□□ 0.46
CACNA1A-212ENST00000593160 CARD11Q9BXL7 1154 aa17.95■□□□□ 0.46
CACNA1A-212ENST00000593160 NEXMIFQ5QGS0 1516 aa17.95■□□□□ 0.46
CACNA1A-212ENST00000593160 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
CACNA1A-212ENST00000593160 NBPF1Q3BBV0 1214 aa17.93■□□□□ 0.46
CACNA1A-212ENST00000593160 SLC52A1Q9NWF4 448 aa17.92■□□□□ 0.46
CACNA1A-212ENST00000593160 FBXO31Q5XUX0 539 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-212ENST00000593160 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms